Difference between revisions of "Os11g0578100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0578100| Description = Heat shock protein DnaJ family protein| Version = NM_001074673.2 GI:297612074 GeneID:4350772| Length = 3159 bp| Def...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0578100|
 
GeneName = Os11g0578100|

Revision as of 21:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0578100

Description

Heat shock protein DnaJ family protein

Version

NM_001074673.2 GI:297612074 GeneID:4350772

Length

3159 bp

Definition

Oryza sativa Japonica Group Os11g0578100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23648639..23651797

Sequence Coding Region

23648639..23651797

Expression

GEO Profiles:Os11g0578100

Genome Context

<gbrowseImage1> name=NC_008404:23648639..23651797 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23648639..23651797 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcaaccgcgaagaggcctttagggccagggaaattgctttaagaaagatggaaaacaaagacttcaatggtgcccaaaagattgttcttaaagctcaaaagcttttcccagagcttgagaacatatcccagctgttaaatatctgtcatgtacattgtgcagcagaagcaacggtaaatggacagacggactggtatggaatccttcaagtggaggcgacagcagatgaggctaccataagaaagcaataccgcaagcttgccttttcacttcatcctgacaaaaatagtttcgctggcgctgaagctgctttcaagttggttgctgaagctcattcactattgtgtgatccaacaaaacgtcctatttatgacatcaaaaggaataatattcccagaaaggctccaaagcaagctacacggcccacaaagaaaactcaggcaaacaaatacagtgtacctgtatacttacatgcattttggacaatgtgcccacattgtcagatgcgatatcagtactacaacaatgccataaatactactgtctgttgtatgaactgcagaaggaatttttttgcatacaacctgcaagaacagcctgtgcctacaccaaatgtaccttatagttctcaatttccagcaaacatgtttccaaatcaacggcgtgatcccatcagtcgacagggccaccctgtgaagctttcttgcacaggtggaaacacagatgtgaggccggggacatatagctggccaggcagtgatgagagaactattcagtcagagatgacaagggggaaagatcaatttccagcaaggaatcaagataaatattctgtaccaacagcaaatgggaattcaggtggatgttcaataccagttcctgattgtccagacactattgacaggcaaaagttgggtagagaagatgcatctgttgcacctgctatgaatgtgcctggtcattcgaagcttcattcgacaggtggaggcacaaatgccaaaccacgggtaaatgtggcacaatggaaggaaaccacaaaagaggatagcagtgcaagtgttgaaaagaaagcaaaccagtcaatgatgaatcaaagaaaatcttctgcccaaactgcaaatgagaatgccagtggaagattcaagccagaccatgctgatccaaatgtttttgacagaaagaactttggtacagaagattcatttccagtgcccaattctgcagtaccctccagtctccggagatcagctaggagaaagcaagatgctggtgacaacggcagcatgaactccaaggtcagaaagaagcaaaagaagaataatgtgctatctgatgttgacttgaattgccagcaaatattcaacaataatggcactagtggtgacaaacaatctgctccacctcatgtgtcgagcacagtagacattcaagataaaacaaaagttacagatgcagatagtaagaccaaggcagaatctactgatactgctggttggaatgtgccttcctgctttgaaaaactatcattccctgatccagatttctatgattttgagaagctcagggatatcaatatgttcgcagttggtcagatatgggccctttatgatgaccttgatggcatgccaagattttatgctcgaattaaacattttgatgcatccaacttcaaagctcatctcacttggttggagtacaatgcagcaagtgaagaagagaagaaatggactgatgaagaactacctgttgcttgtggtaagttttgcttagggtcaacagaggtatcacatgacagactcatgttctctcacattgtttcatggacaaaaggcaaaaagaggaatgcctatgaagtatatcctaataagggtgaggtatgggcgctttataaggattggagcatgcagtggaattcagatgcagacagccatcggtcttatgagtatgaagttgttgaaatcttgtcagatttctcagttaatgatggtatcactgttgtcccattagtcaggattaaaggctttgtgagtttatttgcggcggctaaagacaaatccacaaatgtgatagtgtcgagtgagttgcttcgattttctcacagtatcccctcttataggacaaatggaaatgagaaagtaggttccccagcagggtttatagaacttgacactgcttgtctccccaatgacatggatataatatttccttctgtccccctggaatcttacatctcccttggcaagaaagaggacagtacgatcattgatttgaccaatgatagtacaagtagtagaatggatcctggaaatgagaaaaaggagaatctgcctgaagcacatatttgccgcccagtgtctacagaaaatcatgaaagtctttcttatgagaaaaacacatccttgcccaaaaatggccatgatgccaacggttttggcaattcttctgagccaagctgtccctccccaagtatttattcatatcctgattcagaattccataacttcgaggaaggccgcacatgtgagaagtttgaacctggacaaatttgggctttatacagtgatgctgataaatttcccaagttctatggttggataagcaaagtcgagctacaaccattcagagtacatttgatctggcttgaagcttgtcctgaacaggagcaggagaaacagtggttggatcaggacataccagtctgctgtggcaaatttaaaattcggacctggaaagcccaatatgagacaactgatactttctctcatttagtgcacacgggacagagggactcaacatggcagattgacattcttccacaagtaggcgaaatttggtgtatctacatgaactggacatctgactggactccttccagcatagatatgtgcgagttcgccatcggcgagatcattgagtgcacggaagcacttataaaagtttctctgctgacccaagttaatggctacagagcggtgtttaagcctgacaggcaaagtggagttctggagatacctaaaagagatcgtttgaagttttctcatcaaataccatccttccgtctgacagaagaaagaggtggcaagctccgtggcttctatgagcttgatccagcctctgttcctgacgttttcctctacagggacaccccatga</cdnaseq>

