Difference between revisions of "Os10g0552400"

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(Created page with "{{JaponicaGene| GeneName = Os10g0552400| Description = U box domain containing protein| Version = NM_001071863.1 GI:115483321 GeneID:4349328| Length = 2337 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0552400|
 
GeneName = Os10g0552400|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0552400

Description

U box domain containing protein

Version

NM_001071863.1 GI:115483321 GeneID:4349328

Length

2337 bp

Definition

Oryza sativa Japonica Group Os10g0552400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22134374..22136710

Sequence Coding Region

22134386..22134530,22134743..22134864,22134994..22135115,22135230..22135334,22135422..22135512
,22135609..22135752,22135870..22136238,22136357..22136554

Expression

GEO Profiles:Os10g0552400

Genome Context

<gbrowseImage1> name=NC_008403:22134374..22136710 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22134374..22136710 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccggagaaggtgttcgtggcgctgccggcggaggcgaagtccggcaggtcgacgctgtcgtgggctctcggccatttccgggccacggccatcgtcgtcacgcatgttcatgtgccgccgcagatgatccccgtcatgggagtcaagttccatgccagtaaactgaatccggagcaagtgagcttgttcagaatggctgagcgtgacaaggtggacaagcaattagatcactacgtcaatcaatgcctgaggatgaagatgaaatgtgagaagctagtcattgagaacgaaaatgttgtagacggtcttgttgaactaatcaacttgcatggagtgaccaagctagtaatttcagctgccccagacaggaattactcaagaaaaatggacaaacctgcatccaggacagcaacagaaattatgcagagagctgacccatcatgcaagatttggtttgtctgcaaagaacggttaatctgtacaagtggcgtggaagtagaaattgcacctggacatacgcctttcattcctgatactggtcacgatgctctgcagttgacacttcaccaggaacaggatgacaacaatgaatcggaactgggtttttacgatgagatcaaagaagcatgcaaagcagctgacaacttaatgatgagagctttaagagaatcttacagacggcagaaagcagacgaagaagtagtttcatctcttcagaaagccaaagaatacgaggagctgtacttggaggaggttaaaaagaggaaagaactggaagaagcacttctgagagcaagcgaagaaattgcacagttaaaacaagaaagagatctacccaagaatgatcagaacacaaccatggaggaacagaaagaagtgatttcagacaatttgatcttagaggcctccgggcaaataattaagccgctgcaagagtatcttgatcatgatgagaactgtgtcagagaaccggagacgttgctcatacaaaggaagctagctgcatcattttctccatcatcagtgatgcagtcgcctttcgatgaagactgctgcatcccttcatacttcatctgcccaatccttcaggaggttatgagggagccttgcattgcatcagacggattcacctacgaaaccgatgcgatcagatcctggcttgatggaggacggagggtatctcccattacaggacagccgattgtgcaccagcagctaattccaaacctttctctccgttctgtcatccaagatcatgcaaggaggaatcagtattcattttcctga</cdnaseq>

Protein Sequence

<aaseq>MAAPEKVFVALPAEAKSGRSTLSWALGHFRATAIVVTHVHVPPQ MIPVMGVKFHASKLNPEQVSLFRMAERDKVDKQLDHYVNQCLRMKMKCEKLVIENENV VDGLVELINLHGVTKLVISAAPDRNYSRKMDKPASRTATEIMQRADPSCKIWFVCKER LICTSGVEVEIAPGHTPFIPDTGHDALQLTLHQEQDDNNESELGFYDEIKEACKAADN LMMRALRESYRRQKADEEVVSSLQKAKEYEELYLEEVKKRKELEEALLRASEEIAQLK QERDLPKNDQNTTMEEQKEVISDNLILEASGQIIKPLQEYLDHDENCVREPETLLIQR KLAASFSPSSVMQSPFDEDCCIPSYFICPILQEVMREPCIASDGFTYETDAIRSWLDG GRRVSPITGQPIVHQQLIPNLSLRSVIQDHARRNQYSFS</aaseq>

