Difference between revisions of "Os07g0102300"
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| − | + | SEMI-ROLLED LEAF 1 (SRL1), a gene involved in the regulation of leaf rolling. | |
==Annotated Information== | ==Annotated Information== | ||
Revision as of 03:07, 26 August 2013
SEMI-ROLLED LEAF 1 (SRL1), a gene involved in the regulation of leaf rolling.
Contents
Annotated Information
Function
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Expression
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Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os07g0102300 |
|---|---|
| Description |
Conserved hypothetical protein |
| Version |
NM_001065217.1 GI:115470166 GeneID:4342175 |
| Length |
9406 bp |
| Definition |
Oryza sativa Japonica Group Os07g0102300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:133173..142578 |
| Sequence Coding Region |
133549..133628,133780..133824,134513..134656,139932..139943,140098..140343 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:133173..142578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:133173..142578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggatggcccccgccggtcgcctcctcctcatctcctgcctcctctgtgtgcccaattcatttggatttgcatttgctgtggaggaggaggaggacggcagcgggctgatgccacagctctcacccaccggctctcccaaccccttggttcccttcctcgcgcccgcccctctcgcgccattcttcaacaccacccctcctaacttgtcaggcaagtgctcattgaattttactgctgtcggtgacctcatcaccaccactgctgtcgactgctttgcgtccttcgccccgttcctcgccaatgtcatctgctgcccccagctccaggccatgctcaccatcctcattgggcagtccagcaagcagactggctcccttgctttggatcccaccgtcgctacctactgcctctccgatgttcagcagctattgttgagccagggcgctagtgatgagctccacaacatttgctcccttcacctctccaatgtcaccgagggatcatgccccgttagcaccgtcgatgcctttgaagctgtcatcgactcctcaaagctcctcgaggcctgtcacaagattgatcctgtcaacgagtgctgcagccgcacctgccagaatgctatcaacgatgcctcccagaagatctctttcaaagacggcggtttgacaagctacgctggtagccccaaagttgatagctgcaggaatgtcgtgctcagatggctatccagtaggcttggcccatcatctgcaaagcaaatgctcaggcagatatctaactgcaatgtcaatggagtttgtccactaagctttccagacacgagtaaagtggcaaaagagtgcagtggaactgtcaagaatggtacttcatgttgcaaggctatggacagttatgtatctcacttgcaaaagcaaagcttcataacaaatttgcaagctttagattgtgcccaattccttggtgacaagttgcaaaagatgaatgtcagtatgaatgtttatagctcatgtcagataactctcaaggacttttctcttcaagttggatctcaagaatctggatgccttcttccaagtatgccctcggatgcatcttttgacccagctactgggattagtttcacatgcgatctgaatgataatattgctgccccatggccatcttctatgcaagcatcgtcttcttcatgcaataaatctgttaatattccagagagacctgctgcgacatcggcacaaaatggtgtcaaccagaacagactggagcttagcctacttatttatctgggcacccttgttgttgctatttggctacaagtctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPT GSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTAVGDLITTTAVDCFASFAPFLAN VICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISF KDGGLTSYAGSPKVDSCRNVVLRWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTS KVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQFLGDKLQKMNVSMNV YSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQ ASSSSCNKSVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV</aaseq> |
| Gene Sequence |
