Difference between revisions of "Os11g0171300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0171300| Description = Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP)| Version = NM_001072394.1 GI:115484400 Gen...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0171300|
 
GeneName = Os11g0171300|

Revision as of 21:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0171300

Description

Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP)

Version

NM_001072394.1 GI:115484400 GeneID:4349897

Length

2971 bp

Definition

Oryza sativa Japonica Group Os11g0171300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3471845..3474815

Sequence Coding Region

3472210..3472488,3472827..3473096,3473198..3473288,3473393..3473502,3473679..3473948
,3474580..3474726

Expression

GEO Profiles:Os11g0171300

Genome Context

<gbrowseImage1> name=NC_008404:3471845..3474815 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3471845..3474815 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctgctactctcctcaagtcatctttccttcccaagaagtctgaatggggtgccacccgccaggctgccgcccccaagccggtgactgtctccatggttgtccgcgctggtgcctacgacgatgagcttgtcaagaccgcgaaaaccattgcatcaccaggaaggggtatccttgccatggatgagtcgaacgcgacctgcggtaagaggcttgcgtcaattggccttgagaacaccgaggccaaccgccaggcttaccggaccctccttgtcaccgcaccgggcttgggacagtacatctccggtgctatcctcttcgaggagactctgtaccagtcaactgtagatggcaagaagattgtcgacatcctcactgagcagaaaatcgttccaggtatcaaggtcgacaagggtcttgtgccccttgctggctccaacaacgagtcatggtgccaaggtctcgacggccttgcctcgcgcgaggcggcatactaccagcagggcgctcgcttcgccaagtggcgcactgttgtcagcatccccaacggcccatctgaactcgccgtgaaggaggctgcctggggccttgcccgctacgccgccatttctcaggacaacgggctggtgccgattgtcgagcctgagatcctcctcgacggtgagcatggcatcgacaggaccttcgaggtggcgcagaaggtgtgggcggagaccttcttctacatggccgagaacaatgtgatgttcgagggcatcctcctcaagccaagcatggtgacacccggtgccgagtgcaaggacagggccacccctgagcaagtatctgactacaccctcaagctcctccacagaaggatcccccctgccgtccccggcatcatgttcttgtcgggtgggcagtcggaggtggaggcgacgcagaacctgaacgcgatgaaccaggggcccaacccgtggcacgtgtcgttctcgtacgcgagggcgctgcagaacacgtgcctcaagacgtggggcgggcagccggagaacgtgaaggcggcgcaggacgcgctgctcctccgcgccaaggccaactcgctggcgcagctcggcaagtacaccagcgacggcgaggccgccgaggccaaggagggcatgttcgtcaagaactacgtctactaa</cdnaseq>

Protein Sequence

<aaseq>MASATLLKSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDE LVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYI SGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLA SREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEI LLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQV SDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNT CLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY</aaseq>

