Difference between revisions of "Os11g0500100"

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(Created page with "{{JaponicaGene| GeneName = Os11g0500100| Description = Protein of unknown function DUF1544 domain containing protein| Version = NM_001074473.2 GI:297611873 GeneID:4350558| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0500100|
 
GeneName = Os11g0500100|

Revision as of 21:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0500100

Description

Protein of unknown function DUF1544 domain containing protein

Version

NM_001074473.2 GI:297611873 GeneID:4350558

Length

3793 bp

Definition

Oryza sativa Japonica Group Os11g0500100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19634376..19638168

Sequence Coding Region

19634376..19634613,19635580..19637265,19637489..19637607,19637699..19637775,19637910..19638168

Expression

GEO Profiles:Os11g0500100

Genome Context

<gbrowseImage1> name=NC_008404:19634376..19638168 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19634376..19638168 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtccgcgcgtgacttcgacggggacagcccagactcctggcttcgcctctctcctcgtcgtcggacgccaggaggcagtactgcagctggaggctggagcggatggcgaggacctcgccggtcttcacgcggagggactccacgtcgagggcatccaggcgggacaccaccgggttgaactggaagggcacgtcgaggcgctctgcttctttcatgagcgccatggccgtctgggtaatccgtccagtgctgcctctgtctcagtagaagctggaccaaaacaagctggtattaacttagatgatcctgcatgggctcactgtttctgcccagacataaccaagaaacatcacctacggtgcaagtattgtgacaaggtctgcactgctagaattacaagaattaagtaccatcttgctggaattaaaggtttcaatactactaagtgtcagaaagtttcaagtccagtgcagcaagagatgtttgatttgcttaccaagaagactagtgaaaaggaacagaaaaacaaagaaaaggaagtggccagagctgaagttgacatagaaaattcagattctgaaagtggcagtgaaggttcagatcatggcaataatgttcttgtggtgaagccaaaggagacaacaggatctagtagctctagatctgtagcaggtggtcatactattgacaagtactacaagcctccttctatagaagaatctgccagtatgacacaaagagtaattaagctaagcaataaggttcaaacagcattgacaactcagaaaagagaagagaggaggaatagaacttgtgagtacatatgtcagtggttctatgaagctagtattccacacaacacagtaacccttcctagctttgctcatatgttagaggccattagacaatttggtagaagtctgaaagggcctagtccctatgagatgagtggatcgttcttacagaaaaggaaggaaaaggtgatggatggattcaaggagcacaaggaatcatgggagctcacaggttgttctatcatgacagatgcatggacagataggaagggtaggggagtgatgaatttagttgtgcatagtgctcatggggtactcttcttagattcagtggaatgctcaggtgacaagaaagatggcaaatatatctttgaacttgtggacaggtacatagaagagataggggaacaacatgttgtccaagtggtgactgataatgctagcgtcaacacaactgcagcaagtctattgacagcaaaaagaccatcaatattttggaatggatgtgctgctcattgcttggatctcatgctcgaggatattgggaagcttggaccagttgaggaaaccattgctaatgcaagacaagtgactgttttcttgtatgctcatactagggtgttggatttgatgagaaagtttcttaacagagacttggttcgctctggggttacacgatttgccacagcttatttgaatctaaaaagcttgttagacaacaaaaaagagttagtaagactatttaaatcagatgagatggagcaattgggttacttgaagcgggccaaggggaagaaagccagcaaagtgatcagatctgaaaccttttggaaaaatgttgacattgcagttaattactttgagccattggctaacgtgttgagaagaatggacagcgatgtaccatcaatgggattcttccatggtttaatgcttgaggcgaagaaagaaatttctcagagattcgataatgataagagccgcttcatagaagtttgggatatcattgataaaagatgggacaacaagctcaagactcgactacacctggctgggtactatttgaacccctactactactacacaaataagcaagagatcgagagtgatggatcatttagagcagcaaaatggtggctgaaccatggcacaagcacaccaaatcttaggaagttggctgcaaggattttgagtttgacctgcagctcctcagcttgtgagaggaactggtcagtttttgaacagctttgtgttcactacttggcttataggttcatacaaagaagtgcaacaggctacttcatgaaaggatgtgagatctgtgaaatggatcaacaatgtgcaaaagagtcacagcagcacacaacaccacaagcaccagcaccagctaaaaggaaaaggcatatgcacactaagaagagaaaagtcagaagcctacagtctttgatgcgcaatgccccagtgcatcctgaagctccatcatccgactcagaagattgtgatgatggtattccaatgcagacttctgattctgataagtcaccctctccctctccctatgtctctgagaccgatgattga</cdnaseq>

