Difference between revisions of "Os10g0565700"

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(Created page with "{{JaponicaGene| GeneName = Os10g0565700| Description = SNF2-related domain containing protein| Version = NM_001189346.1 GI:297727822 GeneID:9270485| Length = 10515 bp| De...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0565700|
 
GeneName = Os10g0565700|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0565700

Description

SNF2-related domain containing protein

Version

NM_001189346.1 GI:297727822 GeneID:9270485

Length

10515 bp

Definition

Oryza sativa Japonica Group Os10g0565700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22855607..22866121

Sequence Coding Region

22864877..22864975,22865060..22865206,22865299..22865421,22865503..22865577,22865667..22865921

Expression

GEO Profiles:Os10g0565700

Genome Context

<gbrowseImage1> name=NC_008403:22855607..22866121 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22855607..22866121 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaacgacaggacaaagctctttgattctttatgtagaattgattgtacacacagaattttgatgactgggacgctcatccaaaacaacttgacggaattttatgcgctgatgaacttctgttgtcctaatctacttggagagtccggacaatttcatgaaaacttcagcatgccaattgaaagggctagatatagaggcgcatctgcgcaattgataaaagagtcaatagaagcatctgagaggctgaagaaacttgttagcccttttgtattgagaaggacgaaagagatgttaaagaatagcgcctctaaacttggtactaaacatgaattgactgtgtggttgaagatctctgctgctcaagaatatctttacaccaatcttatcatgagcaatgttttgggagatgagcctggcacacctttggcagcttctcaagttgcgaggagtatctgcaatcacccagtaatggtgattggttctgactttgaacagaggggtgaatcagaagagaagaaggatgctttaactgacattatccgaaaaggtttattggcggtcagtaacatcgaggatattgaagtcgacgactacagtttgtccagcaaagtagcttttactttatatttggtggataggctcatcaaggaagatataagatcttgttattttctcaatctccacgaacattga</cdnaseq>

Protein Sequence

<aaseq>MKNDRTKLFDSLCRIDCTHRILMTGTLIQNNLTEFYALMNFCCP NLLGESGQFHENFSMPIERARYRGASAQLIKESIEASERLKKLVSPFVLRRTKEMLKN SASKLGTKHELTVWLKISAAQEYLYTNLIMSNVLGDEPGTPLAASQVARSICNHPVMV IGSDFEQRGESEEKKDALTDIIRKGLLAVSNIEDIEVDDYSLSSKVAFTLYLVDRLIK EDIRSCYFLNLHEH</aaseq>