Protein Sequence

<aaseq>MECNREEAFRAREIALRKMENKDFNGAQKIVLKAQKLFPELENI SQLLNICHVHCAAEATVNGQTDWYGILQVEATADEATIRKQYRKLAFSLHPDKNSFAG AEAAFKLVAEAHSLLCDPTKRPIYDIKRNNIPRKAPKQATRPTKKTQANKYSVPVYLH AFWTMCPHCQMRYQYYNNAINTTVCCMNCRRNFFAYNLQEQPVPTPNVPYSSQFPANM FPNQRRDPISRQGHPVKLSCTGGNTDVRPGTYSWPGSDERTIQSEMTRGKDQFPARNQ DKYSVPTANGNSGGCSIPVPDCPDTIDRQKLGREDASVAPAMNVPGHSKLHSTGGGTN AKPRVNVAQWKETTKEDSSASVEKKANQSMMNQRKSSAQTANENASGRFKPDHADPNV FDRKNFGTEDSFPVPNSAVPSSLRRSARRKQDAGDNGSMNSKVRKKQKKNNVLSDVDL NCQQIFNNNGTSGDKQSAPPHVSSTVDIQDKTKVTDADSKTKAESTDTAGWNVPSCFE KLSFPDPDFYDFEKLRDINMFAVGQIWALYDDLDGMPRFYARIKHFDASNFKAHLTWL EYNAASEEEKKWTDEELPVACGKFCLGSTEVSHDRLMFSHIVSWTKGKKRNAYEVYPN KGEVWALYKDWSMQWNSDADSHRSYEYEVVEILSDFSVNDGITVVPLVRIKGFVSLFA AAKDKSTNVIVSSELLRFSHSIPSYRTNGNEKVGSPAGFIELDTACLPNDMDIIFPSV PLESYISLGKKEDSTIIDLTNDSTSSRMDPGNEKKENLPEAHICRPVSTENHESLSYE KNTSLPKNGHDANGFGNSSEPSCPSPSIYSYPDSEFHNFEEGRTCEKFEPGQIWALYS DADKFPKFYGWISKVELQPFRVHLIWLEACPEQEQEKQWLDQDIPVCCGKFKIRTWKA QYETTDTFSHLVHTGQRDSTWQIDILPQVGEIWCIYMNWTSDWTPSSIDMCEFAIGEI IECTEALIKVSLLTQVNGYRAVFKPDRQSGVLEIPKRDRLKFSHQIPSFRLTEERGGK LRGFYELDPASVPDVFLYRDTP</aaseq>

