Difference between revisions of "Os11g0242500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0242500| Description = Similar to Cyclin dependent kinase C| Version = NM_001074122.1 GI:115484892 GeneID:4350173| Length = 5561 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0242500|
 
GeneName = Os11g0242500|

Revision as of 21:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0242500

Description

Similar to Cyclin dependent kinase C

Version

NM_001074122.1 GI:115484892 GeneID:4350173

Length

5561 bp

Definition

Oryza sativa Japonica Group Os11g0242500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7646048..7651608

Sequence Coding Region

7646841..7647407,7647532..7647816,7647895..7648212,7648300..7648527,7649350..7649450
,7649540..7649621,7649918..7650076

Expression

GEO Profiles:Os11g0242500

Genome Context

<gbrowseImage1> name=NC_008404:7646048..7651608 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7646048..7651608 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagacattcaccaggaaaccactgcaaagtgcagtgcacgtacaattccttcgatcaagtggaagggcatttcatgggcttatagatcaactttgttccaaatgtcctaaacatgatgatggtgccactttgcaaagtgaaaccacttcaagcaagttcatgtgtttatacaagttcttcaggacatcaagtgaaggtgacactgcagctgtagacaatgtattgcgcaatgatggaaatacagaagttgtcgctatccagtcgaaagaaaatggtcgcaattctaataacatattggaggatggagagaagtcagttctgtcgtcggatcattctaaaaaattgagtgcacatcatcgactgaaaatctggattactagtggacacagtggcataatcggaagatacggaaagaagttggagctaaatgctgccaatgtgcctaagcagttcccaagtgaacatgtgaatactgtatggccagattggctcatgaaggtggcccctgaggcagtgcaaggctggttccctcgtcgtgcagaatcatttgagaaattaggcaagattggagaaggaacttatagtagtgtgtacaaagctcgagatcttaaaacaggcaagattgttgctctcaagaaggtgcggtttgtcaatttggatcctgaaagtgtgcgctttatggcaagagaaatacttgttcttcggaaactgaatcatccgaatgtcataaagttggaagggatcatagcatctcctgtttcaacaagtttgtatcttgtatttgaatacatggaacatgaccttactggtcttgctgcaactccaggcctcaagttcactgaaccacaggtaaagtgcttgatgcaacaattgcttagtggccttgatcactgccacagcaatggagttcttcatcgagacttgaagggttccaacctcttgattgacagcaatggtgtcttgaagattgcagactttggtctagcaacattttatgatcctaacaatcagcaaccactcacaagccgtgttgcaacattgtggtacaggccaccggaacttctgcttggtgccactaagtatggagtttctgtggatatgtggagtactgggtgcattctggcagaattgcttgctagcaagccaatcatgccaggaagaactgaggtagagcaaattcacaagatcttcaagctctgtggatcaccctctgatgagtactggcagaaactgaacgtgccccagacagggatgttcaagccctctcgccagtataggcggtgtattgcagataatttcaaacatttccctcagccagctatagttcttctagataatttgcttgcattagaaccagaagctcgtggaacagctgcctcgactctccagagtgactttttcagaagaaagccacttgcttgcagcccttcaagcttaccaaagtttccaccgagcaaagaatacgatgcaagactcaagctagaggaagctaggaggcaaagaaaggttggaggatctgttagacctggaagagagaacgttagaataaatcgtggtaatggctctatccaaccaaagaaacatacatatatcagtggaaatctccacccgcaaggtgatccacggacattagctacaagggtgcgatctcctggacttaacgccacatggaacaacaggggtgattcaatgacggtcgtgaagtacctggatgtaagtacaactctgtgcggatag</cdnaseq>

Protein Sequence

<aaseq>MKTFTRKPLQSAVHVQFLRSSGRAFHGLIDQLCSKCPKHDDGAT LQSETTSSKFMCLYKFFRTSSEGDTAAVDNVLRNDGNTEVVAIQSKENGRNSNNILED GEKSVLSSDHSKKLSAHHRLKIWITSGHSGIIGRYGKKLELNAANVPKQFPSEHVNTV WPDWLMKVAPEAVQGWFPRRAESFEKLGKIGEGTYSSVYKARDLKTGKIVALKKVRFV NLDPESVRFMAREILVLRKLNHPNVIKLEGIIASPVSTSLYLVFEYMEHDLTGLAATP GLKFTEPQVKCLMQQLLSGLDHCHSNGVLHRDLKGSNLLIDSNGVLKIADFGLATFYD PNNQQPLTSRVATLWYRPPELLLGATKYGVSVDMWSTGCILAELLASKPIMPGRTEVE QIHKIFKLCGSPSDEYWQKLNVPQTGMFKPSRQYRRCIADNFKHFPQPAIVLLDNLLA LEPEARGTAASTLQSDFFRRKPLACSPSSLPKFPPSKEYDARLKLEEARRQRKVGGSV RPGRENVRINRGNGSIQPKKHTYISGNLHPQGDPRTLATRVRSPGLNATWNNRGDSMT VVKYLDVSTTLCG</aaseq>

