Difference between revisions of "Os03g0755100"
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===Function=== | ===Function=== | ||
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Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for | Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for | ||
internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. | internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH. | ||
Revision as of 08:58, 7 May 2014
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Contents
Annotated Information
Function
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Os03g0755100,which also called OsALS1 and localized at the tonoplast, is responsible for sequestration of (aluminum) Al into the vacuoles, which is required for
internal detoxification of Al in rice. The expression of OsAIS1 is regulated by ART1, a C2H2-type zinc finger transcription factor. OsALS1 encodes a half-size ABC transporter that is a member of the TAP (transporter associated with antigen processing) sub-group.OsALS1is localized at the tonoplast and expressed in all tissues. Some investigations have demonstrated knockout of OsALS1 resulted in increased sensitivity to Al Expression of OsALS1 was rapidly and specifically induced by Al in the roots, but not by other metals or low pH.
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os03g0755100 |
|---|---|
| Description |
Similar to Transporter associated with antigen processing-like protein |
| Version |
NM_001057846.1 GI:115455420 GeneID:4334151 |
| Length |
5341 bp |
| Definition |
Oryza sativa Japonica Group Os03g0755100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:32000637..32005977 |
| Sequence Coding Region |
32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:32000637..32005977 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:32000637..32005977 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag</cdnaseq> |
| Protein Sequence |
<aaseq>MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ</aaseq> |
| Gene Sequence |
<dnaseqindica>130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc</dnaseqindica> 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