Difference between revisions of "Os10g0351414"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0351414| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001189171.1 GI:297727472 GeneID:9269869|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0351414|
 
GeneName = Os10g0351414|

Revision as of 21:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0351414

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001189171.1 GI:297727472 GeneID:9269869

Length

5523 bp

Definition

Oryza sativa Japonica Group Os10g0351414, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10927510..10933032

Sequence Coding Region

10927510..10928536,10928699..10928911,10929524..10929841,10929965..10930068,10930228..10930584
,10930930..10931619,10933003..10933032

Expression

GEO Profiles:Os10g0351414

Genome Context

<gbrowseImage1> name=NC_008403:10927510..10933032 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10927510..10933032 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggtcacctcggcagtaggaaaatgcaacacctccaacgcctaatatactctactaatgctaaggtaatctttatttcagaaacaaaaagctctaaagtcactgcttctgatctgatccatcattttcatgtagctaatagtcatgtggttcctgttgatcaagcttctggtggtctgtggctgatgtgggatgaagacatggatcttactatagttcagtctagtattaattatatcttagcttatggagtctataagaactctggtcctattttcaatcttctttgtatttatggtgatcctagtcacagggccactagtgccatgtggagtgaaatctcctcttttgttgtacatagtagtcacaaacctaccttttgtatgggagaccttaatgagatcatgcatgctaatgaaaagtatggtttggcccctcctaatcagaatcgtattaatatttttaagcatcatgtcaataatctggggcttatggatatgggttataatggtccagcttacacttggtccaataagcaacagggtaaggatctggttttggaaaggttggacagatgtcttgcaaatgtggaatggtgttttaattatccaaataccactgtttatcacttgcccatgttgtatagtgatcatgctcccatcattgccattctcaatccgaagaacaggaggcctaaaagatctttcatgtttgaaaattggtggctgcttgaaccagattttaatcagcatgctcattcagcctggctgcagtctgtaaactgtcattttcagagaagaacaaccttgttagcaagatccttaacctcttggagcaaaaagaagaaacctcttcagcagcaattggatcagttggaagaagatctgttgaaaattcagagttcccccgacagagaacatttgtactttgaggagaaaaggattgtgcaacaacatgatattaccatgcagaagctggccgattatcacaaacagagaagtaagaagcattgggtccagaaagatgatgccactccttctatggatcaaaatgacaatgatgtaatttttcctccccctgaaatcccttctgaaaatgacatcctagaaattctaaagcaaatgcgaagagatgcctccccagggccagatggtctcaatgttgcattttatagagctgcctggaattggataaaagacgatgttactgccatggtaggctccttctatgaaacagatgatctaatcattgtggggcaggcccaacaagaggaagtcaggaaaacctctgaaataatcaattccttttgtctcagatcaggccagactccaaattggggcaaatcttccatcctgttcagcaaaagtactcctgaagaggtaagacaaaatattcttacaatctttcctgtttctcttatgaactccagcacaaagcatctagggcatcctcttctggtgagtgcaaaagacagaaatgctgcctacagtttcattgtcgacaagtttaaaagcaagcttactacttacaaagctaattctctttctcatgcaggaattcaagcagatggtggcaaaaaaggaatggctcttaggtcttggaaagacatttgcaaacctgtttctgagggaggcttgggcataagagatttgatggctgtaagggatgtcttggaggaagcttcagtgtggcaactttctaaaggtgatatttctatttggagccaaccctggtgctctatttggaaaaacattcatgatcatcttaatcttgataatcttccttttcacatgcctgataaggtttctgatctttgggatgagaataagaattgggatgctcagaaaataactcaaatttttgatagtgcagctcaacattcaattatgcaggttcagattatgcagggagaggaggaagataggctttgctggaagtacacaccctcaggagtttgttcagccaagagtgcttacaagacaatttacaatgaaatgtaccccaatcaaaatcagatttggaaagcaaggaatgatatcaacttcaaaacaaagatttgggagccacaacaagtgtgcaatgctgcgcaggcaatggcaaagacatatgaaagtgttcatcaaatggaagaagacagttgccaagacttcaatcgggctgaagagaataatataagaaattctattgttaaaattcctacaggaacaagagtttatgtggatgcctcttggaaggaagagaaaataggagtagggatcttcatccacaaccctagcaatcacaatgctattgtcatcaaagctcaaagtctcaatgcaggaactcctttgctagcagaagctgaaggattatttttagctatgcaaattgctcgtcatcttcagctgcaagaccctatttttctctcagataacagtgagatagtgaatgttgtgcagaacgaggactacatacaaaaccccggacattggtctctgagaccaattctttcaagaattaaaaattttctgcaggatcaacaagttcgaatcatttggatctctagagagctcaacaaagttgcagatggccttgcaaagtcagcaagacaagctcagactaacagctgcttagcttttgattgctctaatatttctcacatttgttccagagatgtttgtcctactaaaagagctctttccttcactcctaatggagcagttaatgagcagctaccgctgaagctgaatttatag</cdnaseq>

Protein Sequence

<aaseq>MGGHLGSRKMQHLQRLIYSTNAKVIFISETKSSKVTASDLIHHF HVANSHVVPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGD PSHRATSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHV NNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSD HAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAWLQSVNCHFQRRTTLLARSL TSWSKKKKPLQQQLDQLEEDLLKIQSSPDREHLYFEEKRIVQQHDITMQKLADYHKQR SKKHWVQKDDATPSMDQNDNDVIFPPPEIPSENDILEILKQMRRDASPGPDGLNVAFY RAAWNWIKDDVTAMVGSFYETDDLIIVGQAQQEEVRKTSEIINSFCLRSGQTPNWGKS SILFSKSTPEEVRQNILTIFPVSLMNSSTKHLGHPLLVSAKDRNAAYSFIVDKFKSKL TTYKANSLSHAGIQADGGKKGMALRSWKDICKPVSEGGLGIRDLMAVRDVLEEASVWQ LSKGDISIWSQPWCSIWKNIHDHLNLDNLPFHMPDKVSDLWDENKNWDAQKITQIFDS AAQHSIMQVQIMQGEEEDRLCWKYTPSGVCSAKSAYKTIYNEMYPNQNQIWKARNDIN FKTKIWEPQQVCNAAQAMAKTYESVHQMEEDSCQDFNRAEENNIRNSIVKIPTGTRVY VDASWKEEKIGVGIFIHNPSNHNAIVIKAQSLNAGTPLLAEAEGLFLAMQIARHLQLQ DPIFLSDNSEIVNVVQNEDYIQNPGHWSLRPILSRIKNFLQDQQVRIIWISRELNKVA DGLAKSARQAQTNSCLAFDCSNISHICSRDVCPTKRALSFTPNGAVNEQLPLKLNL</aaseq>

