Difference between revisions of "Os10g0548600"

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(Created page with "{{JaponicaGene| GeneName = Os10g0548600| Description = Beta-expansin precursor| Version = NM_001071837.1 GI:115483269 GeneID:4349301| Length = 1780 bp| Definition = Oryza...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0548600|
 
GeneName = Os10g0548600|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0548600

Description

Beta-expansin precursor

Version

NM_001071837.1 GI:115483269 GeneID:4349301

Length

1780 bp

Definition

Oryza sativa Japonica Group Os10g0548600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21920288..21922067

Sequence Coding Region

21920354..21920540,21920824..21920933,21921312..21921824

Expression

GEO Profiles:Os10g0548600

Genome Context

<gbrowseImage1> name=NC_008403:21920288..21922067 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21920288..21922067 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcgctcaccaccaacatcgtcctcgccgtcgccgtggtggcagcgctggtcggcggcgggtcgtgcggcccgcccaaggtgccacccggcccgaacatcacgaccaactacaacgccccgtggctccccgccagggccacctggtacggccagccctacggctccggctccaccgacaatggtggcgcgtgcgggatcaagaacgtcaacctgcctccctacaacggcatgatctcctgcggcaacgtcccaatcttcaaggacggcaggggatgcggctcatgctacgaggtgaagtgtgagcagccggcggcgtgctcgaagcagccggtgacggtgttcatcacggacatgaactacgagcccatctcggcgtaccacttcgacttctccggcaaggcgttcggcgccatggcttgcccggggaaggagaccgagctccgcaaggccggcatcatcgacatgcagttcaggagggtgcgctgcaagtaccccggcggccagaaggtcaccttccacgtcgagaagggctccaaccccaactacctcgccgtgctcgtcaagttcgtcgccgacgacggtgacgtcatccagatggacctccaggaggccggattgccagcgtggaggcccatgaagctgtcgtggggcgccatctggaggatggacaccgccacgccactcaaggcacccttctccattcgcgtcaccaccgagtccggcaagagcctcatcgccaaagacgtcatcccggtcaactggatgccagacgccatctacgtatcaaacgtccagttctattga</cdnaseq>

Protein Sequence

<aaseq>MGSLTTNIVLAVAVVAALVGGGSCGPPKVPPGPNITTNYNAPWL PARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC EQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFR RVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSW GAIWRMDTATPLKAPFSIRVTTESGKSLIAKDVIPVNWMPDAIYVSNVQFY</aaseq>

Gene Sequence

<dnaseqindica>67..253#537..646#1025..1537#atccatctcaccaccaaaaaaaaaaggaaaaaaaaacaaaacacaccaagccaaataaaagcgacaatgggatcgctcaccaccaacatcgtcctcgccgtcgccgtggtggcagcgctggtcggcggcgggtcgtgcggcccgcccaaggtgccacccggcccgaacatcacgaccaactacaacgccccgtggctccccgccagggccacctggtacggccagccctacggctccggctccaccgacaatggtaatgttactatcttatcgtgtaatgttattctctccgcctcaaaatattagttccgccgacaacggtaaagttactatcttatcgtgtaatgttactatctcctcttcaaaatattagtttactggctcatcatgtagtgttactatctttgtctcaagatagtacgatagaataacgaatctgaacagtgtctaaatccatggcgatggagtaactgtgaagctcatccatgatctatggcgatcgatcgattaattggttgagttttgtttttttccaggtggcgcgtgcgggatcaagaacgtcaacctgcctccctacaacggcatgatctcctgcggcaacgtcccaatcttcaaggacggcaggggatgcggctcatgctacgaggtaacctcaccaattaattaacacaacctcatcgtctcgtactctcccaatcattgtcccgaggacatgcattcgtacatctccttcgaaacaaaggaatttcattttagaatttcataagggttaatttagaactatagtgattatataatgaaaatatatccagtaaaactcttgtgtttcaaattaaggcggcctgatcttatcaacaagtcaatgtttaatacattgctatttcacaaacatttttggcagtttatatttcacaaacattcaatgcaatatatatatggaattttgctaaattaatggacatcgatttacgttaggtacattttgatttgggcattaatttggccgagtacattttgagtacaggtgaagtgtgagcagccggcggcgtgctcgaagcagccggtgacggtgttcatcacggacatgaactacgagcccatctcggcgtaccacttcgacttctccggcaaggcgttcggcgccatggcttgcccggggaaggagaccgagctccgcaaggccggcatcatcgacatgcagttcaggagggtgcgctgcaagtaccccggcggccagaaggtcaccttccacgtcgagaagggctccaaccccaactacctcgccgtgctcgtcaagttcgtcgccgacgacggtgacgtcatccagatggacctccaggaggccggattgccagcgtggaggcccatgaagctgtcgtggggcgccatctggaggatggacaccgccacgccactcaaggcacccttctccattcgcgtcaccaccgagtccggcaagagcctcatcgccaaagacgtcatcccggtcaactggatgccagacgccatctacgtatcaaacgtccagttctattgagatcggacggaaacgatcctcctaatttatttccctattaatttgttcaaatggtttccttctataacctatatttttcccgttgttagaaatggttccatttcctcctacagcttactttaagatagttgcgcttgtatatctgcgccatcttgtaagttgtaagatgctgaagaacactatgaattctgagcatctgattctccgggaagatttactatgataaacaacagtttgatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0548600, RefSeq:Os10g0548600