Difference between revisions of "Os10g0427000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0427000| Description = TRAF-like domain containing protein| Version = NM_001189232.1 GI:297727594 GeneID:9267736| Length = 1188 bp| Defini...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0427000|
 
GeneName = Os10g0427000|

Revision as of 21:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0427000

Description

TRAF-like domain containing protein

Version

NM_001189232.1 GI:297727594 GeneID:9267736

Length

1188 bp

Definition

Oryza sativa Japonica Group Os10g0427000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15640003..15641190

Sequence Coding Region

15640003..15641190

Expression

GEO Profiles:Os10g0427000

Genome Context

<gbrowseImage1> name=NC_008403:15640003..15641190 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15640003..15641190 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcaatgcgccatgtctcacacgcgctctaccaccgccggcgccgccggcggtaagccgccgatcgcgccgccgccgacgtcctccgcctccgccattgtcgccgacacggccagcgggtaccacctcttcaagatcaacgactactcgcgtaccagggacatcttccccaccggcagtgccctcaagtcccgcgcgttcaccattggcggccaccaatggcgcatccattactaccccaacggcaacacggaggagtgcggcgagtacatctccctgtttcttcatctcgacgagattgtcaccgacaagaacgtgtacgcgcagcacgggttccgtttattcgacgagtttgccggtgataatgatgacgatgatgaactgcagccttcctccatcgctgacctcgggcaggtcagtacctttggtggcaacaacattgggttgggacgactgaggtttatcaaaagggaagagttggagaaatcgaagtatctgaagaacgactccttcaccgtcagatgcgatgtcgtcgtcaccaagcggatccgctcggaggagacgccattggtggtgaggacctctccaaagccaaaggtggcgaggctcgtcaccgtgccgccgtccgatctgcaccggcatcttcaggacctcctctgcgccgagaagggcgccgacgtggtgttcgaggccggtggcgagacttttaccgctcaccggtgcgtgctcgcggcccggtcaccggtcttcagcgcggagctgtttggatcaatgaaggagagcgacaccacggtggtcatccgcatcgacgacatggaggcacaagtgtttagggccttgctcttcttcgtgtacaccgactcgttgccggagacgaagaaggaggacgagtatgccatgtgccagcatctactcgtcgcggcggacaggtacaacatggagaggctcaagctaatgtgcgaggagaggctatgcagctacatcggtgtgggcacggtgacgactatactggagttggccgagcaacacaattgtgatggcctaaagaaagcatgctttgattttctcagctctcaggagaatctgaaagctgtcacggccggtgagggattggagcatttgagcaggaactgcccttcccttgtgaatgagttgattggcacgctcggcaacttaattcagtga</cdnaseq>

Protein Sequence

<aaseq>MGQCAMSHTRSTTAGAAGGKPPIAPPPTSSASAIVADTASGYHL FKINDYSRTRDIFPTGSALKSRAFTIGGHQWRIHYYPNGNTEECGEYISLFLHLDEIV TDKNVYAQHGFRLFDEFAGDNDDDDELQPSSIADLGQVSTFGGNNIGLGRLRFIKREE LEKSKYLKNDSFTVRCDVVVTKRIRSEETPLVVRTSPKPKVARLVTVPPSDLHRHLQD LLCAEKGADVVFEAGGETFTAHRCVLAARSPVFSAELFGSMKESDTTVVIRIDDMEAQ VFRALLFFVYTDSLPETKKEDEYAMCQHLLVAADRYNMERLKLMCEERLCSYIGVGTV TTILELAEQHNCDGLKKACFDFLSSQENLKAVTAGEGLEHLSRNCPSLVNELIGTLGN LIQ</aaseq>

Gene Sequence

<dnaseqindica>1..1188#atgggtcaatgcgccatgtctcacacgcgctctaccaccgccggcgccgccggcggtaagccgccgatcgcgccgccgccgacgtcctccgcctccgccattgtcgccgacacggccagcgggtaccacctcttcaagatcaacgactactcgcgtaccagggacatcttccccaccggcagtgccctcaagtcccgcgcgttcaccattggcggccaccaatggcgcatccattactaccccaacggcaacacggaggagtgcggcgagtacatctccctgtttcttcatctcgacgagattgtcaccgacaagaacgtgtacgcgcagcacgggttccgtttattcgacgagtttgccggtgataatgatgacgatgatgaactgcagccttcctccatcgctgacctcgggcaggtcagtacctttggtggcaacaacattgggttgggacgactgaggtttatcaaaagggaagagttggagaaatcgaagtatctgaagaacgactccttcaccgtcagatgcgatgtcgtcgtcaccaagcggatccgctcggaggagacgccattggtggtgaggacctctccaaagccaaaggtggcgaggctcgtcaccgtgccgccgtccgatctgcaccggcatcttcaggacctcctctgcgccgagaagggcgccgacgtggtgttcgaggccggtggcgagacttttaccgctcaccggtgcgtgctcgcggcccggtcaccggtcttcagcgcggagctgtttggatcaatgaaggagagcgacaccacggtggtcatccgcatcgacgacatggaggcacaagtgtttagggccttgctcttcttcgtgtacaccgactcgttgccggagacgaagaaggaggacgagtatgccatgtgccagcatctactcgtcgcggcggacaggtacaacatggagaggctcaagctaatgtgcgaggagaggctatgcagctacatcggtgtgggcacggtgacgactatactggagttggccgagcaacacaattgtgatggcctaaagaaagcatgctttgattttctcagctctcaggagaatctgaaagctgtcacggccggtgagggattggagcatttgagcaggaactgcccttcccttgtgaatgagttgattggcacgctcggcaacttaattcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0427000, RefSeq:Os10g0427000