Difference between revisions of "Os10g0323500"

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(Created page with "{{JaponicaGene| GeneName = Os10g0323500| Description = Similar to Beta-glucosidase| Version = NM_001070882.1 GI:115481507 GeneID:4348315| Length = 5906 bp| Definition = O...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0323500|
 
GeneName = Os10g0323500|

Revision as of 21:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0323500

Description

Similar to Beta-glucosidase

Version

NM_001070882.1 GI:115481507 GeneID:4348315

Length

5906 bp

Definition

Oryza sativa Japonica Group Os10g0323500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9117624..9123529

Sequence Coding Region

9117664..9117819,9119770..9119836,9120392..9120450,9120562..9120637,9120825..9120896
,9121033..9121120,9121196..9121451,9121641..9121756,9121954..9122177
,9122392..9122423,9122589..9122690,9122887..9122996,9123090..9123264

Expression

GEO Profiles:Os10g0323500

Genome Context

<gbrowseImage1> name=NC_008403:9117624..9123529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9117624..9123529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaatggagggcgatgcatggtggaggtggtgatacttcttgtgttgatggctatgtcgcaaggatgcgatgcgcagaatactaccggaggactgacgagaaagagcttccctaatggcttcgtctttggaaccgcttcatcggcttatcagtatgaaggtgctgtcaaggaggacggaagggggccaaccatttgggacaaattcgcacatacatttggaaagatcattgacttcagcaatgctgatgttgcagtggatcagtaccaccgtttcgaggaagatattcagcttatggcagacatggggatggatgcatatagattctcaatttcatggtctaggattttcccaaatggcactggtgaggtcaaccaggcaggcattgatcactacaacaagctaatcaacgcattactagctaaaggaattgaaccatatgtaacgctctatcactgggaccttccacaagctttggaggacaagtacactgggtggcttgacaggcagatcatcaatgattatgcggtatatgctgagacgtgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagccccacaccgtcgcggtgcaggcctatgacagcgggatgcatgcaccgggccgctgctcggtgctcctgcacctctactgcaagaaagggaattcaggcaccgagccctacatagttgctcataacatgatcctctcacatgccacggtttcagacatatacaggaagaaatacaaggcaagtcagaatggggagctggggatatcttttgatgttatatggtacgaaccaatgtcaaattccacagctgacattgaagccgccaagagagcacaggaattccagctaggatggtttgcggatcccttcttcttcggagattatccggcaacgatgagatcgagagtgggaagcaggctaccgaagttcacggagaaagaggctgcacttgtgaacggatcactggacttcatggggatcaatcactataccacattctacacaaaggatgaccaatctactgtaatagaaaaattgctgaacaacaccttggcagatactgcaaccatcagtgtccccttcagaaatggacagccaattggggatagggccaactcgatatggttgtacatcgtgcctcgtagcatgaggatcttgatgaactatgtcaaggacagatacaacaaaccaactgtctacataacagagaatggaatggatgatggcaacagccccttcatctctctgaagaatgccctcaaggacgacaagaggaccaaataccacaatgactatcttacaaacttagcagactccataagggaggatggttgtgatgttcgcgggtattttgcatggtctcttcttgacaactgggagtgggccgctggatacacctcgagattcggattatactacgtagactacaagaaccggaagagatacccaaagaattcagtgcagtggttcaagaatctcttggcatcctcctcttga</cdnaseq>

Protein Sequence

<aaseq>MGNGGRCMVEVVILLVLMAMSQGCDAQNTTGGLTRKSFPNGFVF GTASSAYQYEGAVKEDGRGPTIWDKFAHTFGKIIDFSNADVAVDQYHRFEEDIQLMAD MGMDAYRFSISWSRIFPNGTGEVNQAGIDHYNKLINALLAKGIEPYVTLYHWDLPQAL EDKYTGWLDRQIINDYAVYAETCFQAFGDRVKHWITFNEPHTVAVQAYDSGMHAPGRC SVLLHLYCKKGNSGTEPYIVAHNMILSHATVSDIYRKKYKASQNGELGISFDVIWYEP MSNSTADIEAAKRAQEFQLGWFADPFFFGDYPATMRSRVGSRLPKFTEKEAALVNGSL DFMGINHYTTFYTKDDQSTVIEKLLNNTLADTATISVPFRNGQPIGDRANSIWLYIVP RSMRILMNYVKDRYNKPTVYITENGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLAD SIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLAS SS</aaseq>

