Difference between revisions of "NAC"

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(Created page with "==Brief Introduction== * The NAC gene family members are plant-specific transcriptional factors (TFs) derived from the names of NAM (no apical meristem, Petunia), ATAF1–2, a...")
 
(→‎Brief Introduction)
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*'''Pfam: [http://pfam.janelia.org/family/PF02365 PF02365]'''    <font color=green>'''||'''</font>      '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR003441 IPR003441]''' <font color=green>'''||'''</font>
 
*'''Pfam: [http://pfam.janelia.org/family/PF02365 PF02365]'''    <font color=green>'''||'''</font>      '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR003441 IPR003441]''' <font color=green>'''||'''</font>
 +
==''Japonica'' Group==
 +
{| style="background:#A1A3A6; width:85%;" border="0"
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|-style="background:white; color:black" align="center"
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!
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'''[[Os03g0119966]]'''
 +
||
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'''[[Os04g0536500]]'''
 +
||     
 +
'''[[Os07g0684800]]'''
 +
|| 
 +
'''[[Os09g0497900]]'''
 +
||
 +
'''[[Os03g0624600]]'''                           
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|-style="background:white; color:black" align="center"
 +
!
 +
'''[[Os01g0393100]]'''
 +
||
 +
'''[[Os03g0327100]]''' 
 +
||
 +
'''[[Os01g0104500]]''' 
 +
||
 +
'''[[Os04g0460600]]'''
 +
||
 +
'''[[Os06g0344900]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os03g0127200]]'''
 +
||
 +
'''[[Os06g0104200]]'''
 +
||
 +
'''[[Os09g0552900]]'''
 +
||
 +
'''[[Os07g0566500]]'''
 +
||
 +
'''[[Os03g0327800]]'''
 +
|-style="background:white; color:black" align="center"
 +
!
 +
'''[[Os10g0532000]]'''
 +
||
 +
'''[[Os02g0579000]]'''
 +
||
 +
'''[[Os06g0131700]]'''
 +
||
 +
'''[[Os01g0816100]]'''
 +
||
 +
'''[[Os08g0562200]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os11g0126900]]'''
 +
||
 +
'''[[Os12g0123700]]'''
 +
||
 +
'''[[Os06g0530400]]'''
 +
||
 +
'''[[Os08g0511200]]'''
 +
||
 +
'''[[Os08g0115800]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os12g0610600]]'''
 +
||
 +
'''[[Os08g0103900]]'''
 +
||
 +
'''[[Os12g0123800]]'''
 +
||
 +
'''[[Os08g0436700]]'''
 +
||
 +
'''[[Os08g0157900]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os03g0815100]]'''
 +
||
 +
'''[[Os02g0252200]]'''
 +
||
 +
'''[[Os07g0225300]]'''
 +
||
 +
'''[[Os01g0884300]]'''
 +
||
 +
'''[[Os11g0127600]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os04g0515900]]'''
 +
||
 +
'''[[Os01g0261200]]'''
 +
||
 +
'''[[Os03g0777000]]'''
 +
||
 +
'''[[Os06g0675600]]'''
 +
||
 +
'''[[Os11g0184900]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os03g0109000]]'''
 +
||
 +
'''[[Os01g0104200]]'''
 +
||
 +
'''[[Os10g0477600]]'''
 +
||
 +
'''[[Os01g0888300]]'''
 +
||
 +
'''[[Os08g0200600]]'''
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|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os02g0822400]]'''
 +
||
 +
'''[[Os04g0619000]]'''
 +
||
 +
'''[[Os02g0810900]]'''
 +
||
 +
'''[[Os08g0113500]]'''
 +
||
 +
'''[[Os05g0418800]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
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'''[[Os05g0426200]]'''
 +
||
 +
'''[[Os03g0133000]]'''
 +
||
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'''[[Os06g0101800]]'''
 +
||
 +
'''[[Os11g0127000]]'''
 +
||
 +
'''[[Os08g0433500]]'''
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|-style="background:white; color:black" align="center"
 +
! 
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'''[[Os06g0726300]]'''
 +
||
 +
'''[[Os05g0415400]]'''
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||
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'''[[Os09g0493700]]'''
 +
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 +
'''[[Os12g0477400]]'''
 +
||
 +
'''[[Os05g0442700]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
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'''[[Os01g0862800]]'''
 +
||
 +
'''[[Os11g0154500]]'''
 +
||
 +
'''[[Os12g0156100]]'''
 +
||
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'''[[Os11g0512000]]'''
 +
||
 +
'''[[Os02g0214500]]'''
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|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os09g0509100]]'''
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||
 +
'''[[Os01g0191300]]'''
 +
||
 +
'''[[Os05g0563000]]'''
 +
||
 +
'''[[Os01g0925400]]'''
 +
||
 +
'''[[Os02g0555300]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os02g0594800]]'''
 +
||
 +
'''[[Os04g0437000]]'''
 +
||
 +
'''[[Os08g0535800]]'''
 +
||
 +
'''[[Os10g0571600]]'''
 +
||
 +
'''[[Os11g0512200]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os10g0402100]]'''
 +
||
 +
'''[[Os10g0414000]]'''
 +
||
 +
'''[[Os07g0272700]]'''
 +
||
 +
'''[[Os07g0456900]]'''
 +
||
 +
'''[[Os10g0413700]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os01g0675800]]'''
 +
||
 +
'''[[Os09g0295000]]'''
 +
||
 +
'''[[Os02g0745300]]'''
 +
||
 +
'''[[Os01g0946200]]'''
 +
||
 +
'''[[Os07g0683200]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
 +
'''[[Os09g0411900]]'''
 +
||
 +
'''[[Os04g0508400]]'''
 +
||
 +
'''[[Os02g0285900]]'''
 +
||
 +
'''[[Os04g0477300]]'''
 +
||
 +
'''[[Os10g0413900]]'''
 +
|-style="background:white; color:black" align="center"
 +
! 
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'''[[Os10g0359500]]'''
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||
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||
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||
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||
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|}