Protein Sequence

<aaseq>MRPRVTSTGTAQTPGFASLLVVGRQEAVLQLEAGADGEDLAGLH AEGLHVEGIQAGHHRVELEGHVEALCFFHERHGRLGNPSSAASVSVEAGPKQAGINLD DPAWAHCFCPDITKKHHLRCKYCDKVCTARITRIKYHLAGIKGFNTTKCQKVSSPVQQ EMFDLLTKKTSEKEQKNKEKEVARAEVDIENSDSESGSEGSDHGNNVLVVKPKETTGS SSSRSVAGGHTIDKYYKPPSIEESASMTQRVIKLSNKVQTALTTQKREERRNRTCEYI CQWFYEASIPHNTVTLPSFAHMLEAIRQFGRSLKGPSPYEMSGSFLQKRKEKVMDGFK EHKESWELTGCSIMTDAWTDRKGRGVMNLVVHSAHGVLFLDSVECSGDKKDGKYIFEL VDRYIEEIGEQHVVQVVTDNASVNTTAASLLTAKRPSIFWNGCAAHCLDLMLEDIGKL GPVEETIANARQVTVFLYAHTRVLDLMRKFLNRDLVRSGVTRFATAYLNLKSLLDNKK ELVRLFKSDEMEQLGYLKRAKGKKASKVIRSETFWKNVDIAVNYFEPLANVLRRMDSD VPSMGFFHGLMLEAKKEISQRFDNDKSRFIEVWDIIDKRWDNKLKTRLHLAGYYLNPY YYYTNKQEIESDGSFRAAKWWLNHGTSTPNLRKLAARILSLTCSSSACERNWSVFEQL CVHYLAYRFIQRSATGYFMKGCEICEMDQQCAKESQQHTTPQAPAPAKRKRHMHTKKR KVRSLQSLMRNAPVHPEAPSSDSEDCDDGIPMQTSDSDKSPSPSPYVSETDD</aaseq>

