Difference between revisions of "Os10g0534100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0534100| Description = Conserved hypothetical protein| Version = NM_001071694.1 GI:115483131 GeneID:4349228| Length = 3953 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0534100|
 
GeneName = Os10g0534100|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0534100

Description

Conserved hypothetical protein

Version

NM_001071694.1 GI:115483131 GeneID:4349228

Length

3953 bp

Definition

Oryza sativa Japonica Group Os10g0534100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21234921..21238873

Sequence Coding Region

21235131..21235201,21235345..21235392,21235480..21235620,21235698..21235712,21235813..21236058
,21236199..21237038,21237708..21237768

Expression

GEO Profiles:Os10g0534100

Genome Context

<gbrowseImage1> name=NC_008403:21234921..21238873 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21234921..21238873 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctttcttattggggctaaaagaatggagagttccagctctggttcttgtcctcagggtacagtgtatcattggtttgtcttgtttgcggtttggctttgtggcagccagcatgttctttcgcagaaaacaccacttgaaccaaaagataaattccttctatctgatccgccaattggtctctttgatccaatagagatttcaccatctgttcttccacacaatgctaacccagttgagccactgtcaccgatgtatccaaactacacatcatatgatccggtcttgactggaaaatgccatgtaaatttctcagcgctttcttatatgatggataaaacagcatctgattgttccattcctttagcaccactagttgctgatgtgatatgctgcccccaagttaatagcttgatgaatattttccaagctacatatggtgctggaaacaatacactagttctgaaccaggcttcagcaaatgcttgtttctctgatgttatgagcattctggcaagcaaaggagcaaacactaacatccctgagttatgtactctaaggccatcaaatcttacggatgcttcttgccctgtgaaggatattagcacatttgagaaaatagttaatgtaagcaagcttctagacgcatgcagcgatgttgacccactgaaagagtgttgtagacctgtttgccagcctgcaatagtggaagcagcagttcacatatcctctggaggagcaaacatgtttggaagttctagcatatctggaagtgatgctgggatcaacgtcgttagtgactgcaaaggggtagttcactcctggttatctatgaagctttcatcagaagaatcaaacactgcttttagagtattatctggctgcaaggtgaacaaagtttgtccgttggagtttgatgatccttcttccgttgttaaggcatgtggcaaggcatcttcttcaacgccctcatgctgtggggcattgcactcttacattgcaactcgccagaagcaaatatttgtaacaaatttgcaagcaattaactgtgcaaccatgttcggatcaatgctacagaaagctggtgtatcaaatgatatttatgagctttgtgatattgatttaaaagatttcagcctgcaagcatttggtcagcaaggctgtctacttcgcagcttacctacagacattgtatttgacaatgctacgggcattagttttacatgtgatttgagtgacaacattgcagcgccatggccatcatcatcatctgttcaatccttgtcactttgtgctccagaaatgtcattgcctgcattgcctgtcgcgccaacatctggaagctcagtaggtatctccagaactggaattggaattttggcgcctcttctattctttgcgacggccatcaccttctga</cdnaseq>

Protein Sequence

<aaseq>MCFLIGAKRMESSSSGSCPQGTVYHWFVLFAVWLCGSQHVLSQK TPLEPKDKFLLSDPPIGLFDPIEISPSVLPHNANPVEPLSPMYPNYTSYDPVLTGKCH VNFSALSYMMDKTASDCSIPLAPLVADVICCPQVNSLMNIFQATYGAGNNTLVLNQAS ANACFSDVMSILASKGANTNIPELCTLRPSNLTDASCPVKDISTFEKIVNVSKLLDAC SDVDPLKECCRPVCQPAIVEAAVHISSGGANMFGSSSISGSDAGINVVSDCKGVVHSW LSMKLSSEESNTAFRVLSGCKVNKVCPLEFDDPSSVVKACGKASSSTPSCCGALHSYI ATRQKQIFVTNLQAINCATMFGSMLQKAGVSNDIYELCDIDLKDFSLQAFGQQGCLLR SLPTDIVFDNATGISFTCDLSDNIAAPWPSSSSVQSLSLCAPEMSLPALPVAPTSGSS VGISRTGIGILAPLLFFATAITF</aaseq>