Gene Sequence

<dnaseqindica>794..1360#1485..1769#1848..2165#2253..2480#3303..3403#3493..3574#3871..4029#atattcatttctcatagttatccccgcctttctctcctccattggaggattagaacggagagagaggaaggtggggaaaattgttagatttgttcatccattatattttcttgaaaggaaaaggaaggcgaaggaattcaggtcttgataattgttcttgatgtgcatccccaaaagtacattcttttatcactagttgtcaaatgaattatagctttttccactattttgtgtaggatactgtttttgttggtgtctgttgtgctgtatcatttttccgagcagatctcacaccaaacatttttgtactgaaattgcttacaattattttgcttcaaaatttcaacggaaagattagtgtaaaatatcatgttttattgatgtcaagaaaaaaatttgcctcaattttcaagaaccttttagattcggaaatgcacagatatggttttgcatggttggtgggatggatggaaattgcattcaacctatggtcagttggtcacattttttttctgtagatctttttctttatagtttttctggaaccaacttctgtcactaatttttttctactttcatgtttatctaaataatgatgattgatgacaattgttttgctctaaaattttggggaaatgttcgtacaggtatttgcatcacatcacaatctgcaaagcaggaatacctgaaactctcatccagagttgacgaaatcatgtcaacttagaatgatatcaaggctcttgttacattcagaagatcagggcttcaggccctgcttgtttgttgctggatgaagacattcaccaggaaaccactgcaaagtgcagtgcacgtacaattccttcgatcaagtggaagggcatttcatgggcttatagatcaactttgttccaaatgtcctaaacatgatgatggtgccactttgcaaagtgaaaccacttcaagcaagttcatgtgtttatacaagttcttcaggacatcaagtgaaggtgacactgcagctgtagacaatgtattgcgcaatgatggaaatacagaagttgtcgctatccagtcgaaagaaaatggtcgcaattctaataacatattggaggatggagagaagtcagttctgtcgtcggatcattctaaaaaattgagtgcacatcatcgactgaaaatctggattactagtggacacagtggcataatcggaagatacggaaagaagttggagctaaatgctgccaatgtgcctaagcagttcccaagtgaacatgtgaatactgtatggccagattggctcatgaaggtggcccctgaggcagtgcaaggctggttccctcgtcgtgcagaatcatttgagaaattaggcaaggtgtgtagtcaagttgatgatacaatacaagttactcattggaaaattttgatatttgtgcttgttaatgctaatttctttaaccatccctaattactattgtatcacttcttttctatttcagattggagaaggaacttatagtagtgtgtacaaagctcgagatcttaaaacaggcaagattgttgctctcaagaaggtgcggtttgtcaatttggatcctgaaagtgtgcgctttatggcaagagaaatacttgttcttcggaaactgaatcatccgaatgtcataaagttggaagggatcatagcatctcctgtttcaacaagtttgtatcttgtatttgaatacatggaacatgaccttactggtcttgctgcaactccaggcctcaagttcactgaaccacaggtgattgtgatactagtttttcagttaaccacttggcagacaagaattttaactgttcccctttctcattaatttcaggtaaagtgcttgatgcaacaattgcttagtggccttgatcactgccacagcaatggagttcttcatcgagacttgaagggttccaacctcttgattgacagcaatggtgtcttgaagattgcagactttggtctagcaacattttatgatcctaacaatcagcaaccactcacaagccgtgttgcaacattgtggtacaggccaccggaacttctgcttggtgccactaagtatggagtttctgtggatatgtggagtactgggtgcattctggcagaattgcttgctagcaagccaatcatgccaggaagaactgaggtatacatacaactattagtctattacatttagtatagtaccttatgtcattttatatcatggtgttctccaacaatgcattcctaggtagagcaaattcacaagatcttcaagctctgtggatcaccctctgatgagtactggcagaaactgaacgtgccccagacagggatgttcaagccctctcgccagtataggcggtgtattgcagataatttcaaacatttccctcagccagctatagttcttctagataatttgcttgcattagaaccagaagctcgtggaacagctgcctcgactctccagagtgacgtaagttagtaccctcaaattgattattggttgcagtgcagtgttctgtaatttactacggtacaacacgaagtttttggctaccccaggaaagacttgtcctttttttatgaaaatattattgggggttaatcaaggcacatttcttgagttggaatttgtcatggcctaagaaatcagccttacgtggccttgctggcccagtacataaaggcagaacaaggcaggcatccaacaggtctacaacagattgattcctaactgttgtttagtttgttttggtcttaagccacttatatataagaattcgatttcattagcgagtggttttgaaggccggctgcataccttcacaaggtgtacagcatacacgcagccttcttcccggctgttttaacttgatctaatgatcattacaaaatgattttccatttttggaatacctaaaacgatgcatagatctagtcagaagtaacaaaatgatgtcaattgaaggcatattttctatattttaggttgaattctgtgtgtactggattgacaacttgttgtggaaaccagacatttttcaaagttgatttggtatctagcttgttagaggaaatattgtactgaccgcctagtaccagcaaactagtgcctgcaaaaatgctaaactggtccagaagtagttttccccagtatcatgccaatacaactcacatggttcaacaagttattatgtcttggtctaccgcgatttcattatatgtctggtttttcatagccttcttttaggagaacattgcatcgcagcacttaaccatgtatcacaaactttagtttttcagaagaaagccacttgcttgcagcccttcaagcttaccaaagtttccaccgagcaaagaatacgatgcaagactcaagctagaggaagctaggaggtatgtgtttcccaaccttttattcttcaaggaggatgtaattgagaagaactattagtggattctgaaattctgtcacgtttctgtaggcaaagaaaggttggaggatctgttagacctggaagagagaacgttagaataaatcgtggtaatggctctatccaaccaaaggtgagtacaaagatgtgctccttcttttcctaatttcctgtaaataacttttattccttcttaatacaaagatgcgctccttgcgtattcccaaaaaaaaaaaaaggtgagtacaagaaatttttcttgatgatcattgttatatgcagaaactttgataagatgtgctgctctccaattatacatgctcatgcttgatggaacatcttcatatatttgacgctactaatcatctcctatacattagctcaaaataagcactagaggttaactcaccaagctttatcatcgtgcagaaacatacatatatcagtggaaatctccacccgcaaggtgatccacggacattagctacaagggtgcgatctcctggacttaacgccacatggaacaacaggggtgattcaatgacggtcgtgaagtacctggatgtaagtacaactctgtgcggatagcatattccactatcttgacgacaaggagctcagacttgcttcaacctgaaccaactgatgtaatgaataagatgcatggttctcccaagaacgacctgggagagaagggccagactggggtaaggatggtacttctgcaaatgttaattcttttttaatataactttggttggtcaacaaaagcatcagtctggtcagatgaaaagcacataagaatatcagcttaaaggacatccctcatgtaaggtttagtgtcattgcctgtttgttagtgttgctactgatatatatgttgtaaggtattgttgcaagagtgttccacaagtgaacaaaacttatagtttacagaaattttaaataaaagatggactgaatgtctcaagagtcatagtacaatgatttgatattctactacaatctttacttgctgactgtgacatacagactataattttctgctgagagttgagatgttgtgtaatatgttgtacgggcatcaattcgtcgtctctgtatacatattgattttgattttatgtaacaaattaaattgataatttggctgttttgatttaaagaccaaaccatttatctcttaactaacagtagtcattttttttgttttgcttttatctctccagagctgtagggttaagaacagaacgcatcactctggttcactggttacaccagaaggaaacatagaggagatgctcaaggagcatgacaggaacatccaagcagccatgcgcaaagcacgccttaacaagaagaaatagttgtgacatttaggtgtgttcaagctaaagatcccaacttttccaagttccagttgaggaatggcagggctgcattcttgcacagagcacagagcttcttcaaaagggtaattgctttaaaacgtgatgaagtagctgaaaataacatgatcacttaaaagtgcagatatgttaaagtgtcaggtcatttgattgccgttttttctacagatcaagatcaaacctgaaatgtcgatacaatacgagagtttgggcatggacattatttcaaatgacaggttgtcctttgaacctgaaattcttgactgatggcagtgagagatccagatcatgccggagcaactaagaagaaatttcgacaacattgagtcatggataggtacatcttacagttacaaagtatgagcagcactgcggaagaggaggccaaacagagtgccagggatatccgaaagcgtagactggcctttattcttgcctgaattcttgtttcaccaagcttctgtggtctttccccttgttatggctgttctaacccatgccatctgcatctggtgttgctagacgggcttgtataaacttttcatcctcttatttctcttgtttttcttcttgcaagggtcttatataaactgtgcattctttgtccagttttttggctgtgtgcattctatgcagaggccgggggtggactcagttggaatgtatcatcttggtgtatttaactgagtcttaataaaacttccattatct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0242500, RefSeq:Os11g0242500