<dnaseqindica>8951..9030#8755..8799#7923..8066#2636..2647#2236..2481#671..1255#381..545#167..215#aggttttgctgctgtccgcctgcctgcctactttctccacttttttctcctcctcctcctcttcttcttccttcgtttcgcctcctctactcttctaagttccaacttccaactagctcgactcaagtgaagagtccgccgcctttccctcctcgccgccgctcggatggggatggcccccgccggtcgcctcctcctcatctcctgcctcctctgtcagtagtttgcctcttgatccctcctctgtttcctttcctttccagtttcccatgcatttcttctctgtttcaccaaatctaattgggttgtttcttgattttgatctgtatgtgtgtggccactgctctgaatccgttaattaaataaatataaatgcgcaggtgtgcccaattcatttggatttgcatttgctgtggaggaggaggaggacggcagcgggctgatgccacagctctcacccaccggctctcccaaccccttggttcccttcctcgcgcccgcccctctcgcgccattcttcaacaccacccctcctaacttgtcaggtacccttaattacctctcctccttcgatcttcttacacttctcttataggagtataatatataggagtattaattaattaagagtacaaataagtaattgccaatgtaattttggtggatgcaggcaagtgctcattgaattttactgctgtcggtgacctcatcaccaccactgctgtcgactgctttgcgtccttcgccccgttcctcgccaatgtcatctgctgcccccagctccaggccatgctcaccatcctcattgggcagtccagcaagcagactggctcccttgctttggatcccaccgtcgctacctactgcctctccgatgttcagcagctattgttgagccagggcgctagtgatgagctccacaacatttgctcccttcacctctccaatgtcaccgagggatcatgccccgttagcaccgtcgatgcctttgaagctgtcatcgactcctcaaagctcctcgaggcctgtcacaagattgatcctgtcaacgagtgctgcagccgcacctgccagaatgctatcaacgatgcctcccagaagatctctttcaaagacggcggtttgacaagctacgctggtagccccaaagttgatagctgcaggaatgtcgtgctcagatggctatccagtaggcttggcccatcatctgcaaagcaaatgctcaggcagatatctaactgcaatgtcaatggaggtaccccctcaaactagcaacttcaatctactaccggcctttacaatgccatcagccagtatgttatgttctttacaatagaccacacaccctgctcctgatctatattgcttagcatttatttagcttagttattatttagtccctctataaatcaaactgttagaagtgcaccagtctgttctcacatcttgccctgtgtagtttgcaactgtattcatgtaaacttgctttcacgtgtcactatatagcactatcccctgcaagttagattgatttagttgagtttatataggctatagggaatcaatgttggtatgtaagtatcaaactgatagaaagaccattgattcagacaagcaccaaagagggaaaaattagttcaagttgatggacgcataagaataaaatagctcactcttactgtcttacatgaccataaaggtatgcaagtgctgcagacagatcctttggatttaagggcggcagttgattttcttccaaagagaacaccgtaatttaaagcaaagcactaaacaatccatacatgatatatctacatctaagcatagtctcttgtgtccatgtgggtctttcggaacactttgctgccattggaagttgactgcatggaactcaataggagccttagttctttacttcaagtatctaggtcagtgctatcataatatgctaggttctgaaaacatgtgggccgttgccacttatattaggtctgatggatctcagatgtatgaactggatggaaataataagaatctttagtacactagaactgtcatgtatgtacattgaacaagttacagaaattttctgtacctagtctttatgacaaattgtatttttcttttttttatcaccatcattttaacataagcaattatgtcttaagttttgttctcactgttcagtgcttgtgttctttatgctgagaaattgtttgcgtttcaactctccagtttgtccactaagctttccagacacgagtaaagtggcaaaagagtgcagtggaactgtcaagaatggtacttcatgttgcaaggctatggacagttatgtatctcacttgcaaaagcaaagcttcataacaaatttgcaagctttagattgtgcccaattccttggtgacaagttgcaaaagatgaatgtcagtatgaatgtttatagctcatgtcagataactctcaaggacttttctcttcaaggtaagttagaaaagaacattcagttgtttgtgcattaagatcatattttaaatgtcatttgtgtatttcttggaaactgaattgatggagtttctttccgtcgttcaacttacgtgtttgaccgattggaccaccctgctgatttgacaaacagttggatctcaaggtatgtgaacattttcaattatttttaccggtcatataacagtttatattaacgagagtatgtgcatcttcagttcttctgtttgactagcctagcattggtagaaaaatttttggaaatatacttgtttttgactggaattgcaagaataggctgattaggggaagttttgcggaaatatactggtgtcgcgccttgaatgagcgagagagcgatatcacgtaaaccatgcgcgaaagcggcggcgctatcgctaattgagagagagagagagagaggggtaatgcgtcggtctcgcattcggaaagcgcgagaacgaagcggtatcgcacttttgtaaatcgaaagcgtgggccgtccgacgccgcctgacgtacgcgggccacgaagcggtctcgagctttgagtgcgcgataacgcgtgcggtatcgctgtcggctcgcgcgagaccgtagtggcgggggccgtctgacgcacgtgaggcccggagcagtctcgcgctatgcgccagcgagagcgcggtcggtctcgcgctttgcgcgaacgagagcgccagcggtatcgcggtcggctagcgcgataccgttgcggcgtggcccacccccctaatcggctgataatcccgtaggtggcgacagcaacggcttcggtcaatatcgcgcttcgggagcgcgagagcggtcagctaattgcgcatgcaaatcaggtgcaagtcgttaatatttcatgagccgttgctatgtagaaagtataattttttttcatatttttttattatgtgtgcaacatatatacataaatgaacatgagaatatgtatatattgaaaataggcaaagattgtgtacgcggctatgagaagaaaaataaatatcttggaatttgcaaaataatgatatcagttacagatacatataggaaagaaacaatatattacctatagaaaaatagaaattgaatatatatttattaaaaatatataaaggagtagagagatcattcaagagcaatttttacaaagttaacaaagaatatgaatttagaatatgtcatattcacagagaaaatcacatttgcatattcatagactcggatcttatgacaagaaccgtgtagcgagttaacgaactacctagttcttgccacaagatcgggcctaagaatatgcaacaccgagtttatgaatttgcagtagtaggtcatattcacaaaaggacgctggaacttgaaaaaaagagtgggtgtaagaatgtattaaaaaaatcacatttgtatattcatagactcgatcttagggcaggaaccgtgtagcgagtgaacgaacaagatagagcgagttcaccaactactcagtttttgcctcaagattgggcctaagaatatgcaacacgaagttggaaccagcagaacgtttatggagaagagatgtagttgtgtgctaggtttggttatttataggggatgggaagaagctgcgcgtagtctcaattattagaaagagatgacgacgcgtcggactgcttcactaatcaatccaataattacaaagagaggacgcactttcggcgcatcagactgtttcactcgtgaagttactaattacaaagggacacaggtttcttcagtcatgccatgcctatcgagaaaagtgattggacactgtcactttcggcggcacatgctgcttcttgttttctttagttattacaaagcgacgacggcactttcggcgcggcggaatcttcactgttaaatgtgaatgattgattctctgtgaaatgtcccgtgattggaaagagaggatgccattttaggtgcgtatgattgtatctctgtgaaaagaaattagtgtgtaatgtaagtcatagtagtaaaaaataaaagtaatatccaatttgaatcgcacgagtaacatcgaaactgcactattaatttaattagtgagactataatttgtgttagctgtcatacgaaaaattattagttaaccaaaaatcatgtgttaactgcctgcaaaatagggcgtaaaaatatgatatatttcggaactacgaaacattgtacataacatgaagaataaccagtacaaagaaataatgttcactgctagtaatagaaagccaaaagcataacaaggtccagttaggtttgccagcgaacttaaagacataatgttcacttctactcgtcatcattgttagtcatagtcctagatgttccagctcgcttttttgtagtctttttccttgctcctgcggcatgtcgagggcctgagattgacagacggtttagctcatggcgctcacggttagatcgacgcgggtcattgttgtttccttctaaatcgccaacctctggttgtgtgggctgtcacctgggcgcatcaacaatttgcgaagcccaaagctcattgggtaccgatgacgaccctccaccgaagctagacatgtcgccgtacgatgccgtgtaaggcatctgactgcttgcacccgaggatccagacgagcgaggactacccactattgagtaaatatatgatatgcagctagcacccttgactcacttgacggtactactcgcattgaaatattttgttgcatcggtttgtcgttatacatgggcttgcactttcttacattgttgctaccttccatgcagaccgatattgcaggggagttagtaagggatgcgaaaactttgtgggagaagcttagagatggtatcgcgggtactaaccaggaagttatagccgcggttgactccctccgtagaaaaggtaagcgaatcatgcggctcgcatcgtgccgacattcctcggacgtctatactctggcaacatcaaggacgttcgagccaatgccggagcgtccctctacctcttcccggccgtccacctcagcccagccttcagcctccgcgcgacgatccaatgatggtcgggctacaggaaggtcaacttcgtttcgtgaggcacccattattccgataaattatgtagaaacttgaggtagaacctagtgggtgtagaatttatcagaatagtgggtgcctcacgaaacgaagttgacattcctgtagcccgaccatcattggatcgtcgtgcggaggctgaagggtgggctaaggtggacggccgggaagaggtagagggacgctccggaattggctcgaacgtccttcttgatgttgccgagtatagacgtctgaggaatgtcggcacgacgagagctgcatgattcgcttaccttttctacggagggagtcgaccgcggccataacttcctggttagtacccgcgataccatctctaagcttctcccacaaagttttcgcatcccttactaactcccctgcaatatcggtctgcatggaaggtagccacaatgtaagaaagtgcaagcccatgtataacgacaaaccgatgtaacaaaatatttcaatgcgagtagtaccgtcaagtgagccggagggtgctagctgcatatcatatatttgctcaatagtgggtggtcctcgctcgtctggatcctcgggtgcaagcagccggatgccttacacagcatcgtacgacgacatgtccagcttcggtggagggttgtcatcggtatccaatgagcttcgggcttcgcaaactgttgatgcgccccaggtgacagcccacacaaccagaggttagtgatttagaaggaaacgacaatgacccgtgtcgatctaaccgtgagcgccatgagccaaaccgtgtgtcactctcaggccctcgacatgccggaggagcaaggaaaagactataaaaaagcgagctggaacatctagaactatgactgacattgatgacgagtagaagtgaacattatgtctttaagttcgctggcaaacctaactggaccttgttatgcttttggctttctattactagcagtgaacattatttctttgtaccggttattcttcatgttatgtacgatgtttcgtagttcctaaatatatcatatttttacgccctattttgcaggcagttaacacatgatttttggttaactaataatttttcgtacgacagctaacacaaattatagtctcactaattaaattaatagtgcagtttcgatgttactcgtgcggttcaaattggatattacttttactttttactactatgacttatattacacactaatttcttttcacagagatgcaatcatacgcacctaaaatggcatcctctctttccaatcacgggacatttcacagagaatcaatcattcacatttaacagtgaagattccgccacgccgaaagtgccgtcgtcgctttgtaattactaaagaaaacaaagaagcagcatgtgccgccgaaagtgacagcgtccaattacttttctcgataggcatggcgtgactgaagaaacctgtgtccctttgtaattattaacttcacgagtgaaacagtctgacgcgccgaaagtgcgtcctctctttgtaattattggattgattagtgaagcagtccgacgcgccgtcgtctctttctaataattgagactatgtgcagcttcttcccatcccctataaataacaaccaaacctagcacacaactacgctatttcacatcgcgatatcgccatgttatcgcacttccaaacagcgaacatcggtatcacacagcgatacccatggtatattcccgcaaaaccttcgcaatccggtatatttttgcaaaatcatccgataaacagtatattttcaaaaaaatttcagcattggtagtggtaaggaaatctttgctatgtgagggaagtctatttattctgtcaaaataaatgaagtcattttcaccttgcccaaaacaaaatcaggaaaaggaaccgaactctgaatattctttcctgtccactaacctagctaggtgagggtgggaaaagaaaccattctaccctacatttctgaatattgggctgctcattttgattttgttaagggattgtaaaatgatcatgatttgcttggcgtgggagttagtacatgaattagattgatcagcttgtaccaattgtttaactgaacttgtttttatagcaaagtgctgcttttttagtctgcattgtagatttacgttgtgttaccttgacaaaattctattatactgaccaaactgtatgcaatagcgtttttgaggcttcactagctacattgaatttaaccttgtcaacttgtgaattgcgtatcaattgattgcattaattgttcctgattagtttttttatcgttttatgcagaatctggatgccttcttccaagtatgccctcggatgcatcttttgacccagctactgggattagtttcacatgcgatctgaatgataatattgctgccccatggccatcttctatgcaagcatcgtcttcttcatgcaataaatgtatgttgtatatctattgatcatgtattcctatgcgctagttgtatttacatgtttacgcacgtgcgccttttttgttgtttcttaggctccttttggatcataggaaaagtttcctgatccctgcaggaattgaactattttaaagtgaatttaatgccaaattcctatgttgcagacaggtccaaaaaaagttactcagccaaatagattagttgtgagcttaaaagttgaacccttctttaattcatctactgttatttttctaccttcttctgtaaaaacaatatgcaattaagtctgagttgccaattctatggtagagtgtaaaatattccccttgattccctcgctaaaaaaattttaaaaccttctgtttctatgttgctgcttcctcttttttattttttttgatcattttgaagaaagttgtggattttttttttcacttgttgagggcatcctcttcttctgggaaagaaacctctttgatcaataaattgcttgtctctatacagcttttgtcctggctttttaggttctgattttttagcggttctagcaaagctgtagtgacacctttacagttgcatggtgtcacaagcttcttgtggtgcttgaatgtatgtgctctgttgcttttatttattttaggttctcactgtaagttctgttattttgtattcagctgttaatattccagagagacctgctgcgacatcggcacaaaatggtaaggcaacatgtttatttttctctatccattccgtggaaacagtattcaacaatcaacactatacttgagctatgatatatctctgaatcagtataggagctttatattttgtggtcatatgaattaaaggtgatgtttcctgtcgcaggtgtcaaccagaacagactggagcttagcctacttatttatctgggcacccttgttgttgctatttggctacaagtctagtccagttagcgaattattaatttcagattcaggagagctgattggaattgtcaactgcggagtttttgtgcttgatgatcacatcaaagtgttgtaggttacatgtgctttttagttcctgatagctgttagtgtaatttcttgtaagccatataatagtagtaataatttattatgcctttgtatagagagaaagaagggaaaaaaattaaagggtgtgaaatgcgcaggacaatttagcaagaccactgttgtctgatgggagtacatcatattgggatggactacactccattattgtttagaatttatattattcaattgttcattttctgatgtatgaattaatcatgacagagaatcatataatctcatc</dnaseqindica> 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| External Link(s) |
