Difference between revisions of "Os10g0486900"

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(Created page with "{{JaponicaGene| GeneName = Os10g0486900| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001071439.1 GI:115482621 GeneID:4348950| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0486900|
 
GeneName = Os10g0486900|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0486900

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001071439.1 GI:115482621 GeneID:4348950

Length

4649 bp

Definition

Oryza sativa Japonica Group Os10g0486900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18877922..18882570

Sequence Coding Region

18878110..18878283,18880800..18880979,18881446..18881572,18881709..18881822,18882176..18882291

Expression

GEO Profiles:Os10g0486900

Genome Context

<gbrowseImage1> name=NC_008403:18877922..18882570 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18877922..18882570 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgatcgagcaggagccggaggtcgaggagacgccggcggcggcagaggagccggctgccgaggagcaggcggcgggtggtgcggccggaggggaggcggcgagggcggatggggaagacgaggaggaggccttcgaggacgcgctgaccgacgagcagctccgggagaaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctggagaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctggaatctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagttgggcaaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttgaaagccttgctccggaggggagaagcacatgaaaagcttgaacactatgatgaagctattgctgatatgaaaaaaattattgagctggatccttcaaatgaacaagctaagagatcactgttccgactggagccactggcagctgagaaaagggaaaagatgaaggaagagatgatcggaaagctcaaagatctggggaattctgtgctcgggcgctttgggatgagcgtcgacaatttcaaagctgttaaagacccaaacacaggctcgtactccatttcgttccagcagtga</cdnaseq>

Protein Sequence

<aaseq>MVVIEQEPEVEETPAAAEEPAAEEQAAGGAAGGEAARADGEDEE EAFEDALTDEQLREKARSQANDAKAEGNKFFGAGEYERALSQYETALQIAAELESAED IRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKLEHYDEAIA DMKKIIELDPSNEQAKRSLFRLEPLAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDN FKAVKDPNTGSYSISFQQ</aaseq>

