Difference between revisions of "Os10g0388600"
(Created page with "{{JaponicaGene|
GeneName = Os10g0388600|
Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein|
Version = NM_001071031.2 GI:297610417 GeneID:4348515|
Length = 8642...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0388600| | GeneName = Os10g0388600| | ||
Revision as of 21:07, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0388600 |
|---|---|
| Description |
Peptidase C48, SUMO/Sentrin/Ubl1 family protein |
| Version |
NM_001071031.2 GI:297610417 GeneID:4348515 |
| Length |
8642 bp |
| Definition |
Oryza sativa Japonica Group Os10g0388600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:13201049..13209690 |
| Sequence Coding Region |
13201049..13201080,13201165..13201306,13201523..13201715,13201885..13201981,13202065..13202189 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:13201049..13209690 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:13201049..13209690 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagaatgccgtagtcgtgcaaccatggagaattgttcggttccacgatatacaaatggatcacatacactggaaatggtggattgtccgtgcgagggtcatcaagaaaggacatctgcaagagaattattacggcgatctacaaattcgactaatactaattgatgaattgggcactaagatggaggcaattgtttaccgtcgtcaagctgagcatttcaaccagcttttaagatgtggatctgtttatgatttctataacgtcgggtttgatccgacagaaatgatcgtgcatctaagatttaagataagatctcagttctgcatgattctcaataatgtaacaactacccgcacgcctcatgatgtcattggattagttgtgcatgtcggggacattgagttcaggagtttgtatttgcgtcagacgccgacaaggataatcgcgctggttaatcctaggttgcagataattttcgttcgtgtatgggaccaacaacttacccgcaacttgactaggtggcgctcagcacggacacatttcgattgttttgtggctacgctgacgagggtggacagaagagcagatgaactatcaactacttatgagtctgacataatttttaatcctgattcagcatcagcaaatgaattcaatgttttgcgccaggcattagcagtatcaccttctaatgttcaagagcaggaaaggatatttcacatgtttgttattcttcttttatttgtcattttgtgcaaaaatttttatatcaaattttcgtcagtagagttcgatgagattaagatggaacacgtcttccgaacatgctggaagcaaaacaaatttggtgctcaatatattcggtttatcctaaaggacacaacggatacaaggatggaagcactagcgtatgaccagcaagcagatcgttttaatggaaccatacagagtggcttagtctataattttactaatgtggggttccaaccgaccgatgtgcctacctatgccaacctaaccatgcaagctaagttttgtatgattctgacaccaaagacagccctacgcaagcctcgttttgtagacttcagtgctatttttaccgacgcgataagtgatgatatgttcatagatgttgttggtgtgcttatatacgtgggagaaatacatcatcaccaactttatggacaaagcttacctactagggatattgccttggttaatcgtcgtgtggtggcaagcacttgcatcatagtattactgcatgtctgctacatgtctcaagaaattagatattctaaccgatatccttgcttaatctcatgtggtactcaggtcaatcaagacgccattcatgctgatatgattacaaccccaccctcgaagaaagcaaaaaattcggaatccgaggagcatggagtatccaaagtcagcatgccaaatattgatgtaccatcaaatttgatacgatctatgtttggccagacctacaagtatctccctcaagattatgaattaacaaatgaggatgtaatggccatatttttaattgaagattcggctgaaaattgtacactggtggacatgggtcatttttataacaagaaacgtcacttaacgtgccttctctctggagataaatttttgaacgatgatgtcatcagtgcgtacatacactgtttgagtgagcaagcaaataacgataagaaagtgaaatatgaaaacccgtttctttctgacatgctgaaagcggctggggtcaatggagtaaatgaagatgaagataactttattacaaagatagtgaagaattacctacaccatgaactgatttttattccaataaatatgaaagataatcattggtatttagcggttgtcaacatagaaaaaaaacagatacaagtacttgattccatgtgtatgacattcaatcgtgctgacctcgcaaatacgctacaaagactacaatatcatcttaatattattggacggcaacaggacttgcctagccacaaatggggtgacctcaatgttatcaagtggccaataatagaacaactaaaagaaagaattcaggaagacagttcttcatgtggactattcatgctcaaacttatggagaattggacaggagaatcactttctcgttctattacacaggaggatattacactttttaggtccaaactagccagtgtattattacgttggaaaacaaataaggcggtcatgacgaccggggaacaaatcgaagataccaaagatagtgatgacgatgttgttatattagtatctaagatgagtaaacaagagttgataagcggccttctgcactacatccaacagattaattgtgctgaagccatggagaaaatatgggtacaaagttcaaggccgcactatattagcttgagtctcaaacagcttcaaacaatactaaagaaggatgagccattggaaagtgattgcttcaacatggctattcgtaagttcatgtatgaaaaaatcgagatgattcataaaactaaacaagcaatatcgaatcattgcttggacttgcaattttggagtgctactggctttggtaaagtcccggtccaccatgacaacataaatcttgcagagaccgtcggtagttggtcggaaattcattacaaactttcacagtgcaaagcgattcttataccagtacgccatgctcgaagttttatcgtgcttgtagtggaccaagaaagtcaaacgctctatgtgttagacccaaatccacttatgccagaatataaaaataacccaaatatgagatacaccagaaaactgataactatttgtgatcacttcaacaaagctatgagaaaggcatgccctggctctaggtggaatgaagacatcaacttgtggaggcaagtaattgtcaataatccggtttacagcaggtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MENAVVVQPWRIVRFHDIQMDHIHWKWWIVRARVIKKGHLQENY YGDLQIRLILIDELGTKMEAIVYRRQAEHFNQLLRCGSVYDFYNVGFDPTEMIVHLRF KIRSQFCMILNNVTTTRTPHDVIGLVVHVGDIEFRSLYLRQTPTRIIALVNPRLQIIF VRVWDQQLTRNLTRWRSARTHFDCFVATLTRVDRRADELSTTYESDIIFNPDSASANE FNVLRQALAVSPSNVQEQERIFHMFVILLLFVILCKNFYIKFSSVEFDEIKMEHVFRT CWKQNKFGAQYIRFILKDTTDTRMEALAYDQQADRFNGTIQSGLVYNFTNVGFQPTDV PTYANLTMQAKFCMILTPKTALRKPRFVDFSAIFTDAISDDMFIDVVGVLIYVGEIHH HQLYGQSLPTRDIALVNRRVVASTCIIVLLHVCYMSQEIRYSNRYPCLISCGTQVNQD AIHADMITTPPSKKAKNSESEEHGVSKVSMPNIDVPSNLIRSMFGQTYKYLPQDYELT NEDVMAIFLIEDSAENCTLVDMGHFYNKKRHLTCLLSGDKFLNDDVISAYIHCLSEQA NNDKKVKYENPFLSDMLKAAGVNGVNEDEDNFITKIVKNYLHHELIFIPINMKDNHWY LAVVNIEKKQIQVLDSMCMTFNRADLANTLQRLQYHLNIIGRQQDLPSHKWGDLNVIK WPIIEQLKERIQEDSSSCGLFMLKLMENWTGESLSRSITQEDITLFRSKLASVLLRWK TNKAVMTTGEQIEDTKDSDDDVVILVSKMSKQELISGLLHYIQQINCAEAMEKIWVQS SRPHYISLSLKQLQTILKKDEPLESDCFNMAIRKFMYEKIEMIHKTKQAISNHCLDLQ FWSATGFGKVPVHHDNINLAETVGSWSEIHYKLSQCKAILIPVRHARSFIVLVVDQES QTLYVLDPNPLMPEYKNNPNMRYTRKLITICDHFNKAMRKACPGSRWNEDINLWRQVI VNNPVYSR</aaseq> |
| Gene Sequence |
<dnaseqindica>1..32#117..258#475..667#837..933#1017..1141#1229..1347#2838..2911#2972..3026#3063..3113#3224..3470#3553..3649#3783..3857#5899..6101#6370..6518#6608..6781#6889..7014#7106..7236#7356..7431#7511..7640#7728..7806#7880..8078#8204..8311#8382..8642#atggagaatgccgtagtcgtgcaaccatggaggtcactctttcttcattctattatttcttctgttgatggattgtgcaatgctatcatatcgtgtatattatcttccccatgcagaattgttcggttccacgatatacaaatggatcacatacactggaaatggtggattgtccgtgcgagggtcatcaagaaaggacatctgcaagagaattattacggcgatctacaaattcgactaatactaattgatgaattggtaagtcaaaatgatttttcaatcttctttttcagaattttagatctaatatgtagtttatttccactgtgactcactgtatgtagcaagcctctcagtgcacctcagccaatcaaatcacgccgaagctaaaatctttatatttattgattgattgattttaacgacaataatttttttagtgtcttatagtcttacatctcataacatgtgtagggcactaagatggaggcaattgtttaccgtcgtcaagctgagcatttcaaccagcttttaagatgtggatctgtttatgatttctataacgtcgggtttgatccgacagaaatgatcgtgcatctaagatttaagataagatctcagttctgcatgattctcaataatgtaacaactacccgcacgcctcatggtcctgtccacatgctacgttgtccatggcgttttccagaatatgatgatattttttggcaaggcacaattctttagtagatatattgtttgattcggtactgacaaaaataccaatctttgtttagttgctagcaaatgaaaaactaatgtgtctatgagttgtgcagatgtcattggattagttgtgcatgtcggggacattgagttcaggagtttgtatttgcgtcagacgccgacaaggataatcgcgctggttaatcctaggtacgacatgctccatttttttacatgtattaattaattgagatcacacaacactcatgttgcatataatttttgtaaatcaggttgcagataattttcgttcgtgtatgggaccaacaacttacccgcaacttgactaggtggcgctcagcacggacacatttcgattgttttgtggctacgctgacgagggtggacagaagagcaggtaaggaagcccccctctatttctctaacatatttgccaccgtgataaatcacatattttaaactaactgacattttccttttgtagatgaactatcaactacttatgagtctgacataatttttaatcctgattcagcatcagcaaatgaattcaatgttttgcgccaggcattagcagtatcaccttctaatgttcaagagcaggttgaagagtctatcggtagaagaaaccttcataattatcaacgccaaaactagaagatttaaatgaaggcaactatagttgcatttatttcgcatacatataatgatttttcgcttccaagtttttatagtgtcatcagctttgttgcttactcagaataagcatcacaattttataatctcaatatgatacaaaagttgtatgccactcatataaaatgatgtccatgaatctctatgaaaagcattttttacgtgcgatcaagatgatttttccgagcggaggatttgaccgtatgtacctgagtgtctggaaaactatatattttcacgtgcgggcggcccaaccacattgtataatcgattaacccgtgcggccaaatcataccgtccgcatggaaacaaattaaaacgcaaaaatcactgcctgcccgccggccagcacgcatccggccaccgcaactcgtcgtcgccgtcgtcgcaccgcatcacgcatccggccgacgccgccatgaccagccgcggccgccgcacacacccgaccgccgccacactgcataatcgattaccccgtgcggccaaatcatacagcacgctcagaaaaaaaaattaaaacacgaaaatcgctgcccgccttccgccccgtacgcaaccggcgaccgcaactcgtcgtcgtcgtcgtcgcacagcagcacgcctccggccgccgccgccgtgaccagccgcggcagccacacgcacccggccgccgccacaactcgtcgccgtcgtcgcgccgccgcacgcactcggccgtcgtcacgtcatccgaaaaattgttttatatctaaatcgttcgctcgttgcttgcttctggtacttcaaaagctaagtgctttgatttttttgcatgctactatgcactcgtcctattaataactgagaaaggatgtatacaagctatgggcctgatcggcccatatcacggtgcaatgaaacatgacgagctgcttccgttttgtcgccgcgagattgccgccgcgcgtgtagcaccgaccttccgtttatcccgtcggttcccacccaggcatcccatccactgcattccaatcgccgccgcatccaagcgcctttcatcggcggtcggctgccgcgaccgcgacgacgctgccgccgcaagtgcaacacttcaaatcgatcttcaactgcaactgaattttgaagaggtgcctttctactgcactatatgtgaaataagaggtgagagcaacaccaccacgttcttgtggtatactctcgtttgttgcaaattgaatttccatgttatctgtttgtctaatattacaattttttttggcaacttcaatgattcacttccaatagagtgtcaattacaacaacatgatgtcggcaaattatcgcacacacatctccaaccgggttcatgcccccgcgtcagaacagtcgcctgatgcatctcaacctgtaacaatcaaaaaaccatttaacaggaaaggatatttcacatgtttgttattcttcttttatttgtcattttgtgcaaaaatttttatatcaaattttcgtaagttgagggtacgtacctccttttgtatgtttaccgttactttatgcatggctgcaggtcagtagagttcgatgagattaagatggaacacgtcttccgaacatgctggaaggtgagtgcgaaggtggtgttcaaatctcccatgcagcaaaacaaatttggtgctcaatatattcggtttatcctaaaggacacaacggtatgtcacaccaatcacctctctcctcctaattgctagatataatggagcgttgtgcacaaaagttatggaaattatgcctttattctatatgtacaatttaaacgtaggatacaaggatggaagcactagcgtatgaccagcaagcagatcgttttaatggaaccatacagagtggcttagtctataattttactaatgtggggttccaaccgaccgatgtgcctacctatgccaacctaaccatgcaagctaagttttgtatgattctgacaccaaagacagccctacgcaagcctcgttttgtagacttcagtgctatttttaccgacgcgataagtgatgatatgttcataggtaaagcaacaaccttcaataactattttcatccctttttttgaactctatagttatgttcattacataaatattcgttcagatgttgttggtgtgcttatatacgtgggagaaatacatcatcaccaactttatggacaaagcttacctactagggatattgccttggttaatcgtcggtgagttcattttcagtttttcctttacataacatgttctcatattgtgagtggtccctaatccacttttagtactacagatataaggtaatctttcttcgaatttggggtgaatatgcatctcgacatacagtgtggtggcaagcacttgcatcatagtattactgcatgtctgctacatgtctcaagaaattagatattctaaccggtaagtaacaaatcatcctaataggaattactatttgaccattttgtttgcgaggtaatagaactgaacactgtcagactgacttgcttatcgtgcagagacattaactactacggtggactccgaattgaccaactctacagattcactcagtgcacctgagttgggcgtgattcgtcgtttattcgttagttctcgtgaggatgctcaacggttcactcaagcagtcgtttccttgagagcgaaatttattactattgcttcccttttagaccgattggatcctcaaggaatcatcagacgagatgtgcctttgatacaacaagaggatactatcgcccgttttaaaaaagcttaagagattgcttttagattcatgattttcgttatatgtttaacatttgtagggatgctctggtctattaacgttgttttttgggtcgtagaaacataaattaaaatgtcctattatttcgattatgatgatttgttatgtccggatttggtccggtatgttcgaaccagataaaaaaacacatggttttccgatgatgcatatgttcccccttgcaatgcacgtgttattttcatacacaaattaaaccagaactataatattatgaaaaaatattttacgtcctaattaattgcatccggtttgttcagaccgtttcgaccaaaaaatttaatcgtgatacattccctttattttttttaacgagatatacttacgtgcacggtccaacaattttgttctctcaatttttttccttctaattttaatcgtacccatgatatcggatttattcagtttcccgaagattgatggacaaaataatcgaaggaaggaagaagcgtgaaactgcctcgactcctgcgtacccaggacacgtgataaggcccatcaactcatccagattaaggcctatataatattagtcagtcaagaatcactttcgacttgattaggcccatcaactcataaagattaagccctatataagataagctggtgccctgtttccttgctaagtgttgccgtgatattcagtttgatctgctcgtcgtatcgccgccgcacaactcgccgaataccaaggctggtaaacaagcgccgccgccgtcgcaaaatccaccgaaaccagactacgcgaccaccacacgatggatgcatcgccgtcaaatccgccctcgtcgactccgccacatccgcagactcctccgccactactgttgttgacgacgccgccgccgccgccagtcccgtcgtcgccggctccgccgccgtcgccgccgctgccgccgtcgccgccgccgccattgccgtcgccggctcctcctccgccgcccttgccgtcatcttcggcgccaagcaatgtcagcacagatattgatcctgtaagttaagcacccagcttaattagtccatgaagactatcgatacatatatatatatatatatatatatatgtgtgtgtgtgtgttctattgcgatttgggttacttatagcaggcagtacattagctagctaatgttaatgcatggtactgtagattaatgctatacactgtacgttacttgattattaattaaagcacctagctcgccatccactattatattaaaaaattattacttacaaatatgtcaattgcattaatatatactcctacactagcttgtgcgtagtgctcagggttgcttctttacttatatgaggaactcatctctcgcactcgcaaaaccgagggactcattaacgtatgattaattaaatagttttcaattagaacaaatagatttttatggttttataaaataactctaacaacataactcaacataaaatcaacctggccctcagcttattttacaaataatatataatactctgagtggtatggttcaccaagaaaaaaagattaatagctatgatcgagcaaaataaagcattgcaccaacttatgcaacaataatattgacatccctgccgacgtgttttttgtttagtgttatatataatttccatatgcaatatagatatccttgcttaatctcatgtggtactcaggtcaatcaagacgccattcatgctgatatgattacaaccccaccctcgaagaaagcaaaaaattcggaatccgaggagcatggagtatccaaagtcagcatgccaaatattgatgtaccatcaaatttgatacgatctatgtttggccagacctacaagtatctccctcaaggtacattattgttttcacatactcccttcattccacaatgtacggcaaaattactttttcaagttgtttcataatataaggcatatatgcatgcatgtcattaactaacacctcttctccactaaaatattattattttaactctccactaagacctctaattttattgggtgcatgcataattatctcttggtctttggtttaagagtggttgtgctttatatataaaactttgtgatatcagaattcatttttttttgttttacagattatgaattaacaaatgaggatgtaatggccatatttttaattgaagattcggctgaaaattgtacactggtggacatgggtcatttttataacaagaaacgtcacttaacgtgccttctctctggagataaatttttgaacgatgatgtaagtaaaactgcctatgatgaagcaacgttacaatttaattgccaacatattctttagtaattgcagatttttaattgaatcaacaggtcatcagtgcgtacatacactgtttgagtgagcaagcaaataacgataagaaagtgaaatatgaaaacccgtttctttctgacatgctgaaagcggctggggtcaatggagtaaatgaagatgaagataactttattacaaagatagtgaagaattacctacaccatgaactggtattgtttggctctctatatttgatagtatttaagtttattatttatttatatatatagatataatataatataatatatgtcctaactccatatgtcttgtttagatttttattccaataaatatgaaagataatcattggtatttagcggttgtcaacatagaaaaaaaacagatacaagtacttgattccatgtgtatgacattcaatcgtgctgacctcgcaaatacggttagtgtatatgacatgtgaactctcttttttttttaagattgtaattcatttatgtatattgctgactgtaaatatgataattgagcagctacaaagactacaatatcatcttaatattattggacggcaacaggacttgcctagccacaaatggggtgacctcaatgttatcaagtggccaataatagaacaactaaaagaaagaattcaggaagacaggtatactacaaataaatttttcatgtaatataatattaatataagatgaatgatatatttcaaatggtgtacggttgtttagtttttaatagttgtacttatactttaaaacaatgcagttcttcatgtggactattcatgctcaaacttatggagaattggacaggagaatcactttctcgttctattacacaggtgtgtttcttaataaaaaaatagttgatcaaatatcttatctatttaaaattaaataaatttactttttaatgcgcaggaggatattacactttttaggtccaaactagccagtgtattattacgttggaaaacaaataaggcggtcatgacgaccggggaacaaatcgaagataccaaagatagtgatgacgatgttgttatattaggtagtcatcaacggaaattcggctctacaagggacatcaataaaactaaagaagtaaacaaaaaatatagttcactactctctgtagtatctaagatgagtaaacaagagttgataagcggccttctgcactacatccaacagattaattgtgctgaagccatggagtaagccactgcaatgcattgtatacacaatcgtaattcatatatgcattaacttattttctttgattgacaggaaaatatgggtacaaagttcaaggccgcactatattagcttgagtctcaaacagcttcaaacaatactaaagaaggatgagccattggaaagtgattgcttcaacatggctattcgtaagttcatgtatgaaaaaatcgagatgattcataaaactaaacaagcaatatcgaatcattgcttggacttgcaattttgggtaagtttttaaattctaatgctcatgtcattctctattgctcatgttattacctataatcgcaatatcgaatatattgatttatctattgcttatgtaattgaaccattttttaaatcatgtagagtgctactggctttggtaaagtcccggtccaccatgacaacataaatcttgcagagaccgtcggtagttggtcggaaattcattacaaactttcacagtgcaaagcggtaagatcgctaagataccatcctatatggccgtgttttatatattatcttgacggatgatcttttgtagattcttataccagtacgccatgctcgaagttttatcgtgcttgtagtggaccaagaaagtcaaacgctctatgtgttagacccaaatccacttatgccagaatataaaaataacccaaatatgagatacaccagaaaactgataactatttgtgatcacttcaacaaagctatgagaaaggcatgccctggctctaggtggaatgaagacatcaacttgtggaggcaagtaattgtcaataatccggtttacagcaggtaa</dnaseqindica> |
| External Link(s) |
