Difference between revisions of "BGIOSGA000072"
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[[Category:Indica Chromosome 1]] | [[Category:Indica Chromosome 1]] | ||
[[Category:Chromosome 1]] | [[Category:Chromosome 1]] | ||
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Revision as of 10:45, 27 October 2012
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
BGIOSGA000072 |
|---|---|
| Description |
Putative uncharacterized protein |
| Definition |
Oryza sativa Indica Group BGIOSGA000072, complete gene. |
| LocusTag |
OsI_05295 |
| Ensembl Transcript ID |
BGIOSGA000072-TA |
| Ensembl Protein ID |
BGIOSGA000072-PA |
| Length |
3570 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:46409419..46412988 |
| Sequence Coding Region |
46412811..46412988,46412560..46412699,46411966..46412057,46411705..46411818,46411089..46411231 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:46409419..46412988 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:46409419..46412988 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGATGCAAACAAAACTGGAGCTGCCCAGGAAGCTATAAATGGTATTCGAAGGGCCAGCAAGGCCATGACTGAGCAAGAAGCCCGGCAAATACTAGGTATCAGCGAAAAGTCGACTTGGGAAGAGATCGTCCAGAAATACGATACTATGTTTGAGAGGAATGCTAAGAATGGGAGCTTCTATCTCCAGTCGAAAGTTCATCGGGCTAAAGAATGTCTAGAAGCTGTATATCAAAAGCCCGACGTACCTAGCTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MLLRLRPPPQPAASLASFLPFSPFRRFLHSPSWRPPPPPPPRRRRLLSTAVASSSSSSKGSTSLEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIREAMATEVMIGQNDNVEGVRTFFGMDFYAPSVVLTTGTFMSDANKTGAAQEAINGIRRASKAMTEQEARQILGISEKSTWEEIVQKYDTMFERNAKNGSFYLQSKVHRAKECLEAVYQKPDVPS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..178#290..429#932..1023#1171..1284#1758..1900#3177..3307#3451..3570#ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGTAACGCTGCTCACCTCGTAGTGGTCGATGGGGATCTGAGTATTTGCGACCACATGAAACAAGCGAAAACGATTCTAATTGATGGATGGGTTTCTGCTATTCTGGCATTAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGGTCTAACACTGAGCTCCATTGCAATTTTTCACTTACTAGATTTCTTCATTTGTGTACTACCATATCCTTCCATTAGACCAAATTGTACTTTCTTTATGATTCCTGTATCTTGGTTACAAAAGCAAAGTTAGGTAGTAAAAGATCATATGCTAAAAATATGTGGTCATTGATTCCTTGTGGCATAGTTAGTTAAAATCTGCAATCATATACCCCATACAACATGAAGCAAGCAATTGAACCATGTTTCATAAGACTTGTATAAGTGCATGTCAAATCCACGGATTTTTCTTAGAAAATATGATATGGCATGTATAGTGGATGAAATGCTTACATACATACATTTTTGGAACTCATAGTACAAGGATAGTTTCCAACGTGGTATGTCCTCAGTCTAGGCTATAAGGATCTTAGCAAATCAACCTTTTTAACAAAGGGAACATTATGTTACTATTGTAATATGGCTACCTGTCCTAACTCTTCTTTTATTCCTTATGTTGCATAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTACATTTAATTGGTTCATTATTTTAGATAGATAGATTTTCTTTTCCCCTACTTTTTGGACTTTTAGTTGGTGTGTAGGTCTGAGAGATGAAACCTGCACCGAAATCCTCAAAGATCTATTGTCATACTGATTACTTCATCTCTTAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGGTCAATATGCACTCTCGTCTTTTATCAGAATTTACAAACTATATTCGAATTTGTTTGCCTTTTAGGTAAATCAAAAGACACCAAACTACTCCCTCCTGATTTCTGAATAAGAGCGAGCGTGCTGTGTAAATTCTGAATTGGCTGGAGTTATTCACGCGTTTCAGATATTCTTAAGTTGTACATGGTTATCCACAGAGTCACAAGGCTTGTGTTTTATTAGTTTAACCTATGAAGACAACTTCATTCATTTGACATGTGTTTTGATTGGTCCTGACCAAAGACTATTGACTAGATGTTAATTCTAATTTCTTGAGTAGAGGTGAATCTGTTTCTGCATATCTTTTACCTATAAATTCAACAAATATAGTTGATGTGTTCTTGTGATATCTAGAAATATGTTGTTGTTGAATGCAGGTACTTTAGTGTAATATCTTTCATGTTATTTACTGATTATTGCATATGCTATTTTTCAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTATGGAACATCTGACAATATGTATGAGTGAAGTTTTTTGTTATTCGTTATATACAAGTGTCATCTTCCACTTGTATCTGAAAATGCAAATTCCGTCATTCTTATATACTTTTGCTTCTCTCTTTCATTTGCCACTTTACATTTCATTGTTAAAGCAACGCCTTTTGTACTCTTATTAGTAAGATCTAGAAGCACTGTGCTTCTGTTGTGACAGTTAATTTGGTTTCTCTCTGATTAGAAGTCAAAATTTCAAAAGCACCCCTTGAATACAGTGTTCGTTTTATGTAATGATTGATCAAAGTTGTGAACCCTTGTGGATAATTGATTCTTTTGCTATCGATCTGGCACAGAAAATAGATTGAATGGACTTTGCACATTTGAACCTTCTTGTTCAAATATTTCCAAATGTATGTGGTATTTTCTCCGATAGACTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATTTAAATAACATTTGATAAAATCAAAATGATGCCTTCAACTTGATTCAGCTTTTGCATCATGGTTCTTTAGTAGTTCAGTTCACATCCTTGTTATGCCTATGTGGATCATACAACAATTTTAGGCTGTGCTTGTAACCTGTAACTTTTGATGATTCTCGATCATGACTGAGTTAATGGGATATTGCATATACTGTTCCAAATAGTTTGCTTGAAGATTAGCAGACTGTTGATTGCATATGATTGTGAACTGTCTGATAATTTTCCAGTACAGATATTGTTGAACATAGCTTTTTCCTGCCATAACCTTCTACCAATATTCATGCTAAAACATCTAATTCTTTTATTATTATCTAAAGCGACATCTGTGAATTTGTGACTGCATTGCTAAATGTTCCATGGCACACATTTTTTTCTGAAAGGCAATCAATGATTTTGCGGTCCATTCTAAATGTTGCTCAACATAGCTTAAGTAGCCTACTTTATATGCTTCCAATTTATATGGAAGCATTTGCTTCCTTTGCATCTCTTTTGACTATACCATCCATGCCACGCATTCCCTAATGAAATTAATAATAAATTCTACCTTTGTCCTGTAGATGCAAACAAAACTGGAGCTGCCCAGGAAGCTATAAATGGTATTCGAAGGGCCAGCAAGGCCATGACTGAGCAAGAAGCCCGGCAAATACTAGGTATCAGCGAAAAGTCGACTTGGGAAGAGATCGTCCAGGTTTGTGACAATGTGCTTTCATTAACTTGATACGTTCCAGCAAATCAATTTTCTACCAATTAAGACTGTTAAAAGCACATGGCAGTCATTTGCTCTAGCCAGAAACTAGCATTGAATTTCTATCTTGTTGAAATACTTTGCAGAAATACGATACTATGTTTGAGAGGAATGCTAAGAATGGGAGCTTCTATCTCCAGTCGAAAGTTCATCGGGCTAAAGAATGTCTAGAAGCTGTATATCAAAAGCCCGACGTACCTAGCTGA</dnaseqindica> |
| External Link(s) |
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