Gene Sequence

<dnaseqindica>3673..3743#3482..3529#3254..3394#3162..3176#2816..3061#1836..2675#1106..1166#gtggcgcacacagtcgctcgctcgctcgcctgcctccccacctcaccagctcaccccacgcctcccctcccctcccctccccaaccctaatcccctccccgccggcgcgctcccctcgccgctcgccgccccccacggcagccgcagggcaagggaggggggagacactgcccctgcaggtgcacgcgccgtggcggcgcgcgcgctctctctctcgcggggaggaggcggacgcgcgcggcccccacccgccgggatcggcgcgctccagatccagcggtgacggcgggagccgaggtgaggcgggctgcttgagtggttacagtgagttgtttttggtgctgagttcaccagcaaagcgaatctagtcgcattcttttttttttttttttgggggggtgggggggggggcattttgctggaacaagggagtggaagtaggggaagtagtacatttcgttgctcgaaatgcttactatcgattaaatgttgggaaactggaggtggtagcatggtgaaaaaggcagagagtttagctgacgctgtaggtggtttcacaatgctcttggtcttggatgtaacacatgctgctcacttcgtgcagcagccaggatcctgagctcccacttactatcttagtgctatgtgagtgaggagaaacgtatacttgcctgggattccaacatctgaccagttgctaaggctaacggcccatttttagctcagttaatgtgaaccatacctgaatgcttaacgaaaatagtatatatttctgtgtttctatttatagagtagcttgcaaactcattatctcattcacgtggaaaatgtacgccgttaaggaatcgttgctggcgagttgattgggagtacgagtctctgggatatgcatgattatgtacttgactttgttcatgaagtgttactcttgcacttttctttctaatggttctatttttcttggtgcattaccattcattttacgtgtatacacaggctttttacgcctatttgtttcatgcagtgctaccgtccccaatgatcctacgagtagagctactggacttttactgggactgaggaccctgtacaaactgcctcatgcatgtgctttcttattggggctaaaagaatggagagttccagctctggttcttgtcctcagggtgagtatgtcaatctgcatattattatagccagtaaattttatccaagcttaaggggaagatactgagatatgaatatagaagtctgcttggaacttttagttcttaacgctgaaccattcatatgggtgtgtgaactaggttgcaaatgtgtcagcactcagcagtagcattaacattggggatgacatggtagagcatagatgggacaagcatgtcacattattttcttcaaaaaattggcatgttaacatagttttacagatgaagcgatatggacactatgtctacaatatatactgtcttgcacctattttgaaaatttcagcttttctgataatacccagcacaaccattctcttgtaataataagctacttatattatttgctgattaagaacctgttgtagtgcatactgaatattcctgataacttgatgaatataataatgattacggttccatgatatactagatttgctaggtagcaaactcctttcctttcatggagaaatcagtttaaaatttactgtggattttttatgggtatgcatattatgtgcaggccatatgcttactaggcaaaagtccatatttagttgaatcacactatacaatatctgtaatttcccttcaatgtgctattctaaaatgattgttgcattgcaggtacagtgtatcattggtttgtcttgtttgcggtttggctttgtggcagccagcatgttctttcgcagaaaacaccacttgaaccaaaagataaattccttctatctgatccgccaattggtctctttgatccaatagagatttcaccatctgttcttccacacaatgctaacccagttgagccactgtcaccgatgtatccaaactacacatcatatgatccggtcttgactggaaaatgccatgtaaatttctcagcgctttcttatatgatggataaaacagcatctgattgttccattcctttagcaccactagttgctgatgtgatatgctgcccccaagttaatagcttgatgaatattttccaagctacatatggtgctggaaacaatacactagttctgaaccaggcttcagcaaatgcttgtttctctgatgttatgagcattctggcaagcaaaggagcaaacactaacatccctgagttatgtactctaaggccatcaaatcttacggatgcttcttgccctgtgaaggatattagcacatttgagaaaatagttaatgtaagcaagcttctagacgcatgcagcgatgttgacccactgaaagagtgttgtagacctgtttgccagcctgcaatagtggaagcagcagttcacatatcctctggaggagcaaacatgtttggaagttctagcatatctggaagtgatgctgggatcaacgtcgttagtgactgcaaaggggtagttcactcctggttatctatgaagctttcatcagaagaatcaaacactgcttttagagtattatctggctgcaaggtgaacaaaggtatgtgatgtcatacactgtttggtttggtttcatctgttaatgggataatctgtagatatgttgtgtactgtggccaagttttcggtactttgtgctatgtgcacaatgtgatctatctgactcattgaatcatgcagtttgtccgttggagtttgatgatccttcttccgttgttaaggcatgtggcaaggcatcttcttcaacgccctcatgctgtggggcattgcactcttacattgcaactcgccagaagcaaatatttgtaacaaatttgcaagcaattaactgtgcaaccatgttcggatcaatgctacagaaagctggtgtatcaaatgatatttatgagctttgtgatattgatttaaaagatttcagcctgcaaggtatggacagaagacatgataacttgtaatcaattgtacttcacattggaatgatctaactttgtttactattcttggcattattctcccactggaacagcatttggtcagcaaggttagttcattctattaactttatttggtttccatcggtctgaagtcctgtgctaatgccaaccttcctttttgtaggctgtctacttcgcagcttacctacagacattgtatttgacaatgctacgggcattagttttacatgtgatttgagtgacaacattgcagcgccatggccatcatcatcatctgttcaatccttgtcactttgtgctccaggtaaggtgacatttcaggtttagcactagaaaaaacagtgagcttcgtacaacacaaattgacatgatacccctcctttggtttcagaaatgtcattgcctgcattgcctgtcgcgccaacatctggaagctcaggtacttaatttacctttttgttggcaatacaatatatatctcattttattctttcatgtttctattagaatcattactctctttttacatcactataactctatccttatgccaacaaactgaaaagacgcttgttatggcagtaggtatctccagaactggaattggaattttggcgcctcttctattctttgcgacggccatcaccttctgagaaatgcttcacctagtgaaccaggagcttcttacccctgttgtattttttcccctctgtgcaggcccacgtgtaaattgaattgcatttcattcttgtaaatgagcctttcccttctctgttcttttttgttcggtggatagcattgctgttatgtgttagagaggactgttgtaccatcagatatctgaacaatggaggtaaatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0534100, RefSeq:Os10g0534100