Difference between revisions of "Os10g0478100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0478100| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001071394.1 GI:115482531 GeneID:4348904| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0478100|
 
GeneName = Os10g0478100|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0478100

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001071394.1 GI:115482531 GeneID:4348904

Length

4931 bp

Definition

Oryza sativa Japonica Group Os10g0478100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18363081..18368011

Sequence Coding Region

18363514..18363576,18364203..18364274,18364392..18364487,18365532..18365657,18365960..18366017
,18366411..18366466,18367066..18367143,18367230..18367334,18367462..18367570
,18367749..18367882

Expression

GEO Profiles:Os10g0478100

Genome Context

<gbrowseImage1> name=NC_008403:18363081..18368011 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18363081..18368011 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacggcggcgcccgcatccgctacggcggctgcgagcctcttcctccgccggagtctctcctcctcctcccctcgccacgtcttcctgcctcattgggttgcccccattgtcgtcgcgcgccccgctaggttatctgcggtgccggcgaagcgcggtggaggtggtgttgttgcggctgcatcggcggcggcggggagcgcgcagtttggcgccggggacagtgagaatccatacgagattttggggatcagtccacttgatgggttcgaccaggtgaagatggcctataagcggaggcgaaaggatgccgagagcaacaaagatgccgagcacctgttcaagttagagagggcatacgatatggtcatgatggagcagcttcagaaccggaagaatggggtggcatatggatcaatccaggtgtcaaaggacattaaatatgctgataatcaaccagtggttccttgggggcctagatactcaagatccactgggaaggacctgcgcattaatatggcaatatcagcaacatttatcatgtatatatctaccatgggccatgcagactggaagcccatgcagtttttgtgttttgcctatttctatcgaatacttgacaaactgaaggctaccgagtcagctagcactcctatatacaatgagtatggtgaggttgaaggtcgtggcatacacatggcaaaacgagtactccgtagtttgggtttggtacttggatcaatacttgctgtatccctgggctacactgggctagccaatttttctcagtttcttgggcagtatattccatctgttgtttataacttccaggaattgattgtgactacagcttcatctgttttgctttgcatattggcgtcgtactatcgatag</cdnaseq>

Protein Sequence

<aaseq>MSTAAPASATAAASLFLRRSLSSSSPRHVFLPHWVAPIVVARPA RLSAVPAKRGGGGVVAAASAAAGSAQFGAGDSENPYEILGISPLDGFDQVKMAYKRRR KDAESNKDAEHLFKLERAYDMVMMEQLQNRKNGVAYGSIQVSKDIKYADNQPVVPWGP RYSRSTGKDLRINMAISATFIMYISTMGHADWKPMQFLCFAYFYRILDKLKATESAST PIYNEYGEVEGRGIHMAKRVLRSLGLVLGSILAVSLGYTGLANFSQFLGQYIPSVVYN FQELIVTTASSVLLCILASYYR</aaseq>

Gene Sequence

<dnaseqindica>4436..4498#3738..3809#3525..3620#2355..2480#1995..2052#1546..1601#869..946#678..782#442..550#130..263#agatagcgcacgccacctcccctcccctcccctcccatggcaacgccaccaccgccaccgccttcgcctcgtcgcctccgccgctagccgttacccccccaccaccggcgccccctcaccttctccccaatgtcgacggcggcgcccgcatccgctacggcggctgcgagcctcttcctccgccggagtctctcctcctcctcccctcgccacgtcttcctgcctcattgggttgcccccattgtcgtcgcgcgccccgctaggtaaattacgcccgcgttgttgggataattggttccgtgcctcgtgaaatcgtagcccaacgttggtagagttcgtcggtttcgcacactttattagttgtcggtgggggtttgcttttttttttttttacaagcagttgttaattcacggtaaatcacgatgaggaaaaaaaaacaggttatctgcggtgccggcgaagcgcggtggaggtggtgttgttgcggctgcatcggcggcggcggggagcgcgcagtttggcgccggggacagtgagaatccatacgaggtagaatgattgggttattgggagtggctatgttcatgtttaggatcagccttcgttggtgatcaggtgattcagtgattggatgtggctcctggtcttgttgtgatggttggtccctgtttgttagattttggggatcagtccacttgatgggttcgaccaggtgaagatggcctataagcggaggcgaaaggatgccgagagcaacaaagatgccgagcacctgttcaaggtggttttgggtcatgggggttcagaatttggttactgttgtgttgttaatgtattgatgagtgatggagttttgtcgaatttcagttagagagggcatacgatatggtcatgatggagcagcttcagaaccggaagaatggggtggcatatggatcaatccaggttactctctactattatttccttgtcacattgatgatgcatggtctacagcaacaaagtttgcacttgcgcgttactgccctttttttgtatgtgctccaccgtttacggtagcactgttcaatcccatgcagtcggcaatttggcatatgtatccaattagagttagatatgaggattcatattcacaaaattgatttgtaattgcaaaactgatttgttctgtatatggtaacagactgttaccattcgtttggtactccttggttaaattccttcatgctaaaataaacacatactgatatttactgttgagcgacgtagtttgagatgcagagatatctaaccaagcaacgcattgcctgctattaagcttgatggttactttagcatggtgaatttgacggagatcttagatgacttatcttgcatcgactcttctagtctccttactggagtgaacttcatgagacctctgtcggttgccatgtttaagaggatccttccaacatatggctaataatgaaatgagtctcatgataattctctattctgatgttttctttcactgattattcagttctctttctgaacattaggtgtcaaaggacattaaatatgctgataatcaaccagtggttccttgggggcctaggtaccttacagttcacattttgtaaccaatctcttcatgtgcttcttcaatatatactgtgtacattttgttttccaatgcatctatacactatgaatcttaggagacttaacagacttaattcttgactgcaatcctgcatccatgaattgggcatccttgttacttaatgcagttctctagcaaaacttgatgatccaatgcccatgcccttattgtttttaaattttaacttttctctagcataactgttgattattcacatgttagttccaaatattaaaactctgggccactggaaatatcatcacacattaacacctatccacttctttgttagctttagtgctatgctattgccatttcatgatcatcatcatgatcatcttgcagatactcaagatccactgggaaggacctgcgcattaatatggcaatatcagcaacatttgtaagaaaattattttctgtatcatcccaagtaccacattgaaatattaataattactgtttttaatcaaacacaatgttttatgaatcccagtggattgttcctctgtactcaactttgttatatgcattggtgttaaacttgaaattacacaatagaaaataatttgaatttcagcattatttcacataggatttttttaatcatcagcttgccaaacttcctatcttgggcaagtcattttgtgtatggagaaaaggtactttattaatggacatttttttatccttttttttttgcagatcatgtatatatctaccatgggccatgcagactggaagcccatgcagtttttgtgttttgcctatttctatcgaatacttgacaaactgaaggctaccgagtcagctagcactcctatatacaatgtgaggcggtttactaaataattttatttgctgttcccttttcattttctatggaatccctgcacttacaggaatgacatatcaaataatcaaattggttcagtttgctttactctattgtagttcagatatgataagagcaaaaggtacactagggaaatggagctattagatgggatggaattcttacttttcatgagttgggaatgcatatatttgatatatgtggctccttttttagttacaaagttacataagtgcatgcttgtcttgtattaaggatcttagattacttggtcactagtttttagctttgcagttcagcttgacagaatcacagaagaagtctagctaatgttccggatagataatgtggcatccccttgattggggaaagcattgcatgagggtacccttcttttgagtttgctacaatttcttttagtcatgaagatacacattttactctaaagatggatgtgtatactgttgggctgtaaatagaatagtgtgtgtgtgtttgtgtgctggcccattagctagaggcccatctactcatctatatgtaaataacgatagcaatacagaagtggtgaagcttccagagaaaaattcacaaaactacatatacaacaagtttaaccaaatgatgcctgtatcaactttttttttaaaaaaaatgtcgattgactctatcagcccctgctcacaaaattaaagaacaggggtgtacatgcctgctcttgggtggctgcgtcctgcttagagcttttgtttaccaggtagtcagtatgcgtttgttttctaaagtctttaaaaggatttgctctttgtttcttgcatgctaattaatacaaagcggcagccctcctgctgttaggttcaaaaataatatattaaatgatgcatcgttcggaacaagtagatattgtccaaagtttggaatattaaaccatttatccttgtatctgtgctggtgcgctacatttattatttgtagtcttaattgttaaatataatattgaaataaaatgtttgtggcaggagtatggtgaggttgaaggtcgtggcatacacatggcaaaacgagtactccgtagtttgggtttggtacttggatcaatacttgctgtatccctggttagtgggttgttcggatacagtgctatctagatgctaaactattggtttatctgccagttttctctactgtttctcagtattcgtatcctcaccctaatgttttatccttttcagggctacactgggctagccaatttttctcagtttcttgggcagtatattccatctgttgtttataacttccaggtatgttatgcttgagcatatctgatgttgtttgggattattttattggatcagagtgccacatttttatattcattcttgttaccaagatcacatttacagccccattgtttcgcttattcggggaataagcgaaacggcatatttgcaaacgaaaaataatgtgtgaatagaacttttatatacgtgttcttagcgatctaaaagcaaaggctgaaaaataaacttcgttaaaaaaaccccaaaatcaaatccaaatttaagtttgaaaattcaaattttgactgataagcataagcataagcgaaaagatgaggccattaagctgataagttccacacttaaattttctcccatttgctaagttacacacttaaaaaatttcacttctgtcataaagtagaaactggaaagttgttagtgtttttaaaaagacagacaagcctcctgaaaataatattttttcgctggaggctaaaagttaaaaactctaataagaatactggagtaagcaataagtgcaatctctttttctggtggagaacatgtaatggaagaatgctagtgaatattgttgctgttgttttcaggtgaagtaaaactaattggtggctatcttatgccaggaattgattgtgactacagcttcatctgttttgctttgcatattggcgtcgtactatcgatagcaacttgtgtaattgtgttggatcaccccttggcattgcaatcttgataaacctgtcttcatgagggccatggtcgataacttgagcctattctgctatggaatatgagagcccatcaactatataagtgcactgttcttgcatgttttacatcgttcttacatctggaaaattttgcagctactgataagatgttctatccaatgttttgaaactgaaatttagcatgcaagagacagacagctaacaaagcaatgtgtcacatgaaacctgacgatgctgaaaatctagttctagtgagttgttccagcaaaaagttaactgcaattttcctagaagtttccttgagtttgcaatctgcttgcaagttccttgtatatttactgaacaattactctgtgttggtgagttatgaattacaacgtccttatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0478100, RefSeq:Os10g0478100