Gene Sequence

<dnaseqindica>9271..9369#9454..9600#9693..9815#9897..9971#10061..10315#aagagagagagagagagagagggagagggcagtgcgccgcggaagagacagctggaacccgatcacgcgcgcctacccgtccgtagaatcggcggcggcggcggcggccgcgctcgtctccggcgccgacgagctcctcgaccacggagaacgcgcggaccgcggccatgtcgaagaagaaggcgcccacgtccatcccgtgcgagctccccctcgccttagaccctagcgtgtaagttgccccaaaccctaacccctatcgcgattctttggtggtgtggccgtgtgcgattctttggtcccgtggtggcgatgttgtgtaggtcctgagcattctcgttcttgcagctccgcgcgcccatcggatcgtcctgtggcctcccagtcttccgcacgtcccccttttccggcagcctccgccgctgccgctgcgcctgcggctgcgcccgcggttcgttcgctcgtcgccaactcttctggcatggacacccgattcgacgaggacgaacggacaaccgccgccacgcggcgccgccagtcgccctctccttcttttgcaccatcgacgtcgaaggcgacggcggtgggactcactagatacggtgctgtcaagtcctgggggccgaggagggagctggaaactggggagaccagtaggtgcatggaggtgctactgctagagaacccaatcgatgctacaaaaccatctcctctccatgttgatgaagacaagcaggttatatattatttttgctccgatcccatctgtacgtgttgatccaactctaaatggaattatcacgttttccatctatattagctagctactgtagtggacttaatcggatgtttgcaaaagtttctaacagagatcttcatgcaagtgaaataacactattaaggtgctcctaatttgcttcatttgatatgtaatatgtatgaaatgccatggtgaacctttcatattttttccccttttttgaaaactatttgttcttttctctttctggataactgttccatagttggttccaatggttgctaatgctgtgcagggtgaggttattggtggtacccaacagaatgctccagagagctgtgtaacggagcgagcacgactgaatctgaaatctcgctccagtgcagtgggacaatctgctggcagtcctctcaaggaaaggtaggtggtcttgtagcccttttttgtatttcccttttcttttctataagttcatggattttctagttttatcatctgagtcttgctgttagctaccttatatatatattgaccgctatatgtgcagtacacttagcctgtccaagcacattcattaaatgccattaatgtttcattaaattttgaagtttcaagtatccgtcctgtttattgatatatgattgatgtcaaataggtgtatttagaagggaaaatttatctctgatgtttctgttcagtatgtacattcccaaaatgcatgcacatcctgtgcaattaagaatgactcttcattttgtttgactttaccttgttggaagactaaagctactcgcgatattgtcgattcaaggatcatcttttttctttgttgtaatacatgtttacacttcctacctatcagggtcagtttatattgatagccaatgctgatccctttaggttgtattgagtatttatttgtgggaaaccacttccctctggttccactgcacattatatgtgtgatgtgatttgtttattgacatttagatgcaccattagaaataaattgtgcttcttagtggctgcacgaacaatggataaattcatatgtgtaatgagtggctgaaaatgtataagggcatctggatattactatctttaatttggctccataatccccattccttgttttttttaatctttggaagcttggaattttttttgaggatttatactgatgttgaatttgcccgcaaattaatatgctattacatcttatgccttaaagctagaccttatctaactttggttttatctttctacattccacatggtagaattctggctccatcaacagcaatgaaaagagcaacggagaacaaatatttggcgaacttgaagacagatattgttgagaaggcgttgaaatatgatagaaaagagaaaatgaaggaggttatgaggctgatgatattccagaggagggttttgtattagagcctacaggtcacggaaatgggaagcaatttcgtcttccgcactctttgtatgatgtcctccacacttatcagaaagaaggtatcaagtggctatggacattgcatctcaagaaattaggaggtgcactatgtgatgaaatgggcatgggaaagacccggcaggtaaattacatgcaatggtttgttctttaggtgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcactaaatacaaaagccatacctacccgagggaggttggatacatatatatagccatagctggctgctagcctattgctgcaccctcctagtctaaaattcgaaatttgaatgggatgctgtcctagagggcatccaaactgaataaagcataaaggaggcataaaggagatgctaactgctgcagtcctactaaccgcagctgtcctagcaactgaaaaatatgctaaagggtagatgctgtcctgaaaaaggtgaaactacccaaaagcaaaaagaagaatcacgaccaaggaccacaaagacttatccaacattctccccctaagtcttgtgcgtcgtcttgtggggaagttgggccatcccgatcctggagcagagctcgaggaacttgatcctcccaagaggcttggtgagcaagtccgcaagctggtccttggtgttgatgtagctcgccttgatgctcccttcctccaagtagcttcggatgaagtggtacctcacccggatgtgcttgctccgttagtgaaaaacggggttctttgccagggccagagcggacttgctatccaccctgagctccaccgttctagtgtctctgccgaggagatcactaagcagtcgagcaagccagagcgcctgggtcgaagcggcggaggccgccatgtactcggcctcgcagctggacagggccaccacctgctgcttgaccgactgccagctaacgaggcacttgccgaggaagaagagaatcccgctcgtgctcttgctggtgtcgatgtcgccggcgtggtcgctgtcgctgtacccgacgaagtgtgccttgccaggacacctcgggtagtagagaccgtggtcgagagtccccgcaacgtagcggatgatcctcttcacagcctgctggtgctccgtcgtcggtcgctgcatgaaccgactgacgtagccgacggagaaggccaagtccggccgtgtgtgggtgaggtagcgaaggctccccacaagacgtcggtactgtgtagcatccacctcctccgccgtgctgtcgcggctcagcttcagtctctcctccatcggagtgagagctgggttgcaatcggtgagcccagccagctcaacgacgcgcttggcgtaggcggtctgtcgaagcgtgatcccggagttgtcctggtgcacttcgatccccaggtagaaggagagaggccccaaatcactcatctagaaggtggccttcatctcctccttgaacgccgcgacctccgcatccttggtgccggtgatcaccaagtcgtcgacgtagacacccactagcaaggcatttcctccattgccccgccggtagatggccgcctcgtgcgggctttgctcgaagcccatccccttgagcgtggaatccaacttggcattccacgccctcggtgcctgccgcaagccgtagagggccttgtgcaggcgtagcaccttgccctccttgccggggatcacaaatcccggcggctggtgcacgtagacctcctccttcaagtcgccgtttagaaacgccgacttgacgtccatgtgatggacgccccagccttcccgagcagccagcgcaaggagtcgcacagactccatccgtgccacgggagcgaaggcatcgtcgtagtcgatcccctcctgctgcacgaaaccgcgtgccaccaagcgagccttgtgcttgatgatggctccggcttcatccctcttcagcttgaacacccacttaagggtgatcgcgcggtgaccacgagggaggtcagcaagctcccaggtgcggttctcctgaaccgcgtccatctccgactgcatcgcggcacgccatgccgcgtgtttctcggcctctacaaaagaccgaggctcaccgtcgtcgcacgcaaggtgcaactgcgcctctaggtcgcgaggcaccagtcccggcaccggctggtcgccgagaagatcctccatcgtacggtaccgtagctgctcgccgtcgtggtacgcgtcgatgcgctccccgtcgtgggagagcggagtagcgaactccaccgggctgcgctcaacacgagctggcgtcggagtagacgtgcttggaggagtggctgttggtgctggagcatgtggagtcactggctggggttgtgtcgacgaagagctcgtcgtagtcgaagtcgtggcccgagggtgtgttggtgtcggagtcggtggagattcgggggctggggtagacacgctaggtgaagaagagctgcctactcccccagctccctcgaagtggacgtactcgacggtgaagtcgtcgtacgtcggagtcgaaccatcgtccaccgccttgtcccatacccaccctcgcccttcgtcgaacacaacgtcgcgcgcagtgcgcacacgctgtgtctccgggtcgaggatgcggtaggccttcgagccctccgcgtagccgatgaacacccctggggtgctcctgtcgtcgagcttgccgatgtggccaagctccttggcgaacgcgaggcagccgaagacccgcaggtgggagaccgccggcttgcgcccatgccaagcctcgtacggtgtcctgccatcgagggccttggtaggcgagcggttgaggatgtaggcggccgtcaccaccgcctgcccccagaagatggccggcatccccctctgcttgaggagggcccgagccatccccacaaccgtctggttgcgccgctcgacgacgccgttctgctgcgggctgtacggcgtggtgtagtggcgctgaatgccctcatcagcgcagtacgacgcgaattcagccgctgtgaattcgccgccgttgtcagtgcgcagcacgcgcagcttgcggccgcactccgcctttgcagcagcctgcgcatgcctgatggcgtccgcagcctctcccttgctgccgaggaccatcacccacatgtagcgggagaggtcgtcgacgagcagcaggaagtaacgtcgtcctcctggtgtggctggtgtcactgggccacacaagtccccgtgcacgagctcgagccgctccttggctcggaagctcgtctgctggggaaaggggagccgccgctgcttcgtcaccacgcagacgtcgcagagctgctccacgtggtcaagacacggcatgcctcgcaccatctccttggcactgagctgcttcagggcctcgaagtggaggtgcccgaagcgctcgtgccactgccacgcctcgtcgtcccgatgagcggcgaggcaaactggttgtgcgacctgcacgttgaggatgtcgagtcgattagtgcctctggttaccttggcaagaaggcgacgacggcgatcccaaatcctcatgagtccgtcctcgaccaacacgcgtgagccgttctcatccagctgtcccacgctgatgatagaattcctcaacgcagggatgtagtagactccggtgagcagcctgtgctcaccggacttggcggtgaaggtgacggagccaacacccttgatctccacgccggaggcgtccccgaacttgacggagcctcggacgctggagtcgaactcggtgaagaactcccgtcggccggtcatgtgatgggtggcgccggtgtcgaggtaccacccatcagccttgtcgttgctggagccgttgcagagggagacgagtaccttcggctcatcaaggtggaggaaagccgctgcggccggtgccgctggaggtagctcgatgcttgcgtgagccaggagcagagccggctcttcctccacccgtgcgacgtgggcctggccacgtcgtggctgtcgacagtctttggcccaatggccaagcttgccacagttgcggcaggcgtcgtctcgtgccggcttgtggttgccggtggcaacgccctgggcgcctctgcgggcgccaccctcggcacgtcttcgcgcccaccgtagctggacacctccccgcgccttgcgcggcttacggccgcctgtcggggaagatgactcccccttcctcccgtcaccctgagaggcctcccactgctcccgagtgagatggagcttcccgccgatggtgatgggccccgagagaggctgtggctcatcaccatcgacgaccttgaggcgacctaacgcctcctcgatcgacatcgtggagaggtccagcagagattcaatcgagcgagcgatctacctgtacttctcagggacgcagcggaagagcttctcgacagctctctcctcatcgtaggtgtcgtcaccgtactgcaccattttctgcaagagagtgttgagacggagagcaaagtcatcaacatcctcacctggcttgaaggccaggttctcccactccttgcggagtgcctgcagtgtggacttgcgggcgcggtcgctgccgatgcgtgccgcagcgatggcgtcccaggcctccttggcagtccgcttttgggaaagcgagaactgcatctcgggcgggactgcagcgatgagggcatctagtgcccgccgatcctcgtcgtagtcgacgtcaccgtaccggactgcttcccacatgtgccgcacctggagcctcaccctcatcatcgcggcccactcgatgtagttggttttggtgagggtaggccaccgacgggaccaaagtctctgaccaccgtctggacgccgtggtgaccatggcgccggtcaggggagagagagccgtgctgcctgcaagggccgcgtgcgggctccgggctgccgccggcacgcctgcgcccgtctgggttcccgtcggcgggcgcgcggtcccttgggccgccgccgccgccgtggacgtgggctgctgctcaccgctctgctcgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcggtgatgtcgccggcgatggagccgttgatgttgctgcgcaaggtctcaacctctacctccgccgcacgtgccgcatcttccgccgcctccgcctccgcctccgccctggctgctgccaactccgctgccgccagtctggctgccctcgctgctgctgcagcggtctgagccgttgctcgcctgcgctcttctgctgcggcgagctcggcgtcctgctgacgccgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctccggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgttgctgctgctggctaagagctcaaccgagcttgggagggggtggaacaagagatgtttagtctacaggaaagtatggctctgataccagatgttagaatttcaatggttactctcattgagaagaggatggcactcgagatggggcaattttctggttttcttcattcactaaacacaaaagccatacctacccgagggaggttggatacatatatatagccatagctggctgctagcctattgctgcaccctcctagtctaaaattcgaaatttgaatgggatgctgtcctagagggcatccaaactgaataaagcataaaggaggcataaaggagatgctaactgctgctgtcctactaaccgcagctgtcctagcaactgaaaaatatgctaaagggtagatgctgtcctgaaaaaggtgaaactatccaaaagcaaaaagaagaatcacgaccaaggaccacaaagacttatccaacattaggcaccacacgccccaaaattagctatataaatgcattttattttgtttatgttccaggtagctgcttttcttcgtggtttgctccaggcagatgtcatacacaacgcaatgatcatttgcccagtcacggtgatagaaacctggcgcaaagaacttaatattgttggtgtgctggttatcaaagtgtaagtttacatgatataactatttatctagttgtttcagtaatgatatctagttattttgtcagttttaatggatttgttttctcttgcaggttccgttatgatagaagaaccgactgcattgcactaaaaagcatagctactgttagcctgcactctactttaatgtttttgcattattctttttatccattaaacttgcttgttattttttcttttgattggattgaattcaatctgtcatgttaccacttatgccatttatttgatggacaatgtttatctattgaatttaatttattgaaaacaatcacattaaaactgtgattatagtcgatatctgtcagagttaccgattctattttttggtaggttgccttccattaatttttactgtcatcccatacagcctttgcttaactactttctatgagttagaagaaatgctacagctgataatataaaatgagatagatgcaacaccaaagtttccttacttgagattcaagacttgaccacactatcttaccttttgtgtttgtgtttgtggttttgggaatggggtgggggtggggtctggaatggttaaacctcactattgctcaactcataagcccgtgattatttttagaagaccagtacccattttattaatgcatcataaaagatggaatactgcttctaccctcgcttctatgcaagtagtcttgaaagatccctaacacagagaatcacattacttgctgatttgctatcctgaatcttggtatggtggttgctataggtattcagatgaaatattttgactcaatatccatctcctgtgcaggatggaggtgtccttataacaacatttgaagcagtccgggaccatattcaccgcattctggagacggggcacggcttgggattatattgttatcgatgaagcgcacaggatgaagaacgacaggacaaagctctttgattctttatgtagaattgattgtacacacagaattttgatgactgggacgctcatccaaaacaacttgacggtacaccctctccaaccacaatagtcataaagaaatttggttgtttatttttgtttacttatttgtaacggaacctacctgcaggaattttatgcgctgatgaacttctgttgtcctaatctacttggagagtccggacaatttcatgaaaacttcagcatgccaattgaaagggctagatatagaggcgcatctgcgcaattgataaaagagtcaatagaagcatctgaggtaaataccttctgttctacatacaggcaaaataatttctatttttctggttggtacaaatatcctgaacaagcttgatttgtattctgcagaggctgaagaaacttgttagcccttttgtattgagaaggacgaaagagatgttaaagaatagcgcctctaaacttggtactaaacatgaattgactgtgtggttgaagatctctgctgctcaagtaaacttactaaagcttatcaatatgttatcaaaatttattcgtcatctttaacttctttttttttcttactctccacaggaatatctttacaccaatcttatcatgagcaatgttttgggagatgagcctggcacacctttggcagcttctcaagtaatctcccctacaatctgaagtctattttttgtcaactctaccttttgatgtacggatctttcacctttgtttttgtctaatcacaggttgcgaggagtatctgcaatcacccagtaatggtgattggttctgactttgaacagaggggtgaatcagaagagaagaaggatgctttaactgacattatccgaaaaggtttattggcggtcagtaacatcgaggatattgaagtcgacgactacagtttgtccagcaaagtagcttttactttatatttggtggataggctcatcaaggaagatataagatcttgttattttctcaatctccacgaacattgacgatgatagaggtagtttctaacaatagttgcataactctctttttgccgggtcagccaaaggttggccaaccaatttcttaagattggggagaaaaacaaaggaatgttacagcgacattacaatgtcgcgctagtccgggagagatcccagacacagcgtgaacaagcgaaagagaaatagacaatacaacaacgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0565700, RefSeq:Os10g0565700