Difference between revisions of "Os10g0412100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0412100| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001071122.1 GI:115481987 GeneID:4348610|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0412100|
 
GeneName = Os10g0412100|

Revision as of 21:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0412100

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001071122.1 GI:115481987 GeneID:4348610

Length

5316 bp

Definition

Oryza sativa Japonica Group Os10g0412100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14714464..14719779

Sequence Coding Region

14715136..14715281,14715417..14715567,14715649..14715763,14715852..14715943,14716024..14716077
,14716556..14716642,14716730..14716816,14716898..14716981,14717066..14717152
,14717500..14718256,14719198..14719355

Expression

GEO Profiles:Os10g0412100

Genome Context

<gbrowseImage1> name=NC_008403:14714464..14719779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14714464..14719779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgagcgtggtgcgggtgcacctgccctcggagatcccgatcgtgggctgcgagatcacgccctacgtgctgctgcggctgcccaccggcgtcgtctccaccgacgatgtcccggaggccgcccctgcggatggctacttcatgcggtacagatggtaccgtatacaaagtgatcgaaaagtcgcaatctgcagtgtacatccaatggaacaagcaacaattcagtgccttggttgcgtcaagtcaaaaatacctgttgctaagagctaccattgttctgctaagtgcttctctgatgcatggcagcaccatagggtcttgcatgagcgagctagtagtgcattaaacgaaaatggagctgaagaagaggagctatttggcagatttggtagcactggttctggggttcttagtactactggttctggatcgatgtcaaatcttggacagagtcctggtttgaataatggccccgtgcctttatatccttcaggcactgataagaactcgggtgaaacttggtatgaagtggggcgcacacggacatatacaccaactgctgatgatattggacatgttctaagatttgaatgcgtgtctgtggatgctgaaaaaaaggtacctgttggacctccaacttcaattatgacatcccgtgtgattccagcaccaactccaactccacgtcgccttatccaagtgaatggagatgttttgagtcacttagatttggacagccaaacatctttcgggacattctcagtgctgtcctacaatattcttgctgatgcatatgctacaagtgacgcgtatagctactgcccaacatgggcactttcttggacatacagaagacagaacttgatgcgtgagattattggttatcatgctgatatcatctgtcttcaggaggtgcaactgaaccacttcgaagattttttttcacccgagcttgataaacatggatatcaggcactttacaagaaaaggacaacagaggtatatactggagctcctcatgccatcgatggctgtgccacctttttccgtagagacaaattttcacacgttaaaaaatatgaggttgagttcaataaggctgcacaatcattgacagacgcaattattccctctacccaaagaagagttgctttgagtcgattgattaaggataatgttgcactgattgcggttttagaagctaaattcggcaaccatggaactgacaatcctggcaaaaggcagcttctttgtgtggcaaatacacacgtaaatgtccatcaagacctcaaagatgtgaagctgtgggaggttcaaactctcctaaaagggttggaaaaaatagctgttagtgcggacattccaatgttggtctgtggggatttcaattcagtccctgggagttctccacatggacttcttgctatgggcaaagttgatcaattgcatccagatctggccatagatccccttggaattttacgccctgcgagcaagttaacccatcagcttcctctggtgagtgcatattcttcatttgcaagaatggtcggtgtcggctatgatttggagcaccagcggaggaggatggaccctgcaacaaatgaaccacttttcacaaactgcacacgagatttcactggaacggttgattacatattttacacagcggattcattgtcagtggagtcgttgttggaacttttggatgaggaaagtttaagaaaagacacggcccttccttctcctgaatggtcttcggatcatatagcactcttggcagaattccggtgcaagcctagaatcagacggtga</cdnaseq>

Protein Sequence

<aaseq>MLSVVRVHLPSEIPIVGCEITPYVLLRLPTGVVSTDDVPEAAPA DGYFMRYRWYRIQSDRKVAICSVHPMEQATIQCLGCVKSKIPVAKSYHCSAKCFSDAW QHHRVLHERASSALNENGAEEEELFGRFGSTGSGVLSTTGSGSMSNLGQSPGLNNGPV PLYPSGTDKNSGETWYEVGRTRTYTPTADDIGHVLRFECVSVDAEKKVPVGPPTSIMT SRVIPAPTPTPRRLIQVNGDVLSHLDLDSQTSFGTFSVLSYNILADAYATSDAYSYCP TWALSWTYRRQNLMREIIGYHADIICLQEVQLNHFEDFFSPELDKHGYQALYKKRTTE VYTGAPHAIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAIIPSTQRRVALSRLIKD NVALIAVLEAKFGNHGTDNPGKRQLLCVANTHVNVHQDLKDVKLWEVQTLLKGLEKIA VSADIPMLVCGDFNSVPGSSPHGLLAMGKVDQLHPDLAIDPLGILRPASKLTHQLPLV SAYSSFARMVGVGYDLEHQRRRMDPATNEPLFTNCTRDFTGTVDYIFYTADSLSVESL LELLDEESLRKDTALPSPEWSSDHIALLAEFRCKPRIRR</aaseq>