Gene Sequence

<dnaseqindica>1..3159#atggagtgcaaccgcgaagaggcctttagggccagggaaattgctttaagaaagatggaaaacaaagacttcaatggtgcccaaaagattgttcttaaagctcaaaagcttttcccagagcttgagaacatatcccagctgttaaatatctgtcatgtacattgtgcagcagaagcaacggtaaatggacagacggactggtatggaatccttcaagtggaggcgacagcagatgaggctaccataagaaagcaataccgcaagcttgccttttcacttcatcctgacaaaaatagtttcgctggcgctgaagctgctttcaagttggttgctgaagctcattcactattgtgtgatccaacaaaacgtcctatttatgacatcaaaaggaataatattcccagaaaggctccaaagcaagctacacggcccacaaagaaaactcaggcaaacaaatacagtgtacctgtatacttacatgcattttggacaatgtgcccacattgtcagatgcgatatcagtactacaacaatgccataaatactactgtctgttgtatgaactgcagaaggaatttttttgcatacaacctgcaagaacagcctgtgcctacaccaaatgtaccttatagttctcaatttccagcaaacatgtttccaaatcaacggcgtgatcccatcagtcgacagggccaccctgtgaagctttcttgcacaggtggaaacacagatgtgaggccggggacatatagctggccaggcagtgatgagagaactattcagtcagagatgacaagggggaaagatcaatttccagcaaggaatcaagataaatattctgtaccaacagcaaatgggaattcaggtggatgttcaataccagttcctgattgtccagacactattgacaggcaaaagttgggtagagaagatgcatctgttgcacctgctatgaatgtgcctggtcattcgaagcttcattcgacaggtggaggcacaaatgccaaaccacgggtaaatgtggcacaatggaaggaaaccacaaaagaggatagcagtgcaagtgttgaaaagaaagcaaaccagtcaatgatgaatcaaagaaaatcttctgcccaaactgcaaatgagaatgccagtggaagattcaagccagaccatgctgatccaaatgtttttgacagaaagaactttggtacagaagattcatttccagtgcccaattctgcagtaccctccagtctccggagatcagctaggagaaagcaagatgctggtgacaacggcagcatgaactccaaggtcagaaagaagcaaaagaagaataatgtgctatctgatgttgacttgaattgccagcaaatattcaacaataatggcactagtggtgacaaacaatctgctccacctcatgtgtcgagcacagtagacattcaagataaaacaaaagttacagatgcagatagtaagaccaaggcagaatctactgatactgctggttggaatgtgccttcctgctttgaaaaactatcattccctgatccagatttctatgattttgagaagctcagggatatcaatatgttcgcagttggtcagatatgggccctttatgatgaccttgatggcatgccaagattttatgctcgaattaaacattttgatgcatccaacttcaaagctcatctcacttggttggagtacaatgcagcaagtgaagaagagaagaaatggactgatgaagaactacctgttgcttgtggtaagttttgcttagggtcaacagaggtatcacatgacagactcatgttctctcacattgtttcatggacaaaaggcaaaaagaggaatgcctatgaagtatatcctaataagggtgaggtatgggcgctttataaggattggagcatgcagtggaattcagatgcagacagccatcggtcttatgagtatgaagttgttgaaatcttgtcagatttctcagttaatgatggtatcactgttgtcccattagtcaggattaaaggctttgtgagtttatttgcggcggctaaagacaaatccacaaatgtgatagtgtcgagtgagttgcttcgattttctcacagtatcccctcttataggacaaatggaaatgagaaagtaggttccccagcagggtttatagaacttgacactgcttgtctccccaatgacatggatataatatttccttctgtccccctggaatcttacatctcccttggcaagaaagaggacagtacgatcattgatttgaccaatgatagtacaagtagtagaatggatcctggaaatgagaaaaaggagaatctgcctgaagcacatatttgccgcccagtgtctacagaaaatcatgaaagtctttcttatgagaaaaacacatccttgcccaaaaatggccatgatgccaacggttttggcaattcttctgagccaagctgtccctccccaagtatttattcatatcctgattcagaattccataacttcgaggaaggccgcacatgtgagaagtttgaacctggacaaatttgggctttatacagtgatgctgataaatttcccaagttctatggttggataagcaaagtcgagctacaaccattcagagtacatttgatctggcttgaagcttgtcctgaacaggagcaggagaaacagtggttggatcaggacataccagtctgctgtggcaaatttaaaattcggacctggaaagcccaatatgagacaactgatactttctctcatttagtgcacacgggacagagggactcaacatggcagattgacattcttccacaagtaggcgaaatttggtgtatctacatgaactggacatctgactggactccttccagcatagatatgtgcgagttcgccatcggcgagatcattgagtgcacggaagcacttataaaagtttctctgctgacccaagttaatggctacagagcggtgtttaagcctgacaggcaaagtggagttctggagatacctaaaagagatcgtttgaagttttctcatcaaataccatccttccgtctgacagaagaaagaggtggcaagctccgtggcttctatgagcttgatccagcctctgttcctgacgttttcctctacagggacaccccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0578100, RefSeq:Os11g0578100