Gene Sequence

<dnaseqindica>189..362#2879..3058#3525..3651#3788..3901#4255..4370#gggaccccgagccgatcgatcgatcgaatcgaatcccccgccgccgccgcctcctcgccgtcgagctcgaccgcgccgccgcgttgcccccctctcctcctcctcccccggcgacgcgtcggtcgctgagggagcttgtcttggtgctcgccgcgttaaaccccgcgaggcggcgagcaggggctgtgatggtggtgatcgagcaggagccggaggtcgaggagacgccggcggcggcagaggagccggctgccgaggagcaggcggcgggtggtgcggccggaggggaggcggcgagggcggatggggaagacgaggaggaggccttcgaggacgcgctgaccgacgagcagctccgggaggtagtgccttggggcgtcccgtccactcgatccccctccctatctccgttctcgctgttgccccgaactgctgtacctaaatcttagggaaatctggggttccgatggtagcagcagtaacttctattagtcaccgagggttttgtggggatcgatttttttccctctatctgggggagttgagatggaagaatagattggaaaatttctgattactgccgagaattccactggtacacttgggtttagggcaggtttggttgtggatagggatgtacccccacttcttcattttagcttctttagagttaatgatgtgaacaactagactactagagtacggtgcaagggttagtaaatgggctatggtctaatgaggttgtttagtgctaattcctttcatatccttgcggagagaatttctattttcggccaatctgttactttgtgcagttattaatatgcattttcgtagctggctctcttgtttatgaggtttttacctgcgtgccattaaaaaagatgacccctgcctctgtgccactaaaaagttcgagcctccctctatgtcatcgtcgaactttatcgcgccctccacaccactccgtcgctattctgtttgggtttaaccgtttggcagctttgacatgtgggcccatgcagaaaaaatgtcgctcttgcccttctagtctctgcttgcctcaagtgcgccacagagagagagcgcgaaggcgacgcggcggcggccgacgcagttgagtgcggcggcatggcagcacggtcgtgcgcacaggatgaaaggcgagccagcacggcggtcaagccgcgcagagagagaacggcgccgtcgcagccgccgagcatcggacccacggcgccgtcgcagccgccgaaagagggcgtggaggggtacgggttggcaacggctgcacgccctcttcctcgcctccacttcaccaacattgccaccgcggctgctcccgatttgcggcgacgggcgacgatggcggcgaagctcttgctcgcggcggtcaccgtgaagctctcccgttgacctcgtgcagcggcacaggttcccggccaccgcgcgctccgcctcggccgccgtgagcctcgagaagccctccgcggcggccccaaacaacaatcaatctccctccattgcattgcggttcgaatcgaatcgaattgaagatatttcgttcttcttccctattagctcttcctcccgctcgttcagcttggattgaacatccattcagagtttgattgttgtttgtttcaatccaattaatccatccagtttcctgtcgatttcatgcgtgatgaagtactaatcgaagcaatttgtttcccacgccggctgctcccgagcccctcggtggttgtcaccgcgcagtggtggaggccgtgcaccagcgtgaggcacgagttgaccgccgcgtgcgtcacctcgtcgacctccgcgtcgtacgctgagaccaccaccacgcacgcccgcaaccacctgtaaaaataccaaaaccgagaaaccatcaagctcgctcgccgaagccgatcgaacggaagcaaagcagccgaggaggaaggggagatggtttgtgttgccttgccttcgccacagccgagcttggcaccggtgaaccgggtgcgggagcggaggaactcgaggagggactccctggggtcgcccccgttgcggcgaagctcgaagcgctcgccgttggctgcggcggcgagccggcgacggcgaatccatggcggtggaggaggaatccgattctcatctagccccatttcacactctcccctatctctctaagggcaaataagtcatttggctgcgcggtcacacaccgttaggaccaaaaacgaacggagtggtgtgaagggcgcgataaagttcgacgatggcatagagggaggctcgaactttttagtggcacaggggcaggggttatcttttttaatggcacacaggtaaaaacctccttgtttctacgatggcgtgattctgtgatcttaaggtcttattaggtgattattttgttctctcattctctagtttggaacagttgcaatcagggcggtttaactgcaattgttcatatgcatatgagataacacaaagttggtgcttaagaagtcgtgtggtagtattatgtgctaggtagaactagtgcttgatgcttcacttgctgtcccagtttccatagcagttatcctttttgcaacacaagtatcacctggttctgacccttgacaaatacaaagctaggtactagcaccaaaccgacaactaaaatttgttgttatgatagattagcagtctagttctagctgctagccgctacatgctaaacagtaattagattcaccagtttatagtttctaaatggacgttattgtttggaccttgttgacatggttgggattagatataacttgtatgttggtgaagagatttataagcttattgcattctgataaatgattgtgcttcctacttcctgtagaaagctagaagccaagcaaatgatgcaaaggcagaagggaacaagttttttggtgctggagaatatgagagggcattgtcgcaatatgagacagctttgcaaattgctgctgagctggaatctgccgaagacatacgctccgcatgtcattcaaatcgtgctgtatgcttcttgaagttggtaagcctttctattggtctttaaatatggaggaaatagatgatttccatttggttgtcatcagtaataattttccttatgtgaattcgcaacaggatcatggtagatgtgcttatttcattaatatgttacccctagtcccctaccatcagtatatttacccctttaactatagatttctcctaaaaaccagttatccttcttaatgtacagtggctacatgcctatttctttattccttgtataaacttgcttccaaagtataatagagagttatgcctggataaaatgctaggctaggccttttttttttctggtgtttggtagttgaaatcaaccattatttctttagttttactttaatggcattttattttctttatcagcagattatttttctccagttgttttgtttgagtaatatcatattataataaaaccacaatgctaacaccctgtaatttagggcaaatatgatgaaacaatcaaagaatgcaccaaagcacttgagctgaatccttcatacttgaaagccttgctccggaggggagaagcacatgaaaagcttgaacactatgatgaagctattgctggttagatattattctcataacgtgctttagatttagagactatttcacactattattattactattacctgtgagtatttagctccgatgccatattgtttaagtcctcttgtgctgggtgtaatcctcatctcagatatgaaaaaaattattgagctggatccttcaaatgaacaagctaagagatcactgttccgactggagccactggcagctgagaaaagggaaaagatgaaggaagagatgatcggtaatagtttcttctcaaatttcagagtactgtgtgcatttactcctatgatttcggtgtagtctgtgttgctgtactcaggcaacctttatgtaaatccatctttcattttctttttctaattgtgctagttagttccagttcatccaaactagttttacctggttgattatatggagtgcactggtatagtatgtgcaagcaacataatgaagttctaaattgtttatataacgtttggtcagaaaagatgtgttatgatatcctgagccatgcaaagcttctgtataactcttgacctagtgaaaaaccttttctgtatctcaatttgtgaatatctttctctgttgcaggaaagctcaaagatctggggaattctgtgctcgggcgctttgggatgagcgtcgacaatttcaaagctgttaaagacccaaacacaggctcgtactccatttcgttccagcagtgacgacatggggtagtaacgagttgtttaaatgaatatggacaagtacacatgcagtcactgtaaatcctggaatgctaatgtcatttggttcaaaaactttggcccttttgtatcaataggtttgttaccatcgcccgcagttaaatctgaagatggtgcatggacgtttgcagttatgttctgagagaggtggtttagatgagtgaacttgtattataggcgtttgccacgctgtgattctcttcattttatcatagcaattcttgtttgcttgaacat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0486900, RefSeq:Os10g0486900