Gene Sequence

<dnaseqindica>1..1027#1190..1402#2015..2332#2456..2559#2719..3075#3421..4110#5494..5523#atggggggtcacctcggcagtaggaaaatgcaacacctccaacgcctaatatactctactaatgctaaggtaatctttatttcagaaacaaaaagctctaaagtcactgcttctgatctgatccatcattttcatgtagctaatagtcatgtggttcctgttgatcaagcttctggtggtctgtggctgatgtgggatgaagacatggatcttactatagttcagtctagtattaattatatcttagcttatggagtctataagaactctggtcctattttcaatcttctttgtatttatggtgatcctagtcacagggccactagtgccatgtggagtgaaatctcctcttttgttgtacatagtagtcacaaacctaccttttgtatgggagaccttaatgagatcatgcatgctaatgaaaagtatggtttggcccctcctaatcagaatcgtattaatatttttaagcatcatgtcaataatctggggcttatggatatgggttataatggtccagcttacacttggtccaataagcaacagggtaaggatctggttttggaaaggttggacagatgtcttgcaaatgtggaatggtgttttaattatccaaataccactgtttatcacttgcccatgttgtatagtgatcatgctcccatcattgccattctcaatccgaagaacaggaggcctaaaagatctttcatgtttgaaaattggtggctgcttgaaccagattttaatcagcatgctcattcagcctggctgcagtctgtaaactgtcattttcagagaagaacaaccttgttagcaagatccttaacctcttggagcaaaaagaagaaacctcttcagcagcaattggatcagttggaagaagatctgttgaaaattcagagttcccccgacagagaacatttgtactttgaggagaaaaggattgtgcaacaacatgatattaccatgcagaagctggccgattatcacaaacagagaagtaagaagcattgggtccagaaaggtgacagaaacacttctttctttcaaaaagcaacccagaagagaaggagaaagaacagaatctctagtgttatccataataattgaataatcaatgatcctgatgagatagcaactgtgttcacttcttactttgaaaatctctttcaaagatccaatacagatgatgccactccttctatggatcaaaatgacaatgatgtaatttttcctccccctgaaatcccttctgaaaatgacatcctagaaattctaaagcaaatgcgaagagatgcctccccagggccagatggtctcaatgttgcattttatagagctgcctggaattggataaaagacgatgttactgccatggtaggctccttctatgaaacaggtaagcttcaatcaggtatgaatgctactaatattgttcttgttcctaaaaattctaatcctaagtcccctgctgattttagacccattagcctttgtaatgtttcttataaaatcattgctaagtccttggctaattacattcagaataaacttcctaaccttatttgtgacactcagcaggcttttgtcaaggggagacgcatctctaataatattgtgcttgctcaggaaattgctcactctattaatctcacctcttttaatcaaaaagcttttcttttaaaaatagacttgtctaaagcttttgacaggattgaatggagattcatagcggacgctatttgtcgtaaagggtttcatgctaatttcgttcgtcttgttctttcctgcatcaactccgctaatttttctgttgttataaatggtcaatcgtacgggtacttttcagctcatcgaggtattcgtcaaggttgtcctttatcgccttatctttttgtccttgcgattaatgaactttctgaccagcttgcagatgcaattcaaaggaaccacatttcagtaataaagttaggacaaaatggtccttccattcattctctgatgtttgcagatgatctaatcattgtggggcaggcccaacaagaggaagtcaggaaaacctctgaaataatcaattccttttgtctcagatcaggccagactccaaattggggcaaatcttccatcctgttcagcaaaagtactcctgaagaggtaagacaaaatattcttacaatctttcctgtttctcttatgaactccagcacaaagcatctagggcatcctcttctggtgagtgcaaaagacagaaatgctgcctacagtttcattgtcgacaagtttaaaagcaagcttactacttacaaagctaattctctttctcatgcaggtaggcttgccctcattaaatctgtctttgcttccattcctatttattacatgtccatcatgcttttctcaaaaaaattgattgctaaactaactgctattataaggaaattttggtggacaggaattcaagcagatggtggcaaaaaaggaatggctcttaggtcttggaaagacatttgcaaacctgtttctgagggaggcttgggcataagagatttgatggctgtaaataaaagtatccttgtccaatctgcctggagaattcttactaatccaaatgatcttctatcctctgtcctaaaatcaaaatattttccaaacacttccttttggaaggctagaacagatatgccaaaatctgctttctggtcttctattcttcaggtaagggatgtcttggaggaagcttcagtgtggcaactttctaaaggtgatatttctatttggagccaaccctggtgctctatttggaaaaacattcatgatcatcttaatcttgataatcttccttttcacatgcctgataaggtttctgatctttgggatgagaataagaattgggatgctcagaaaataactcaaatttttgatagtgcagctcaacattcaattatgcaggttcagattatgcagggagaggaggaagataggctttgctggaagtacacaccctcaggagtttgttcagccaagagtgcttacaagacaatttacaatgaaatgtaccccaatcaaaatcaggtcagtaatttaacaaaaaatcttttgaaattaatctggaaacacaggtacatgcctcccagagtcaaaacttttggatggaggctgctgagtaatgctctcccaactgctcaaagaatgcaccacaggatcaaaaccgttagtcccaattgtcagacctgtggtcaaagggaggatgacttgcatctcttctttctctataatttcagtcgtttatgttggttcatctctgactttaatctcaaagctgataatctttcttctctaggctctgttcaagatattattgcctatctttcagctaatggcatcaatatatacaatcttttaattatgctttggcagatttggaaagcaaggaatgatatcaacttcaaaacaaagatttgggagccacaacaagtgtgcaatgctgcgcaggcaatggcaaagacatatgaaagtgttcatcaaatggaagaagacagttgccaagacttcaatcgggctgaagagaataatataagaaattctattgttaaaattcctacaggaacaagagtttatgtggatgcctcttggaaggaagagaaaataggagtagggatcttcatccacaaccctagcaatcacaatgctattgtcatcaaagctcaaagtctcaatgcaggaactcctttgctagcagaagctgaaggattatttttagctatgcaaattgctcgtcatcttcagctgcaagaccctatttttctctcagataacagtgagatagtgaatgttgtgcagaacgaggactacatacaaaaccccggacattggtctctgagaccaattctttcaagaattaaaaattttctgcaggatcaacaagttcgaatcatttggatctctagagagctcaacaaagttgcagatggccttgcaaagtcagcaagacaagctcagactaacagctgcttagcttttgattgctctaatatttctcacatttgttccagagatgtttgtcctactaaaagagctctttccttcactcctaatggagcagttaatgtaactcatgctttgtgtttctaaaacgctttcttttaataaagtgcatgagctctcaaaaaaaaaaaacctcgatcttgattgggtcacgtggcacaacgcatacagtcccgaattcttggcatgataagcgtttcatgcatgtattcacaccccttccgcagctgttcgatgccgtatcaggggtcaaaatggtacgaaaattttccggattccagacctattttcgaaaacagaatctgtcggtcggaaatttttcggaattttttagaaacggaaatgaattcggaaatattttctcggaaacggaatcgaaaatgataagggcagttttcgacggaactcagaatcagttggaaattttctcggaatttctgaaaattttgtgactgcgataccctggattctttttttaagcactgaacagtgaataccatggtttaaaatatgtgttatgcaaatataaagttacataagaatatttttttcctgcattagaatttatcaatagcattactctcttaaatatatataatttattccatactgtgttttgtgatgaactgttaagacttaacaattggacttatatcattgtgttttatgatgaattgttgatcgttgggacttgagaattggatttgttagtttgaggggtttttgtattccgataaattttcgttaccgtattcgcgccggttcgttttcgctccgttttcggtttccgacggaactcggaatcggtcggaaattttctcggaatttctgaaaattttgtgactgcgataccctggattctttttttaagcactgaacagtgaataccatggtttaaaatatgtgttatgcaaatataaagttacataagaatatttttttcctgcattagaatttatcaatagcattactctcttaaacatatataatttattccatagactgtgttttgtgatgaactattaggacttaacaattggacttatatcattgtgttttatggtgaattgttgatcgttgggatttgagaattggatttgttagtttgaggggtttttgtattccgataaattttcgttaccgtattcacgccggttcgttttcgctccgttttcggtttcgataatatttgattccgtttttttatccgtggtttccgatttaaaaaaaagaaaatggaaatgataaaggtggttttcgtccgcctccataccgttttcacccatatgccgtatacatggtgaaaaaaatccagtggacctaaatgtaaattacaagttctaagaggttttttttgttataaaatgcaacgttccatgacatgcagacgcggaagaaagccatttttctttagtgactaacaactctgaatgtgttttttgacaggagcagctaccgctgaagctgaatttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0351414, RefSeq:Os10g0351414