Gene Sequence

<dnaseqindica>4499..4644#4213..4363#4017..4131#3837..3928#3703..3756#3138..3224#2964..3050#2799..2882#2628..2714#1524..2280#425..582#gggaagacacgggacacggaagaggggagagagcgagagcgagatagagttcgagttctacgcccaaaaccctagcaagctcccccgccccgccccgcgtctccagtaccttccagaagcttccaaccccccaccccccaccaccaggtgagtggatctcccatttccccccctctccccgcgagctcgccccgggcgggggatcctagtcttgacccgtgtgcgtgtgtgattcattccgccgcaggaagagcgtgcttggatcgcgcgggggaggcaacgctggcggcgcgcaggtgatggcggatccgcctggcggtgggggatctagcgcttgcgtctgtgagcggagggaggcggaggcggtggtggtggtggtggtgccggagctggggagaagaggaggagagcagcggaggggaggatgctgagcgtggtgcgggtgcacctgccctcggagatcccgatcgtgggctgcgagatcacgccctacgtgctgctgcggctgcccaccggcgtcgtctccaccgacgatgtcccggaggccgcccctgcggatggctacttcatgcggtacagatggtgagtaactcctcgagactctgaaaatcttagttgaatcagatgagagctgtggattgtgtagttctgcttgcttgattgctaaatgttgcgcactaaacttattgctgaatgttgcgcactaaactttgaccaagcaaggggaattttcgtagctttggtcaggcagatttctatgtgcttatatagttgttaaagtttggggaatgctcatttattggctcaactccttcataaatgaagcatagttggatgtattcagattaaatggtctaataagcttatcgtttgttttgtctgaaaaatggagccttagagattgtaaaatttagatgcggaaacatctatactgctgagttggaaacatagtttgatgcatatgaattgaaccgtttggtacatgtttttcaaattgcattatgacatatcaggaagcacagtttagctaatattaattgctatcatgagtgattcattgaaaagtgccattaattgggtggtttctgatgataaaacaagtgttattagaactatgggacagtagcaagtatttttgatatggggtatgttatgatggcttgagaaatgttgtcgtgcaagaatgttagtagtatccatcttcgatggaataggtatataacacactttatggtgttctgttggatcatcctatagttcctattgaaaggccctgttctatgagttctatgagtttctcctcattgtctgttgagttgttgtagaattggatccattacgctgataataaacatgattttatatgctcaagatgtgcaaatagcactgatgtacacgatgcttatagctagtttctgtgagctgataatgcaaaacactagctctttaggtggcctttgttggtttcaacacttccagttccaatgggatttggttataatgttttgatttactccttgaaggtaccgtatacaaagtgatcgaaaagtcgcaatctgcagtgtacatccaatggaacaagcaacaattcagtgccttggttgcgtcaagtcaaaaatacctgttgctaagagctaccattgttctgctaagtgcttctctgatgcatggcagcaccatagggtcttgcatgagcgagctagtagtgcattaaacgaaaatggagctgaagaagaggagctatttggcagatttggtagcactggttctggggttcttagtactactggttctggatcgatgtcaaatcttggacagagtcctggtttgaataatggccccgtgcctttatatccttcaggcactgataagaactcgggtgaaacttggtatgaagtggggcgcacacggacatatacaccaactgctgatgatattggacatgttctaagatttgaatgcgtgtctgtggatgctgaaaaaaaggtacctgttggacctccaacttcaattatgacatcccgtgtgattccagcaccaactccaactccacgtcgccttatccaagtgaatggagatgttttgagtcacttagatttggacagccaaacatctttcgggacattctcagtgctgtcctacaatattcttgctgatgcatatgctacaagtgacgcgtatagctactgcccaacatgggcactttcttggacatacagaagacagaacttgatgcgtgagattattggttatcatgctgatatcatctgtcttcaggaggtatcatatatatcaactaaatttccctattaacttttttggtgatttgttctattatttcccccacacagttacagttaattgaatgctatgctagattatggtggttgggctgctgtttcaactgatgcaaattttccacacttacctagagttttctgaagcttcttgtcatattatgctctaataatacttgattggtctcatcattttgaactgaattcatataataaaaatgctaagaaacaaaactgccctaaaatagtattgtaggttgacttctttgtgaaattgaatccataagtaatctaccttcataaaattaagttgaatcctactgttttcaggtgcaactgaaccacttcgaagattttttttcacccgagcttgataaacatggatatcaggcactttacaagaaaaggacaacagaggtatatttgactgcatctggttctattataatacgcatttatacgcttcaatttcttatttgattctgcttcatgtttttaaaggtatatactggagctcctcatgccatcgatggctgtgccacctttttccgtagagacaaattttcacacgttaaaaaatatgaggtacggccactgctgatttgagagtggtatgctaatctgcaggctgcagctatctaatatttcttgtacctggttgttcaggttgagttcaataaggctgcacaatcattgacagacgcaattattccctctacccaaagaagagttgctttgagtcgattgattaaggtatgataaattaatagaagaggatattgcatgctaatttattccattgctgacttttcattattgctggttctgttttctttgaaggataatgttgcactgattgcggttttagaagctaaattcggcaaccatggaactgacaatcctggcaaaaggcagcttctttgtgtggtatgtcaacaactctgcttcagagaagcacttagatgctaattgttagcagcattctgaagggatcagttaaatgttttctttggacaacggatttggactcattcaggcctcgtttggatgtgtcgaaatccgaaagcccagtccatatatgcatgtatgggatttcagttcacttttcatggcttacatgtggatggactgggattgaggcccatccaaaagatatgccttgggagaactatgcaaggtttacatgaaattaagatgcatccacatctctgaatcttgatgcatggctttagtattacatgtttgtcagggtgacctatctttaattgactttttttttggtgggggaatgggggttgggggttttatacaattcttcataccgataaacagtcttgacttgatgcattatggcgtcatgggggtcgcaggtctcatcactttttcaactgttctcactctgcaggcaaatacacacgtaaatgtccatcaagacctcaaagatgtgaagctgtgggaggtctgtgccatcacattttctttatgctagttttgtgtaacatcttagaatttcagattgacactgtatggcttttgcaggttcaaactctcctaaaagggttggaaaaaatagctgttagtgcggacattccaatgttggtctgtggggatttcaattcagtccctgggaggtgtgtataaatatgctatcactgtagtatttatttggtaaaattattttgaaaccatggacttctaagtactcaattatgctttcagttctccacatggacttcttgctatgggcaaagttgatcaattgcatccagatctggccatagatccccttggaattttacgccctgcgagcaagttaacccatcagcttcctctggtacagtaaaatatattggtctggtgatcccttttatcccatgatcaaagaactcttaccaagggtcttgcttgtttgtaggtgagtgcatattcttcatttgcaagaatggtcggtgtcggctatgatttggagcaccagcggaggaggatggaccctgcaacaaatgaaccacttttcacaaactgcacacgagatttcactggaacggttgattacatattttacacaggtcagttcctggaccagtttatatctgtatgctttgatattataattttgtagcttcagtaaacatcttttaaggattacacagctagtgtcatgaaacatttaatgatggcccacacttgctttcgtatttcagcggattcattgtcagtggagtcgttgttggaacttttggatgaggaaagtttaagaaaagacacggcccttccttctcctgaatggtcttcggatcatatagcactcttggcagaattccggtgcaagcctagaatcagacggtgacaccttaggtatgtcataagggcataaccacattttaattatactgtaggactgcggtgctctgattttgctagtgcaaacagcacatggctcaagtaagatttggtgcctgcttcgctgtcaaagtgccacatgtgcaaatacctttaaattccagtggtttacatttgtaacaattaaagctaagaaaattgttttttgcacaataactcatctgaaagtacgcagaaatcgtcattctagtcatgtttgttgttgtccatcacctcatttcatctcggtgaaaagtaacataacatgtagtggatcttgtctattatgcgcaacacacgacaccctttcttcatttgatgttccaagctgactgactttcttcaggtcgcgaatagatggttaacttcagcacccatgcggtggaacattcttccatggtgtgtgggacttgaggagggatggacgaaagcggatcctcggggaaggaccaccagcaccagcaggcttagggtagtggcctcatgaaagggaggcttgtaatgttgattacctcttacatttccaactcatgatgtttttaagcggccccattgtaatatcactttctatagaaggaaagatctcctgagagagagacatttttatgacagattcagatgccatcatggctaggccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0412100, RefSeq:Os10g0412100