Difference between revisions of "Os11g0162300"

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(Created page with "{{JaponicaGene| GeneName = Os11g0162300| Description = Conserved hypothetical protein| Version = NM_001072360.2 GI:297611289 GeneID:4349860| Length = 5295 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0162300|
 
GeneName = Os11g0162300|

Revision as of 21:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0162300

Description

Conserved hypothetical protein

Version

NM_001072360.2 GI:297611289 GeneID:4349860

Length

5295 bp

Definition

Oryza sativa Japonica Group Os11g0162300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3023219..3028513

Sequence Coding Region

3023219..3023256,3023764..3024070,3024618..3024764,3024849..3025016,3025098..3025356
,3026211..3026432,3026773..3026847,3028338..3028513

Expression

GEO Profiles:Os11g0162300

Genome Context

<gbrowseImage1> name=NC_008404:3023219..3028513 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3023219..3028513 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatcctagcatatctgttcctactggtggtcgccatcatcggtgtgttcgccgttctcgcgtccctgctcgaccccatccacggcttctacctgcgatcgatcaaggaagcactcgagtgggccgagttcatattcacttggacaagctcgctgtactttatactgcccatagagcgtgtcgagggagccaagggaacttggaggaggagggagcttggagggcgtgatgatggcagggtaaaacaagagccgccgcccgcgcttcgcccactcgtgtcgaagggccgccgtctgctcgttccagaggttcacggcccgcacgccacccgcctgcgtgtcgtcagcccactcgcgccggaggtcccgttgtccgcccgtgtgcgccggagggccgccgccgtcgccctcgtgccgcctacccgcaccggatttgggagaggtgagggttacaggaaagagagagagggggtcttcttctcgaatgccacaaattgggcttcaactttctatgattgctttaccccgctaacactgtggttagaggggatttactctggaatcgttctgctcctcttcgtgctctttattggaaatctggatgaaaactggggccgcataatgatagagttttctggggtggccatacagatggctggaatattttgctttgtgatgataaaggtgtcacgtgatgacaattacacgatgaaagaagctcaaaaacagagtatcatggcccttgtcatcttcaagattttctcttttattatccttacgttcatcaaggctaagttggtgcccacagaagataacgtcgtgatcccaagagcatttgctgccataggttgtctgatccaatttgtgctaatgttgagttcgcctatcggccgttggttggacaacaattttaatgatgatgagcctaccacccgcaagatcaagttgtcggcagctctgatcaggctaatcacgctatcattcgactgctggcttttcactgtaagaggatactggagctcgccactgaagaagccattggcggaaatgacagcaaccaacttggtctttaccagcattgtggtggtctgtcgttacataggccccaacaagctcaggaacttttgtgttgatatttggaattggcttcgggctgtcccggaaaagcttcaaggcaagtggaatagcttcatacagtggaagaccgacaactggactccattcacgaatacagtgaaggtagcattacagagtttctgtactggctgttgcgctatgtttcaaactgggtggaatgcattgaagaacagggtgagtcaatgcattgaggacatgtggaatatactggctgaaatgacgatccatgtccacaatgctcagaccgaataa</cdnaseq>

Protein Sequence

<aaseq>MGILAYLFLLVVAIIGVFAVLASLLDPIHGFYLRSIKEALEWAE FIFTWTSSLYFILPIERVEGAKGTWRRRELGGRDDGRVKQEPPPALRPLVSKGRRLLV PEVHGPHATRLRVVSPLAPEVPLSARVRRRAAAVALVPPTRTGFGRGEGYRKEREGVF FSNATNWASTFYDCFTPLTLWLEGIYSGIVLLLFVLFIGNLDENWGRIMIEFSGVAIQ MAGIFCFVMIKVSRDDNYTMKEAQKQSIMALVIFKIFSFIILTFIKAKLVPTEDNVVI PRAFAAIGCLIQFVLMLSSPIGRWLDNNFNDDEPTTRKIKLSAALIRLITLSFDCWLF TVRGYWSSPLKKPLAEMTATNLVFTSIVVVCRYIGPNKLRNFCVDIWNWLRAVPEKLQ GKWNSFIQWKTDNWTPFTNTVKVALQSFCTGCCAMFQTGWNALKNRVSQCIEDMWNIL AEMTIHVHNAQTE</aaseq>

Gene Sequence

<dnaseqindica>5258..5295#4444..4750#3750..3896#3498..3665#3158..3416#2082..2303#1667..1741#1..176#atggggatcctagcatatctgttcctactggtggtcgccatcatcggtgtgttcgccgttctcgcgtccctgctcgaccccatccacggcttctacctgcgatcgatcaaggaagcactcgagtgggccgagttcatattcacttggacaagctcgctgtactttatactgcccatgtatgtagtactatatattatccttctctgatatatatcgatcgatccagatgcactgggatgggatggtttaaatatattcctgataaagctttggccttgcatgatgcactgggatggtttaaattcctgataaagttttggccttgcatgattgaatgttcaaaaccccaatccctagctagttgcatggctgatatgtatcttgtgttgttttcccctgcctcaagaacacgcgcgcgcgttgttggtttgttgttattattgctcctgtttgattgatttatagcgggttcaaactaggagtgcagagtagtacggttatatataatcagcgggcccatacggaaagaaaataggtagagaaatggggagggagaaatagatcattcttttttcgctcttagatcatttcgcaacataatatgatgctagcccgtgtaatacacacaccttgtttgaagtgagagtaacattaattatattgtgtttttatttgatatggacttctggactacattctttttcttacatgattgtttgattatatttttacacatgtcatgccatttttttcttgtgagacctctatccaaatctgatgtagtacgacttgttgtttactttccactgatttcttctctggattacctattttattcttcgtgtgtgtttagttcacgccaaaatttgaagtttagttcaaattggaacgatgtgatggaaaagttgtaagtttgtgtgtgtaggaaagttttgatgtgatggaaaagttggaagtctgaagaaaaagtttggaactaaactcggccttcattctttcattactaacttagtcatgcacgtgcaatacacgttttccacaaaatatatcagtgcattgaaattttgaaaattattatctgctaaaattaacctctttaacccaaatttataaaatatatacccctttgtaactggaaaaacaaaattaaccaacattatcggtacttggtattcacttaggacttcatcaacataaacttccatgtactgatcttaggcatattactagtatacgaaccacagccaattgaagtaaaatattcacatttgctggaccttgaaatgggagaagcacatagattatacatacttcaaatttttttgtgtggttgtatatgccatcctaacaaattcaggtttgaatcaattaaatagcatgatatctttgcttcttattgttgcatagtttgaatagattaaataacacaatatctttgttgagagacattctataactaaactaaaaaacaatctctgcttttttttccgtgctacaaataacgtgcaaaataaagccctatgaataaacaatgtgcaattattggagcggagaacagtgaggatggatggcctaggcggcgagtagggcaacagcgggcaacgaggaggatagttgtgtgggctggcggacggggttgcatggcgacgatctcttggtcgtcaagagagcgtgtcgagggagccaagggaacttggaggaggagggagcttggagggcgtgatgatggcagggtaaaacagtcttagggtctgtttggtagaattccaacgcctggatcctaactcctaactccaactccagtaggagctaactcctataggatctgagaatgatctaaaagtgtttggttagattgatcagttccaaaactcttaaaagagagaagggaggaaagatggacaatactgcccatggcttcttatatctgataatttcatgtttatttatatatgataattcatgtttgtgatagaatcacccacatgcatgcaaaatcactatttctcttccagatctgaaattgaaaaaaaaaaggaaaaatgcaaaaacaccggccgtgcgccgcccgctcgcgccagagagccgccgcccgcgcttcgcccactcgtgtcgaagggccgccgtctgctcgttccagaggttcacggcccgcacgccacccgcctgcgtgtcgtcagcccactcgcgccggaggtcccgttgtccgcccgtgtgcgccggagggccgccgccgtcgccctcgtgccgcctacccgcaccggatttgggagaggtgagggttacaggaaagagagagaggggtaaggaggtgggtttgaggtcgttcaatgacattttttgcgtaaataccttaaaaattaaagggtaatgtgtgttttggggtggagtggagagatggagcagcaaaaacccagctccacccccatagtacaattttgtggagcaactctgctagctccgctccaaaaaatgaaggatctagaccgtttgacacggcttcttctctaggtaagttggagttgggaggtagagctgtgccaaacaggtccttataatgtgtttgcgagggtccaggggataggatcggatcgagtgagttcacttgttggattgcatggcacatggtggagcttgaaatctggaccattggatgacatggttgaaaatgactaaggatagcatgtatacacttctcctgggtgaagctagcaaagagtatgaccggtgcttttcatattggaatagaaatagaaaaatacaaataaatagctggtttttaatgtttgacttattttgtatctcaatgttatatacttatatctaccattagttccttaaaattgtttggttaggcagttaaggcttgttacgctaccttttcaatctaccatactctgtttattgatggactaaactgctatttatatgtgcatcatcaattaggaactcttttaattgccatttttaaatttttatgtttaactatttgccatccatatgtcaattacatgtgggccctcgtatatctgacacgtgggtctagctagtggctaatagttaaatatctctagtatgatgtactctgtgatgcatgccccttttttttacttcttttgtatccattcatgtataattggtgaatttgtgaatacagggtcttcttctcgaatgccacaaattgggcttcaactttctatgattgctttaccccgctaacactgtggttagaggggatttactctggaatcgttctgctcctcttcgtgctctttattggaaatctggatgaaaactggggccgcataatgatagagttttctggggtggccatacagatggctggaatattttgctttgtgatgataaaggtgtcacgtgatgacaattacacgatgaaagaagctcaaaaacaggtatggataagggttcaagaattctgttatttcacacttataagaaacatgagattcattgaaaaaaaatctcctatgcagagtatcatggcccttgtcatcttcaagattttctcttttattatccttacgttcatcaaggctaagttggtgcccacagaagataacgtcgtgatcccaagagcatttgctgccataggttgtctgatccaatttgtgctaatgttgagttcgcctatcggccgttgggtaggtgatggctttctctcatttaaactctatatgtggttgttgaataagctttgttcttatttagtctttcttccttttcagttggacaacaattttaatgatgatgagcctaccacccgcaagatcaagttgtcggcagctctgatcaggctaatcacgctatcattcgactgctggcttttcactgtaagaggatactggagctcgccactgaagaagccattggcggtaagtgattcaaggttttaacccctctagattctgccaagaatggttcaagttattatttgttcaagtttaaaagttagggtgaaaaacaattagttttgtcgttgagggtgaaaatggacttccagcaattcaagggagataatggaatctactaaaagaatggataagtcctttttttactagttctattgttaccacttcaactttactcgatgtctatttgtcacctacacttataaaactagacaaacttcatcttaattatgattgtttctattgttagcttttgccctataaagaatcacactattatttttatgctatatatgttgctaacttgcatttttcccgcacatcatgtgcttaacatatctttactcctcacatcccttcactgtattatgcgatagaatgatgggagaaatgtgtggcatgtagagtcactgccatttttctaatgtttggggtgaaaattttacttggaacaaaattaagggtcatatataaatgtatttatcctagtatttctaatgtgtgcatgcaggaaatgacagcaaccaacttggtctttaccagcattgtggtggtctgtcgttacataggccccaacaagctcaggaacttttgtgttgatatttggaattggcttcgggctgtcccggaaaagcttcaaggcaagtggaatagcttcatacagtggaagaccgacaactggactccattcacgaatacagtgaaggtagcattacagagtttctgtactggctgttgcgctatgtttcaaactgggtggaatgcattgaagaacagggtgagtcaatgcattgaggacatgtggaatatactggctggtccgggtggaatgcattgaacatcaagatgagtcaatgggttgagctgtgttacttcagcagtaaagcagagtacaatatgcacgattttgttaatcgatctttacttatacaaagtttgttgatctttacttactagctgggttacttcagcagccggaggctgtgttcggacttttttttgttgagtgattagattttgttgaatgtattctcttccactatgacttccccggctgtattcatatagcgtttatgccaactgtatatagtcactaggtcagatatattaatatatagtgacacgtttgagtggggacgtatctaatgtaatttctgcttccattttcccgaactatagaaagcatgtttctacttactacttccaatattctgatattgttcttgtttccggcatcagaatgattctggtttgaaaaggtttaagaaatgcttggaacagttttctttcttttctcgatgctggtcgattacatgccaaaacagaaatgacgatccatgtccacaatgctcagaccgaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0162300, RefSeq:Os11g0162300