Gene Sequence

<dnaseqindica>1..238#1205..2890#3114..3232#3324..3400#3535..3793#atgcgtccgcgcgtgacttcgacggggacagcccagactcctggcttcgcctctctcctcgtcgtcggacgccaggaggcagtactgcagctggaggctggagcggatggcgaggacctcgccggtcttcacgcggagggactccacgtcgagggcatccaggcgggacaccaccgggttgaactggaagggcacgtcgaggcgctctgcttctttcatgagcgccatggccgtctgggtgagcaaacagctcgggaaacaaaaatacaatccctggacatatatatttcctcaggcaacgggacaaaagcaaatcgccaccatttatttctgcgtacaagctcgcagctatgcacaaagttttaaatctccagctatagctgccgctatagccggagatagctgctgggaacggacggagctaagagatgcagtttttaacgctaagaatagcgggacgctaatagcgccatttagccggcaatagccgctaaactgaccgtaatttagcgtagctaaattgtaaaacgcggccggtctggcccaagaggaaaccggcccaactagaccagagtcgagaggtgggtaaagtgctgcaaaccctagctcgtaagctcccagcagcacactatccattccaacttcgaagcgctcactctccagctgcaagaaaagtggaggcggccggcggcggcggcgcagaggcgttcggcggcggcggtggcttcaagcggatcgaccaacgcaggcggctcgtggaggcgaccggcgccggctgctgcttcgagcgggcgtccaaccagcggcggcggctttgaaggcagctgagcagcagcgcaagtccgacgaggaggtccgtcagtgcaacgtctccgaagcactgaagcagcagcaccaaaggtgacggcatggcacaacaatccggtcagttctcacatcctcctctcttttttgcttgtatgttgcagatcttacaatatgtgaacaagttgtcaatatttgttacctctaatttcagatacttgccttatgatgtagatcttactatatgtgaattattttcttactccctgagatctctcgtttgcttgtttcgcctgtttaggaggtaatgataatacgtgctatatcagtttgcattattttgatgcttaggcagctttgacgctagcattaatgtgggctaagtttgctttttgtataggtaatccgtccagtgctgcctctgtctcagtagaagctggaccaaaacaagctggtattaacttagatgatcctgcatgggctcactgtttctgcccagacataaccaagaaacatcacctacggtgcaagtattgtgacaaggtctgcactgctagaattacaagaattaagtaccatcttgctggaattaaaggtttcaatactactaagtgtcagaaagtttcaagtccagtgcagcaagagatgtttgatttgcttaccaagaagactagtgaaaaggaacagaaaaacaaagaaaaggaagtggccagagctgaagttgacatagaaaattcagattctgaaagtggcagtgaaggttcagatcatggcaataatgttcttgtggtgaagccaaaggagacaacaggatctagtagctctagatctgtagcaggtggtcatactattgacaagtactacaagcctccttctatagaagaatctgccagtatgacacaaagagtaattaagctaagcaataaggttcaaacagcattgacaactcagaaaagagaagagaggaggaatagaacttgtgagtacatatgtcagtggttctatgaagctagtattccacacaacacagtaacccttcctagctttgctcatatgttagaggccattagacaatttggtagaagtctgaaagggcctagtccctatgagatgagtggatcgttcttacagaaaaggaaggaaaaggtgatggatggattcaaggagcacaaggaatcatgggagctcacaggttgttctatcatgacagatgcatggacagataggaagggtaggggagtgatgaatttagttgtgcatagtgctcatggggtactcttcttagattcagtggaatgctcaggtgacaagaaagatggcaaatatatctttgaacttgtggacaggtacatagaagagataggggaacaacatgttgtccaagtggtgactgataatgctagcgtcaacacaactgcagcaagtctattgacagcaaaaagaccatcaatattttggaatggatgtgctgctcattgcttggatctcatgctcgaggatattgggaagcttggaccagttgaggaaaccattgctaatgcaagacaagtgactgttttcttgtatgctcatactagggtgttggatttgatgagaaagtttcttaacagagacttggttcgctctggggttacacgatttgccacagcttatttgaatctaaaaagcttgttagacaacaaaaaagagttagtaagactatttaaatcagatgagatggagcaattgggttacttgaagcgggccaaggggaagaaagccagcaaagtgatcagatctgaaaccttttggaaaaatgttgacattgcagttaattactttgagccattggctaacgtgttgagaagaatggacagcgatgtaccatcaatgggattcttccatggtttaatgcttgaggcgaagaaagaaatttctcagagattcgataatgataagagccgcttcatagaagtttgggatatcattgataaaagatgggacaacaagctcaagactcgactacacctggctgggtactatttgaacccctactactactacacaaataagcaagagatcgagagtgatggatcatttagagcaggtgtgatttcctatattgacaagttggttgatgatgaagatatccaagacaaaataattgaagaactcaacttgtatcaagatcagcatgggagttttggacacgaaattgccgtaaggcagcgaaagaacaaaaatttcaatccaagttcagatctcaacatgtgaacttaattttattgctgaatatcatttttgttgtaatttgtgtaatgtttatgcagcaaaatggtggctgaaccatggcacaagcacaccaaatcttaggaagttggctgcaaggattttgagtttgacctgcagctcctcagcttgtgagaggaactggtcagtttttgaacaggtaaaaagaaatttgtgacctgtagctttatgtgcatgctgtctattttgaattataatgcttatttatggaatttagatctgacctgcagctttgtgttcactacttggcttataggttcatacaaagaagtgcaacaggctacttcatgaaaggatgtgagatctggtgtttgttaaatttaactccaagttaagaaataagagagagaacaagggtagagatcctatagagaaggaagtggatgatgttgtggcagatggtgacaatgaattcattactggtgttgtgccttcatgaagtgaaatggatcaacaatgtgcaaaagagtcacagcagcacacaacaccacaagcaccagcaccagctaaaaggaaaaggcatatgcacactaagaagagaaaagtcagaagcctacagtctttgatgcgcaatgccccagtgcatcctgaagctccatcatccgactcagaagattgtgatgatggtattccaatgcagacttctgattctgataagtcaccctctccctctccctatgtctctgagaccgatgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0500100, RefSeq:Os11g0500100