Revision as of 14:38, 14 July 2013

Brief Introduction

  • The NAC gene family members are plant-specific transcriptional factors (TFs) derived from the names of NAM (no apical meristem, Petunia), ATAF1–2, and CUC2 (cup-shaped cotyledon, Arabidopsis), with a conserved NAM domain in the N-terminus[1][2][3]. The C-terminal domain of NAC proteins is highly variable which was reported to act as a transcriptional activator or repressor[1].

Figure 1. Gene structure of BGIOSGA016756
  • The NAC transcription factors are one of the key regulatory gene families involved in plant growth and defense. They have been reported to participate in many biogical processes, for example, maintenance of the shoot apical meristem, cotyledon development, lateral root development, flower formation, hormone signaling response to pathogen infection, plant organ senescence, embryo development, formation of secondary walls, cell division, fiber development, seed development and shoot branching determination.[1][2][3][4].

Japonica Group

Os03g0119966

Os04g0536500

Os07g0684800

Os09g0497900

Os03g0624600

Os01g0393100

Os03g0327100

Os01g0104500

Os04g0460600

Os06g0344900

Os03g0127200

Os06g0104200

Os09g0552900

Os07g0566500

Os03g0327800

Os10g0532000

Os02g0579000

Os06g0131700

Os01g0816100

Os08g0562200

Os11g0126900

Os12g0123700

Os06g0530400

Os08g0511200

Os08g0115800

Os12g0610600

Os08g0103900

Os12g0123800

Os08g0436700

Os08g0157900

Os03g0815100

Os02g0252200

Os07g0225300

Os01g0884300

Os11g0127600

Os04g0515900

Os01g0261200

Os03g0777000

Os06g0675600

Os11g0184900

Os03g0109000

Os01g0104200

Os10g0477600

Os01g0888300

Os08g0200600

Os02g0822400

Os04g0619000

Os02g0810900

Os08g0113500

Os05g0418800

Os05g0426200

Os03g0133000

Os06g0101800

Os11g0127000

Os08g0433500

Os06g0726300

Os05g0415400

Os09g0493700

Os12g0477400

Os05g0442700

Os01g0862800

Os11g0154500

Os12g0156100

Os11g0512000

Os02g0214500

Os09g0509100

Os01g0191300

Os05g0563000

Os01g0925400

Os02g0555300

Os02g0594800

Os04g0437000

Os08g0535800

Os10g0571600

Os11g0512200

Os10g0402100

Os10g0414000

Os07g0272700

Os07g0456900

Os10g0413700

Os01g0675800

Os09g0295000

Os02g0745300

Os01g0946200

Os07g0683200

Os09g0411900

Os04g0508400

Os02g0285900

Os04g0477300

Os10g0413900

Os10g0359500

  1. ↑ 1.0 1.1 1.2 Cite error: Invalid <ref> tag; no text was provided for refs named ref1
  2. ↑ 2.0 2.1 Cite error: Invalid <ref> tag; no text was provided for refs named ref2
  3. ↑ 3.0 3.1 Cite error: Invalid <ref> tag; no text was provided for refs named ref3
  4. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named ref4
Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=NAC&oldid=167134"