Gene Sequence

<dnaseqindica>2328..2606#1720..1989#1528..1618#1314..1423#868..1137#90..236#ctctaaggaaagactgcaaagaaaaggcctgtgtcaaggagagggtagtagcaccttgctctcctttgccttcagagaaaccggaagcaatggcgtctgctactctcctcaagtcatctttccttcccaagaagtctgaatggggtgccacccgccaggctgccgcccccaagccggtgactgtctccatggttgtccgcgctggtgcctacgacgatgagcttgtcaagaccgcggtatgctttctgaatatcatccgtactgttctatggtttttggcatgcatttgtttcctctttatatcaatgacaagtgaaggaactttatgtagttttatgatagatataagcactttatcgtcaggaaatcaaataggatgtgcagtcaagctaagttatatatagcagaattcagtgaacataaaacacttgttttgatataacatgattcaaatatactggcatctctagttcaaatctactcttcaaagttatataatgcatttgaaggaaaatttctatcttcaacttcacagaaagcaaaatagatatgatttgtgtataccaaatgaacttagagactcaaaatatactagtaatacatttgtaaactcgacatctgcatcaagacatgacatgggttaaccactagcagttgtaaggataaagcatgaagcattcatgtgtcctgcttatgttctatgaaccatctgcaggtcataattcagaagaaaagtttggaacttctaatcctacaacataacaagcatacttttatcaactttggataataaattcttaagatgagtttttcattcaattatggttcagaactagaagattaaaaactttatccttcttgctgtagaaaaccattgcatcaccaggaaggggtatccttgccatggatgagtcgaacgcgacctgcggtaagaggcttgcgtcaattggccttgagaacaccgaggccaaccgccaggcttaccggaccctccttgtcaccgcaccgggcttgggacagtacatctccggtgctatcctcttcgaggagactctgtaccagtcaactgtagatggcaagaagattgtcgacatcctcactgagcagaaaatcgttccaggtatcaaggtcgacaaggtatgaatttcactccaaactgacccctgatccttgttgctcattcaaagtagtatcaaatttattaaagctgttaaagaactgaatgtgttagagttgttattactagagaaaatcattgttctagattgaaggaactacaacattaattcttctgaatttgtgctcgatgtcagggtcttgtgccccttgctggctccaacaacgagtcatggtgccaaggtctcgacggccttgcctcgcgcgaggcggcatactaccagcagggcgctcgcttcgccaagtggtgagacaaatttttcacctacaaatataatggccagttacctttcacatactatcatttgtggatatcattccagtgtctgacatgaagttcttcatcttcaggcgcactgttgtcagcatccccaacggcccatctgaactcgccgtgaaggaggctgcctggggccttgcccgctacgccgccatttctcaggtacatatcaaacttgattacagaacaaaaactgcaagaacataataaatctctttcctgatgatgctgcaagcatgaacaattttcttgaataatactaggacaacgggctggtgccgattgtcgagcctgagatcctcctcgacggtgagcatggcatcgacaggaccttcgaggtggcgcagaaggtgtgggcggagaccttcttctacatggccgagaacaatgtgatgttcgagggcatcctcctcaagccaagcatggtgacacccggtgccgagtgcaaggacagggccacccctgagcaagtatctgactacaccctcaagctcctccacagaaggatcccccctgccgtccccggcatcatggtcagcattctaccactgataaagaaactgaaactaaagcttaggaagctactaatattgctttacttcttgcaaaatggcttaacctgacttggaatgttgatcaagaaactgccgctgcaaatgttaaaagcttaacctgattcttcttgcaaaatggcttaacctgactggaaatgttgatcaagaaactgccactgcaaatgttgatctgctaattctgacatgattcttcttgcacaacgatactactaactgtctctgcagatgtagatgatcaagaataaacctgaaagtagagctgatcgataatattgattgattgttgtttggtgcagttcttgtcgggtgggcagtcggaggtggaggcgacgcagaacctgaacgcgatgaaccaggggcccaacccgtggcacgtgtcgttctcgtacgcgagggcgctgcagaacacgtgcctcaagacgtggggcgggcagccggagaacgtgaaggcggcgcaggacgcgctgctcctccgcgccaaggccaactcgctggcgcagctcggcaagtacaccagcgacggcgaggccgccgaggccaaggagggcatgttcgtcaagaactacgtctactaatccgatccaatccaatcaagacagtgaacctgctgctgctgctgctacgtactacagctactgctatactgctagtacctcgagggcactgtagccagtgtgtcgtcacagttacaggttgagatcgatggacaaagttaaaactatactgcattaattaattttaccttgagaacatacgtggttcatcatgtatttcatcacatgaatcttttctagagcgtttgatatacatacctcgtgttttgcctctgcaataaccttgtgtgtagacgaatctgtatactacctgtatgtgtggcctgtgaatcgatttggttactgcaaagttttgcgtatatatacatgcttgtgattctggaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0171300, RefSeq:Os11g0171300