Difference between revisions of "Os10g0518100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0518100| Description = RabGAP/TBC domain containing protein| Version = NM_001071607.1 GI:115482957 GeneID:4349126| Length = 3414 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0518100|
 
GeneName = Os10g0518100|

Revision as of 21:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0518100

Description

RabGAP/TBC domain containing protein

Version

NM_001071607.1 GI:115482957 GeneID:4349126

Length

3414 bp

Definition

Oryza sativa Japonica Group Os10g0518100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20480254..20483667

Sequence Coding Region

20480373..20480527,20480633..20480768,20481023..20481072,20481694..20481747,20481981..20483346

Expression

GEO Profiles:Os10g0518100

Genome Context

<gbrowseImage1> name=NC_008403:20480254..20483667 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20480254..20483667 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggcgtggggcctcgtcgagcgcgccgccgcgggcctcctcggccccctcggcggagcccatggcggcggccgatggaacaccgccgtcgccgtcggtgtcacggccgccgccggcctcgtgctcgtcgtgatcgttgtctcctcccgcagaggtgggctcaaatcgccgtggtggcggcggcggaggaaggccgcgcttaagccccatgaatgggtcagcttgttcacgccggaggggaagcttaaggacggcggagtgaagcttctgaagaaagttcgaagcggagggattgagccaagtatcagagcacaggtctggccattccttctgggagtttacagtcttggtagttcagaatctgaaagagacgcggttaaggcacagaacaggaaaggttatctgttattgaggaaccattgcctgcgaaaatctgtctacatcaatgaagagaacaaacaatcaaatgaagccgctggagccaaacatgtggagtgtgttagttctgaaaaaggcgaagacactgtcaatccagctggatctgaagaagtacctgataaatctagtgtagaagagcatcttgttggcgatgacactgttggtcccgttgtatctgaagaagtggctgaaaaatcttttgtcgaagatcatcttgttagtgaggaggaaaatccatctgccaatccaggagaagaagtgcaggatgacacatctaaaacaagccctgagaagctgacagatggaaatcattcttcatctagttcatctagtgaggaagaaagtgaatcaagtggcctgactcatgtagaaacatctcatatggttgtcgcctcagttcagcaatctttaactgaggatgaacaagaaagtatcccgagatattccaacacaggaggaaacatggaaaatgatagcgagttatctaaggctgctcgtcctgtgaaatctgtacgcacaattgaggattttgagacttggcaacgaattatccgcttggatgcagttcgtgctaatgatgaatgggtttcttactccccatctcaagctgtagtttccagggagaaggcaattgaatctgctaaagctgtttgtctgaaagattacgaacatttggaaccacataggatccgtcatgcagcacgccttgttccaattcttgaggcttatgccatctatgacccagaaattggatattgccagggcatgagcgaccttcttgcacctctacttgccgtactggaagatgacaatgaagccttctggtgctttgctggttttatgaggaaagcccgtcataatttcaggcttgatgaagtgggcattcgcaggcaactgaacatggtagccaggataatcaaatacaaggacttccatctttacagacatttggagatgctccaagctgaggactgcttctttgtttacagaatggtggtggtcatgttccgaagggagctgacctttgagcagaccctctgtctatgggaggttatgtgggccgatcaggcagcaaaccgtgctggaattgcaaaatcatcgttggggaaactgcggttaggagcccctccaactgatgacttgctactatatgcaattgcggccagcgtgctgcagaagaggaaactgataatagagagctatagcagcatggatgagatcataagggagtgtaacagcatggctgggcagctggacatttggaagctcctggacgatgcgcacgatctagtaacgacccttcacggtaggattgagtag</cdnaseq>

Protein Sequence

<aaseq>MWAWGLVERAAAGLLGPLGGAHGGGRWNTAVAVGVTAAAGLVLV VIVVSSRRGGLKSPWWRRRRKAALKPHEWVSLFTPEGKLKDGGVKLLKKVRSGGIEPS IRAQVWPFLLGVYSLGSSESERDAVKAQNRKGYLLLRNHCLRKSVYINEENKQSNEAA GAKHVECVSSEKGEDTVNPAGSEEVPDKSSVEEHLVGDDTVGPVVSEEVAEKSFVEDH LVSEEENPSANPGEEVQDDTSKTSPEKLTDGNHSSSSSSSEEESESSGLTHVETSHMV VASVQQSLTEDEQESIPRYSNTGGNMENDSELSKAARPVKSVRTIEDFETWQRIIRLD AVRANDEWVSYSPSQAVVSREKAIESAKAVCLKDYEHLEPHRIRHAARLVPILEAYAI YDPEIGYCQGMSDLLAPLLAVLEDDNEAFWCFAGFMRKARHNFRLDEVGIRRQLNMVA RIIKYKDFHLYRHLEMLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAANRA GIAKSSLGKLRLGAPPTDDLLLYAIAASVLQKRKLIIESYSSMDEIIRECNSMAGQLD IWKLLDDAHDLVTTLHGRIE</aaseq>

Gene Sequence

<dnaseqindica>120..274#380..515#770..819#1441..1494#1728..3093#ccggaatccatccatcgcgagagcagagggagggggatcgcggcggcggcggcagctgcggcgaagggggaagcgccggaacgggagccgtggagcgatccgtcgggcatcggcgcccgatgtgggcgtggggcctcgtcgagcgcgccgccgcgggcctcctcggccccctcggcggagcccatggcggcggccgatggaacaccgccgtcgccgtcggtgtcacggccgccgccggcctcgtgctcgtcgtgatcgttgtctcctcccgcaggttcgtcgcctcccaacccttactccccatcctctaggaggcctggtgtggtgttcccttcctggcttcctttcgctgagttgctagcgggtgctttgattgcagaggtgggctcaaatcgccgtggtggcggcggcggaggaaggccgcgcttaagccccatgaatgggtcagcttgttcacgccggaggggaagcttaaggacggcggagtgaagcttctgaagaaagttcgaagcggagtaagagagttttgctttttcgtttatactccctccatttcacaatgtaagattttctagcattgcctacatatatatagatgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatggcaatgctagaaagtcttacattgtgaaacggatgaagtattctactattatgtttccatgattcggtgtaggttaaggagttatatgattttgttctatgtgcttctgtgacaggggattgagccaagtatcagagcacaggtctggccattccttctgggagtgtaagtactctggaaaacttaatttcgagacggctatagtcaaggacttacgtgttcagatgaataattatatcggcaacatgctatgatcatcttgtacttaagcaaatgacaattgattttgcctcctggatttgaggaaagacttctaggctagcatctcaacttctgaacataggctaagtgtgcaggagcataacagaacttctgatcataccagttgtacacacatgctgagtagttactaagggtgcgttctaaagagcttatctgattgtctactccctcgtttattgtgagcatgtttcccgaaccgctaaatggtgtgttttttgcaaatattttatatatagaagtttcttataaaaaaacaaataaattcatttttcaagtttgtaatacttaatactcaattaattatgcgctaatggctcgcctccttttgtgtgccaagtacaacttataaagtgtttttttttctttcaatcagcagaatgtgagaagaatgtattgctacagtgaggaatattgtgtggttgcatattgtagcatatatatatgtgtgttagttgtgtcttgaagatagcttccatgtgatctgaatttttcattcttatgcagttacagtcttggtagttcagaatctgaaagagacgcggttaaggcacagaacaggtacattcttctgcatgcacattttgtatgtctctctgttcttcctgctttatcgcatcctcatatacctgcccaaagctgaccaatcaaaccaaatccacttgagaacctttcctgatagagttaacatgttatatctgctactctttattttgaaatttgactagtgcctcttgtgttcttttttctgggttatctgaagttgactttttaatggtggatgaattttgtaggaaaggttatctgttattgaggaaccattgcctgcgaaaatctgtctacatcaatgaagagaacaaacaatcaaatgaagccgctggagccaaacatgtggagtgtgttagttctgaaaaaggcgaagacactgtcaatccagctggatctgaagaagtacctgataaatctagtgtagaagagcatcttgttggcgatgacactgttggtcccgttgtatctgaagaagtggctgaaaaatcttttgtcgaagatcatcttgttagtgaggaggaaaatccatctgccaatccaggagaagaagtgcaggatgacacatctaaaacaagccctgagaagctgacagatggaaatcattcttcatctagttcatctagtgaggaagaaagtgaatcaagtggcctgactcatgtagaaacatctcatatggttgtcgcctcagttcagcaatctttaactgaggatgaacaagaaagtatcccgagatattccaacacaggaggaaacatggaaaatgatagcgagttatctaaggctgctcgtcctgtgaaatctgtacgcacaattgaggattttgagacttggcaacgaattatccgcttggatgcagttcgtgctaatgatgaatgggtttcttactccccatctcaagctgtagtttccagggagaaggcaattgaatctgctaaagctgtttgtctgaaagattacgaacatttggaaccacataggatccgtcatgcagcacgccttgttccaattcttgaggcttatgccatctatgacccagaaattggatattgccagggcatgagcgaccttcttgcacctctacttgccgtactggaagatgacaatgaagccttctggtgctttgctggttttatgaggaaagcccgtcataatttcaggcttgatgaagtgggcattcgcaggcaactgaacatggtagccaggataatcaaatacaaggacttccatctttacagacatttggagatgctccaagctgaggactgcttctttgtttacagaatggtggtggtcatgttccgaagggagctgacctttgagcagaccctctgtctatgggaggttatgtgggccgatcaggcagcaaaccgtgctggaattgcaaaatcatcgttggggaaactgcggttaggagcccctccaactgatgacttgctactatatgcaattgcggccagcgtgctgcagaagaggaaactgataatagagagctatagcagcatggatgagatcataagggagtgtaacagcatggctgggcagctggacatttggaagctcctggacgatgcgcacgatctagtaacgacccttcacggtaggattgagtagtgatatactgatacactctactcattttgtacacggcttgttgtattactttacacattttcatccttacgtcatatttcatctctttttcactaacactccctccatggatatgtgttagtttgggactacagacctacagtaccacaggctcagttgcatggtgtcccagtctagctgcctctcaggattaggccattatcttttcttgatcatagtggtgtaactggaccatctatgcgtgtggatttctttcttgctgtggtcgctgtcagtatcctgcaaatccatgtgatagcatcataccaatgtgcaaggggc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0518100, RefSeq:Os10g0518100