Difference between revisions of "Os07g0102300"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | SRL1 is expressed in various tissues and is expressed at low levels in bulliform cells. SRL1 protein is located at the plasma membrane and predicted to be a putative glycosylphosphatidylinositol (GPI)-anchored protein. | |
| + | |||
| + | Xiang et al have demonstrated that SRL1 regulates leaf rolling through inhibiting the formation of bulliform cells by negatively regulating the expression of genes encoding vacuolar H+-ATPase subunits and H+-pyrophosphatase, which will help to understand the mechanism regulating leaf rolling<ref name="ref1" />. | ||
===Expression=== | ===Expression=== | ||
Revision as of 08:43, 27 August 2013
SEMI-ROLLED LEAF 1 (SRL1), a gene involved in the regulation of leaf rolling.
Contents
Annotated Information
Function
SRL1 is expressed in various tissues and is expressed at low levels in bulliform cells. SRL1 protein is located at the plasma membrane and predicted to be a putative glycosylphosphatidylinositol (GPI)-anchored protein.
Xiang et al have demonstrated that SRL1 regulates leaf rolling through inhibiting the formation of bulliform cells by negatively regulating the expression of genes encoding vacuolar H+-ATPase subunits and H+-pyrophosphatase, which will help to understand the mechanism regulating leaf rolling[1].
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
- National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, Zhejiang, China
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA
- US Department of Agriculture/Agricultural Research Service, Plant Gene Expression Center, 800 Buchanan St, Albany, CA 94710, USA
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0102300 |
|---|---|
| Description |
Conserved hypothetical protein |
| Version |
NM_001065217.1 GI:115470166 GeneID:4342175 |
| Length |
9406 bp |
| Definition |
Oryza sativa Japonica Group Os07g0102300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:133173..142578 |
| Sequence Coding Region |
133549..133628,133780..133824,134513..134656,139932..139943,140098..140343 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:133173..142578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:133173..142578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggatggcccccgccggtcgcctcctcctcatctcctgcctcctctgtgtgcccaattcatttggatttgcatttgctgtggaggaggaggaggacggcagcgggctgatgccacagctctcacccaccggctctcccaaccccttggttcccttcctcgcgcccgcccctctcgcgccattcttcaacaccacccctcctaacttgtcaggcaagtgctcattgaattttactgctgtcggtgacctcatcaccaccactgctgtcgactgctttgcgtccttcgccccgttcctcgccaatgtcatctgctgcccccagctccaggccatgctcaccatcctcattgggcagtccagcaagcagactggctcccttgctttggatcccaccgtcgctacctactgcctctccgatgttcagcagctattgttgagccagggcgctagtgatgagctccacaacatttgctcccttcacctctccaatgtcaccgagggatcatgccccgttagcaccgtcgatgcctttgaagctgtcatcgactcctcaaagctcctcgaggcctgtcacaagattgatcctgtcaacgagtgctgcagccgcacctgccagaatgctatcaacgatgcctcccagaagatctctttcaaagacggcggtttgacaagctacgctggtagccccaaagttgatagctgcaggaatgtcgtgctcagatggctatccagtaggcttggcccatcatctgcaaagcaaatgctcaggcagatatctaactgcaatgtcaatggagtttgtccactaagctttccagacacgagtaaagtggcaaaagagtgcagtggaactgtcaagaatggtacttcatgttgcaaggctatggacagttatgtatctcacttgcaaaagcaaagcttcataacaaatttgcaagctttagattgtgcccaattccttggtgacaagttgcaaaagatgaatgtcagtatgaatgtttatagctcatgtcagataactctcaaggacttttctcttcaagttggatctcaagaatctggatgccttcttccaagtatgccctcggatgcatcttttgacccagctactgggattagtttcacatgcgatctgaatgataatattgctgccccatggccatcttctatgcaagcatcgtcttcttcatgcaataaatctgttaatattccagagagacctgctgcgacatcggcacaaaatggtgtcaaccagaacagactggagcttagcctacttatttatctgggcacccttgttgttgctatttggctacaagtctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPT GSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTAVGDLITTTAVDCFASFAPFLAN VICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISF KDGGLTSYAGSPKVDSCRNVVLRWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTS KVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQFLGDKLQKMNVSMNV YSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQ ASSSSCNKSVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV</aaseq> |
| Gene Sequence |
<dnaseqindica>8951..9030#8755..8799#7923..8066#2636..2647#2236..2481#671..1255#381..545#167..215#aggttttgctgctgtccgcctgcctgcctactttctccacttttttctcctcctcctcctcttcttcttccttcgtttcgcctcctctactcttctaagttccaacttccaactagctcgactcaagtgaagagtccgccgcctttccctcctcgccgccgctcggatggggatggcccccgccggtcgcctcctcctcatctcctgcctcctctgtcagtagtttgcctcttgatccctcctctgtttcctttcctttccagtttcccatgcatttcttctctgtttcaccaaatctaattgggttgtttcttgattttgatctgtatgtgtgtggccactgctctgaatccgttaattaaataaatataaatgcgcaggtgtgcccaattcatttggatttgcatttgctgtggaggaggaggaggacggcagcgggctgatgccacagctctcacccaccggctctcccaaccccttggttcccttcctcgcgcccgcccctctcgcgccattcttcaacaccacccctcctaacttgtcaggtacccttaattacctctcctccttcgatcttcttacacttctcttataggagtataatatataggagtattaattaattaagagtacaaataagtaattgccaatgtaattttggtggatgcaggcaagtgctcattgaattttactgctgtcggtgacctcatcaccaccactgctgtcgactgctttgcgtccttcgccccgttcctcgccaatgtcatctgctgcccccagctccaggccatgctcaccatcctcattgggcagtccagcaagcagactggctcccttgctttggatcccaccgtcgctacctactgcctctccgatgttcagcagctattgttgagccagggcgctagtgatgagctccacaacatttgctcccttcacctctccaatgtcaccgagggatcatgccccgttagcaccgtcgatgcctttgaagctgtcatcgactcctcaaagctcctcgaggcctgtcacaagattgatcctgtcaacgagtgctgcagccgcacctgccagaatgctatcaacgatgcctcccagaagatctctttcaaagacggcggtttgacaagctacgctggtagccccaaagttgatagctgcaggaatgtcgtgctcagatggctatccagtaggcttggcccatcatctgcaaagcaaatgctcaggcagatatctaactgcaatgtcaatggaggtaccccctcaaactagcaacttcaatctactaccggcctttacaatgccatcagccagtatgttatgttctttacaatagaccacacaccctgctcctgatctatattgcttagcatttatttagcttagttattatttagtccctctataaatcaaactgttagaagtgcaccagtctgttctcacatcttgccctgtgtagtttgcaactgtattcatgtaaacttgctttcacgtgtcactatatagcactatcccctgcaagttagattgatttagttgagtttatataggctatagggaatcaatgttggtatgtaagtatcaaactgatagaaagaccattgattcagacaagcaccaaagagggaaaaattagttcaagttgatggacgcataagaataaaatagctcactcttactgtcttacatgaccataaaggtatgcaagtgctgcagacagatcctttggatttaagggcggcagttgattttcttccaaagagaacaccgtaatttaaagcaaagcactaaacaatccatacatgatatatctacatctaagcatagtctcttgtgtccatgtgggtctttcggaacactttgctgccattggaagttgactgcatggaactcaataggagccttagttctttacttcaagtatctaggtcagtgctatcataatatgctaggttctgaaaacatgtgggccgttgccacttatattaggtctgatggatctcagatgtatgaactggatggaaataataagaatctttagtacactagaactgtcatgtatgtacattgaacaagttacagaaattttctgtacctagtctttatgacaaattgtatttttcttttttttatcaccatcattttaacataagcaattatgtcttaagttttgttctcactgttcagtgcttgtgttctttatgctgagaaattgtttgcgtttcaactctccagtttgtccactaagctttccagacacgagtaaagtggcaaaagagtgcagtggaactgtcaagaatggtacttcatgttgcaaggctatggacagttatgtatctcacttgcaaaagcaaagcttcataacaaatttgcaagctttagattgtgcccaattccttggtgacaagttgcaaaagatgaatgtcagtatgaatgtttatagctcatgtcagataactctcaaggacttttctcttcaaggtaagttagaaaagaacattcagttgtttgtgcattaagatcatattttaaatgtcatttgtgtatttcttggaaactgaattgatggagtttctttccgtcgttcaacttacgtgtttgaccgattggaccaccctgctgatttgacaaacagttggatctcaaggtatgtgaacattttcaattatttttaccggtcatataacagtttatattaacgagagtatgtgcatcttcagttcttctgtttgactagcctagcattggtagaaaaatttttggaaatatacttgtttttgactggaattgcaagaataggctgattaggggaagttttgcggaaatatactggtgtcgcgccttgaatgagcgagagagcgatatcacgtaaaccatgcgcgaaagcggcggcgctatcgctaattgagagagagagagagagaggggtaatgcgtcggtctcgcattcggaaagcgcgagaacgaagcggtatcgcacttttgtaaatcgaaagcgtgggccgtccgacgccgcctgacgtacgcgggccacgaagcggtctcgagctttgagtgcgcgataacgcgtgcggtatcgctgtcggctcgcgcgagaccgtagtggcgggggccgtctgacgcacgtgaggcccggagcagtctcgcgctatgcgccagcgagagcgcggtcggtctcgcgctttgcgcgaacgagagcgccagcggtatcgcggtcggctagcgcgataccgttgcggcgtggcccacccccctaatcggctgataatcccgtaggtggcgacagcaacggcttcggtcaatatcgcgcttcgggagcgcgagagcggtcagctaattgcgcatgcaaatcaggtgcaagtcgttaatatttcatgagccgttgctatgtagaaagtataattttttttcatatttttttattatgtgtgcaacatatatacataaatgaacatgagaatatgtatatattgaaaataggcaaagattgtgtacgcggctatgagaagaaaaataaatatcttggaatttgcaaaataatgatatcagttacagatacatataggaaagaaacaatatattacctatagaaaaatagaaattgaatatatatttattaaaaatatataaaggagtagagagatcattcaagagcaatttttacaaagttaacaaagaatatgaatttagaatatgtcatattcacagagaaaatcacatttgcatattcatagactcggatcttatgacaagaaccgtgtagcgagttaacgaactacctagttcttgccacaagatcgggcctaagaatatgcaacaccgagtttatgaatttgcagtagtaggtcatattcacaaaaggacgctggaacttgaaaaaaagagtgggtgtaagaatgtattaaaaaaatcacatttgtatattcatagactcgatcttagggcaggaaccgtgtagcgagtgaacgaacaagatagagcgagttcaccaactactcagtttttgcctcaagattgggcctaagaatatgcaacacgaagttggaaccagcagaacgtttatggagaagagatgtagttgtgtgctaggtttggttatttataggggatgggaagaagctgcgcgtagtctcaattattagaaagagatgacgacgcgtcggactgcttcactaatcaatccaataattacaaagagaggacgcactttcggcgcatcagactgtttcactcgtgaagttactaattacaaagggacacaggtttcttcagtcatgccatgcctatcgagaaaagtgattggacactgtcactttcggcggcacatgctgcttcttgttttctttagttattacaaagcgacgacggcactttcggcgcggcggaatcttcactgttaaatgtgaatgattgattctctgtgaaatgtcccgtgattggaaagagaggatgccattttaggtgcgtatgattgtatctctgtgaaaagaaattagtgtgtaatgtaagtcatagtagtaaaaaataaaagtaatatccaatttgaatcgcacgagtaacatcgaaactgcactattaatttaattagtgagactataatttgtgttagctgtcatacgaaaaattattagttaaccaaaaatcatgtgttaactgcctgcaaaatagggcgtaaaaatatgatatatttcggaactacgaaacattgtacataacatgaagaataaccagtacaaagaaataatgttcactgctagtaatagaaagccaaaagcataacaaggtccagttaggtttgccagcgaacttaaagacataatgttcacttctactcgtcatcattgttagtcatagtcctagatgttccagctcgcttttttgtagtctttttccttgctcctgcggcatgtcgagggcctgagattgacagacggtttagctcatggcgctcacggttagatcgacgcgggtcattgttgtttccttctaaatcgccaacctctggttgtgtgggctgtcacctgggcgcatcaacaatttgcgaagcccaaagctcattgggtaccgatgacgaccctccaccgaagctagacatgtcgccgtacgatgccgtgtaaggcatctgactgcttgcacccgaggatccagacgagcgaggactacccactattgagtaaatatatgatatgcagctagcacccttgactcacttgacggtactactcgcattgaaatattttgttgcatcggtttgtcgttatacatgggcttgcactttcttacattgttgctaccttccatgcagaccgatattgcaggggagttagtaagggatgcgaaaactttgtgggagaagcttagagatggtatcgcgggtactaaccaggaagttatagccgcggttgactccctccgtagaaaaggtaagcgaatcatgcggctcgcatcgtgccgacattcctcggacgtctatactctggcaacatcaaggacgttcgagccaatgccggagcgtccctctacctcttcccggccgtccacctcagcccagccttcagcctccgcgcgacgatccaatgatggtcgggctacaggaaggtcaacttcgtttcgtgaggcacccattattccgataaattatgtagaaacttgaggtagaacctagtgggtgtagaatttatcagaatagtgggtgcctcacgaaacgaagttgacattcctgtagcccgaccatcattggatcgtcgtgcggaggctgaagggtgggctaaggtggacggccgggaagaggtagagggacgctccggaattggctcgaacgtccttcttgatgttgccgagtatagacgtctgaggaatgtcggcacgacgagagctgcatgattcgcttaccttttctacggagggagtcgaccgcggccataacttcctggttagtacccgcgataccatctctaagcttctcccacaaagttttcgcatcccttactaactcccctgcaatatcggtctgcatggaaggtagccacaatgtaagaaagtgcaagcccatgtataacgacaaaccgatgtaacaaaatatttcaatgcgagtagtaccgtcaagtgagccggagggtgctagctgcatatcatatatttgctcaatagtgggtggtcctcgctcgtctggatcctcgggtgcaagcagccggatgccttacacagcatcgtacgacgacatgtccagcttcggtggagggttgtcatcggtatccaatgagcttcgggcttcgcaaactgttgatgcgccccaggtgacagcccacacaaccagaggttagtgatttagaaggaaacgacaatgacccgtgtcgatctaaccgtgagcgccatgagccaaaccgtgtgtcactctcaggccctcgacatgccggaggagcaaggaaaagactataaaaaagcgagctggaacatctagaactatgactgacattgatgacgagtagaagtgaacattatgtctttaagttcgctggcaaacctaactggaccttgttatgcttttggctttctattactagcagtgaacattatttctttgtaccggttattcttcatgttatgtacgatgtttcgtagttcctaaatatatcatatttttacgccctattttgcaggcagttaacacatgatttttggttaactaataatttttcgtacgacagctaacacaaattatagtctcactaattaaattaatagtgcagtttcgatgttactcgtgcggttcaaattggatattacttttactttttactactatgacttatattacacactaatttcttttcacagagatgcaatcatacgcacctaaaatggcatcctctctttccaatcacgggacatttcacagagaatcaatcattcacatttaacagtgaagattccgccacgccgaaagtgccgtcgtcgctttgtaattactaaagaaaacaaagaagcagcatgtgccgccgaaagtgacagcgtccaattacttttctcgataggcatggcgtgactgaagaaacctgtgtccctttgtaattattaacttcacgagtgaaacagtctgacgcgccgaaagtgcgtcctctctttgtaattattggattgattagtgaagcagtccgacgcgccgtcgtctctttctaataattgagactatgtgcagcttcttcccatcccctataaataacaaccaaacctagcacacaactacgctatttcacatcgcgatatcgccatgttatcgcacttccaaacagcgaacatcggtatcacacagcgatacccatggtatattcccgcaaaaccttcgcaatccggtatatttttgcaaaatcatccgataaacagtatattttcaaaaaaatttcagcattggtagtggtaaggaaatctttgctatgtgagggaagtctatttattctgtcaaaataaatgaagtcattttcaccttgcccaaaacaaaatcaggaaaaggaaccgaactctgaatattctttcctgtccactaacctagctaggtgagggtgggaaaagaaaccattctaccctacatttctgaatattgggctgctcattttgattttgttaagggattgtaaaatgatcatgatttgcttggcgtgggagttagtacatgaattagattgatcagcttgtaccaattgtttaactgaacttgtttttatagcaaagtgctgcttttttagtctgcattgtagatttacgttgtgttaccttgacaaaattctattatactgaccaaactgtatgcaatagcgtttttgaggcttcactagctacattgaatttaaccttgtcaacttgtgaattgcgtatcaattgattgcattaattgttcctgattagtttttttatcgttttatgcagaatctggatgccttcttccaagtatgccctcggatgcatcttttgacccagctactgggattagtttcacatgcgatctgaatgataatattgctgccccatggccatcttctatgcaagcatcgtcttcttcatgcaataaatgtatgttgtatatctattgatcatgtattcctatgcgctagttgtatttacatgtttacgcacgtgcgccttttttgttgtttcttaggctccttttggatcataggaaaagtttcctgatccctgcaggaattgaactattttaaagtgaatttaatgccaaattcctatgttgcagacaggtccaaaaaaagttactcagccaaatagattagttgtgagcttaaaagttgaacccttctttaattcatctactgttatttttctaccttcttctgtaaaaacaatatgcaattaagtctgagttgccaattctatggtagagtgtaaaatattccccttgattccctcgctaaaaaaattttaaaaccttctgtttctatgttgctgcttcctcttttttattttttttgatcattttgaagaaagttgtggattttttttttcacttgttgagggcatcctcttcttctgggaaagaaacctctttgatcaataaattgcttgtctctatacagcttttgtcctggctttttaggttctgattttttagcggttctagcaaagctgtagtgacacctttacagttgcatggtgtcacaagcttcttgtggtgcttgaatgtatgtgctctgttgcttttatttattttaggttctcactgtaagttctgttattttgtattcagctgttaatattccagagagacctgctgcgacatcggcacaaaatggtaaggcaacatgtttatttttctctatccattccgtggaaacagtattcaacaatcaacactatacttgagctatgatatatctctgaatcagtataggagctttatattttgtggtcatatgaattaaaggtgatgtttcctgtcgcaggtgtcaaccagaacagactggagcttagcctacttatttatctgggcacccttgttgttgctatttggctacaagtctagtccagttagcgaattattaatttcagattcaggagagctgattggaattgtcaactgcggagtttttgtgcttgatgatcacatcaaagtgttgtaggttacatgtgctttttagttcctgatagctgttagtgtaatttcttgtaagccatataatagtagtaataatttattatgcctttgtatagagagaaagaagggaaaaaaattaaagggtgtgaaatgcgcaggacaatttagcaagaccactgttgtctgatgggagtacatcatattgggatggactacactccattattgtttagaatttatattattcaattgttcattttctgatgtatgaattaatcatgacagagaatcatataatctcatc</dnaseqindica> |
| External Link(s) |
- ↑ Cite error: Invalid
<ref>tag; no text was provided for refs namedref1