Gene Sequence

<dnaseqindica>13..157#370..491#621..742#857..961#1049..1139#1236..1379#1497..1865#1984..2181#gaaggtcggtcgatggcggcgccggagaaggtgttcgtggcgctgccggcggaggcgaagtccggcaggtcgacgctgtcgtgggctctcggccatttccgggccacggccatcgtcgtcacgcatgttcatgtgccgccgcagatgatccccgtcagtacgtaactgcatcatccgattgtttttcttctcttcttcttttttttctgaaagatttcatggttatatgtatggttgtccggccaaaaattcatggaaaccatggattagttcatgggtttgtgactcctcttagccctttcaattcagaagactgagaaatttggctataatctgtctagtgttgtattgattctgttttggtcgcagtgggagtcaagttccatgccagtaaactgaatccggagcaagtgagcttgttcagaatggctgagcgtgacaaggtggacaagcaattagatcactacgtcaatcaatgcctgaggatgaaggtgtgacgggttctgttaattcctgtgaattcattatctcaagatggctttggcttgttattgacagccgttttttatttagaactacagcttattgacagtttttttttcattgtctgtatatttcagatgaaatgtgagaagctagtcattgagaacgaaaatgttgtagacggtcttgttgaactaatcaacttgcatggagtgaccaagctagtaatttcagctgccccagacaggaattactcaaggtaaatatttcttctaagaaaatataacacttgaaatgcaaagctttattttgtaattgaagacaaaataaattatgcagagagctgaccaataattgttgttttctgtttcagaaaaatggacaaacctgcatccaggacagcaacagaaattatgcagagagctgacccatcatgcaagatttggtttgtctgcaaagaacggttaatctgtacaaggtaaaaaccttttagtagtaattttgcgatttatgatgattactgaatagtgaagctcaaaaatctctgattcattttccatgatagtggcgtggaagtagaaattgcacctggacatacgcctttcattcctgatactggtcacgatgctctgcagttgacacttcaccaggaacaggttcttctgatcttgcaatgccatcttatggtttcgaatattttgtcttgtaagagtgatgacataatatggtgatttccttttccaattatttaggatgacaacaatgaatcggaactgggtttttacgatgagatcaaagaagcatgcaaagcagctgacaacttaatgatgagagctttaagagaatcttacagacggcagaaagcagacgaagaagtagtttcatctcttcagaaagtaattcgttgtcctttgactattttattcagaaacgagaccacttagaaaaaaaaacatccagatttcatatgaatatattcttcagaattttgatcagaactctgaaccttacaggccaaagaatacgaggagctgtacttggaggaggttaaaaagaggaaagaactggaagaagcacttctgagagcaagcgaagaaattgcacagttaaaacaagaaagagatctacccaagaatgatcagaacacaaccatggaggaacagaaagaagtgatttcagacaatttgatcttagaggcctccgggcaaataattaagccgctgcaagagtatcttgatcatgatgagaactgtgtcagagaaccggagacgttgctcatacaaaggaagctagctgcatcattttctccatcatcagtgatgcagtcgcctttcgatgaagactgctgcatcccttcatacttcatctgcccaatccttcaggtattcaatgaaaagttctgcacataacttagcactgctccttgtgtagattaacacaaatacttgtcacttgtgatgaattgaaatagaaatttgatcatttgcattgtaatggcaggaggttatgagggagccttgcattgcatcagacggattcacctacgaaaccgatgcgatcagatcctggcttgatggaggacggagggtatctcccattacaggacagccgattgtgcaccagcagctaattccaaacctttctctccgttctgtcatccaagatcatgcaaggaggaatcagtattcattttcctgatgtaacctttaattacgaactgtattggtggcatatatatatatatatatgtgccattatttcctgtaaatttcttagctatcactatgacagtatagccagttcggaaactgcacaactcacagaatgcagaaagaaaatgctttgattttgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0552400, RefSeq:Os10g0552400