Gene Sequence

<dnaseqindica>41..196#2147..2213#2769..2827#2939..3014#3202..3273#3410..3497#3573..3828#4018..4133#4331..4554#4769..4800#4966..5067#5264..5373#5467..5641#tatttctccctctctccctctctttgtaacacaaaccaagatggggaatggagggcgatgcatggtggaggtggtgatacttcttgtgttgatggctatgtcgcaaggatgcgatgcgcagaatactaccggaggactgacgagaaagagcttccctaatggcttcgtctttggaaccgcttcatcggcttatcaggtttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcgactttgacacgtcatgatggtcttgggagaggtcattctctcatatactccctccatccaaaagttggcaaatgaaaaaaatcctggtacacggcaaatgaaaaacaatgtccagacaacggagttttttttaactaaaatatctctaaaaattaattagatcatactataataatattgttatgctggagaatcttgcattggctctgcccttggttcctggatgatcagttagcgcacagtttttttactagaacatatgatattttgtttctttttggagaccactagaatagaaggggtgatctatctgattaatttgtccatatatcatggtacatgagaaagagatttgaatatattttccatggcacctctgcaattgaactgttgcttcacatgcttttgagacgatatctagttggagagaacttggaaaagagtctgagctaaacaagaataaggcaaaagaacaagtggtagtgccttgctcccgtgatattaggatatgtgctttgtctttgtcatcaccgactctctcttcaatgcccttcttttgcttggaagtcatatggcagtttttaattagcagcagataaaaacggatatcaatattatgttaagcaccggccatgtataatcatctcaatgccaaaaaatccccccaaaaaaatctcaatgccaaaaaaaaagtcttctccttcatcgctttctttgcatatttataaggatggtgaaagcaatggacagattaataagccaggatgtacatgccctaattaattacaccaataatagaaaaatcataaattgatcataattgtgaatacacaggcatatataaactatttgctattaatattttttggataatgatcattgctatatatggctaacggttttgcaaaccagtatatacctaattaagtttggtaaaaacaaaaaagaaaaacatgcaaacaggataatcttaaagtgttgtaatggtccctgatacaatactaggagatattttggacatttaccttatttggaaaatctacaaatacaaaaaaaattgctgcaaacttcttacaaaatactggtggcaaattattattattgcaccttcaaattctataaactttcaactaaataaatcaaatggttgaggactaaatttccaactaatccaagctatatttaactaaatttcccatttcttcttcttcccatcttcttccccaaagtccaagcttccaccacagcagcactacgactatatttccctttattccagatgacacaaaatacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctagataaatatatatgtctagattcattaacattaatataaatgtggaaaatgctagaatgacctacattgtgaaacagatggagtaattatcttcgagtgtgtgttaggggtgtatttgtggtatgcattgtgagttttccgtctaatctccaaaagaaaaatgcagccaatgaagcgtgttctatgtttcctttttgcatgaactgtaaagtaactgttcaggtttgtgccctcctattttacatccttatattcttcatctttacctaagctatgttagaaaaatctctcctaaaaaagttgtgcgtgtatcctgtttcaagtgtatatctattacaccaatcgattggcaccgctcgctagaatgcttattttggctacacaaaagtactgatcataaataagtaaaacagttgaattcagtaatatccacgtttcaatttgactattaagatgattaatatttgtttcatattcacgcaaaaaaaatatttgtttcatatttatctatttttcctgcagtatgaaggtgctgtcaaggaggacggaagggggccaaccatttgggacaaattcgcacatacatttggtatcttttttcccaatcactgtaatcagtatttaatcatctctagtttcctcagggccaagtcaagcaggataaagattcagtaattatatttttaggtttgtaattctggtcgagaaacatacgtaatatatgtagtggtatacgactcaagatgcctatggattcttgatatatatctggctatccttgccttaccttgtttcttctactatcttagtactactgttactatcaatagttatgcctgcttcacgtatggaacaagcatctctcgactctcatgttgtataatttataggtcagatattcaaaacctgtatgcaattatgctaccacagattagatatttttctttgtcattacacttaatctcagtgttcctgattcgtacattctgggcatgtgtgaaaccatatagtaaatagctttgactattgacttggtcgaacatatggaataacaaagaaatcattaagagttgacctttgatcatgaaaattaatcacccatggttcaatattataagcaaatatttgccttacttattttcaggaaagatcattgacttcagcaatgctgatgttgcagtggatcagtaccaccgtttcgaggtagacaattggacactacactctaacacagaaagtgaaagtatatctatctattttttttgatcgagttcaaattttgagattactgtgcttgtcatatcaatatttcaggaagatattcagcttatggcagacatggggatggatgcatatagattctcaatttcatggtctaggattttcccaagtatgtaatataataattcattggttaatatgggtatttccacttgtatctcttcattattttgcatctttatgttaacttaatggtcacacataacctttgaagtttttcttcattatgaaatgttttatctgtggataaacagacctgcactactaacaataatcatatctgcactcttattcagatggcactggtgaggtcaaccaggcaggcattgatcactacaacaagctaatcaacgcattactagctaaaggtggacactaaaattgactccccaaaacctacaaattgaaatgtttgagctaactacttattaaaacataggtttaattcactactgaatctaaagttttcttaaattttactgacaagttgaacatctcccctaggaattgaaccatatgtaacgctctatcactgggaccttccacaagctttggaggacaagtacactgggtggcttgacaggcagatcatgtaagcattgcaaacttctcatgcagttacaatggctattcgatctgtaacagaagtaccatgatcttgttgcagcaatgattatgcggtatatgctgagacgtgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagccccacaccgtcgcggtgcaggcctatgacagcgggatgcatgcaccgggccgctgctcggtgctcctgcacctctactgcaagaaagggaattcaggcaccgagccctacatagttgctcataacatgatcctctcacatgccacggtttcagacatatacaggaagaaatacaaggtaggtgaacaattcttctgcatatagttcaggcttctgtaactgtaagcatgatgtatgtgctgctttgatattgcaatgctttctcaagtcaatcctgcatgaagatttgtccatagatcattttcagtgttcagtacgtaattcggtaacacaatgatgcaaaggtaaagctttcatgtttttcaggcaagtcagaatggggagctggggatatcttttgatgttatatggtacgaaccaatgtcaaattccacagctgacattgaagccgccaagagagcacaggaattccagctaggatggtaaggttcacaactcacaagcttcatattttcttgcaaattccacagctgtgagacattcagtaccactactgtgacaaaatggacagaaccattgcactctgttctgtaactactgtagtttttcctttgtactcaaccctgtactgaattttgatagaaccaccattgatgaaatgctcaatttggtatggaaggtttgcggatcccttcttcttcggagattatccggcaacgatgagatcgagagtgggaagcaggctaccgaagttcacggagaaagaggctgcacttgtgaacggatcactggacttcatggggatcaatcactataccacattctacacaaaggatgaccaatctactgtaatagaaaaattgctgaacaacaccttggcagatactgcaaccatcagtgtccgtaagttccacttttcattcacactgttttctgaataataagagaactaaatgataaaaagcacaaagcacacaactgggctaactacttctcagattgcttgtgctatgagaaaactagtcgcccattgtgttctttttgcaagtttggatgattaaatttgaaaaattagctagctcatgactaattcatttctcatgcctgcatttttcagccttcagaaatggacagccaattggggatagggtaattaattctgcaacattacatccttctcatgtgaaaataaaattgacattaatatttttttcttttgttgttaatttactgcaagatttgaaaaccttgatttgtaaaactgaacttggtttctgaactgactgagcatatgactgttgattcgccatgcaggccaactcgatatggttgtacatcgtgcctcgtagcatgaggatcttgatgaactatgtcaaggacagatacaacaaaccaactgtctacataacagagaatggcaagtgtacttacgttatttgtgatttgttcctgtatgcttaaaacaaatactacagtaataaaaaatgtcaaacataaaaattgcttcaagtttaacataacaaagtataatctttcgaataaaattttcattgaagtttcctcgcaagaacaaaaactcaagtaatataatagattcccttcttttgcctcaggaatggatgatggcaacagccccttcatctctctgaagaatgccctcaaggacgacaagaggaccaaataccacaatgactatcttacaaacttagcagactccataaggtgcttaaacaatgacacaattgaactttcggttatgagtcgaggactaattttccctgttatggttgacactctaataactttattatgcagggaggatggttgtgatgttcgcgggtattttgcatggtctcttcttgacaactgggagtgggccgctggatacacctcgagattcggattatactacgtagactacaagaaccggaagagatacccaaagaattcagtgcagtggttcaagaatctcttggcatcctcctcttgatcaaattgagtcgcctatatatcaagatgccttgatcattgctaccctactactacctagttgtgatttatacacgcaggattgcataccgagcagtgaccattcatgtattcattgattgtataaagagatatcatgcatggacttgttgtacataattcataatattcttgcaccaaaaactgaataaacacagattgtaataataaaatagatacattttgatgctacaagaaaaaggcgcacatttggtctgattttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0323500, RefSeq:Os10g0323500