Difference between revisions of "Os07g0641200"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | Ca2+/calmodulin-dependent protein kinase (CCaMK) has been identified as a | |
| + | 50 component of CSP, which is required for both rhizobial and mycorrhizal endosymbioses | ||
| + | 51 to take up nitrogen and phosphorus from soil, respectively (4-6). Legume CCaMK is a | ||
| + | 52 key player in the coordinated induction of infection thread formation and nodule | ||
| + | 53 organogenesis (7), providing fixed nitrogen in exchange for plant photosynthates as | ||
| + | 54 energy (5, 8). Orthologs of CSP genes including CCaMK are also well conserved in | ||
| + | 55 non-leguminous plants | ||
===Expression=== | ===Expression=== | ||
Revision as of 05:04, 15 May 2014
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Contents
Annotated Information
Function
Ca2+/calmodulin-dependent protein kinase (CCaMK) has been identified as a 50 component of CSP, which is required for both rhizobial and mycorrhizal endosymbioses 51 to take up nitrogen and phosphorus from soil, respectively (4-6). Legume CCaMK is a 52 key player in the coordinated induction of infection thread formation and nodule 53 organogenesis (7), providing fixed nitrogen in exchange for plant photosynthates as 54 energy (5, 8). Orthologs of CSP genes including CCaMK are also well conserved in 55 non-leguminous plants
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os07g0641200 |
|---|---|
| Description |
Similar to CaMK1 |
| Version |
NM_001066961.2 GI:297607689 GeneID:4344066 |
| Length |
1740 bp |
| Definition |
Oryza sativa Japonica Group Os07g0641200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:27343222..27344961 |
| Sequence Coding Region |
27343638..27343775 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:27343222..27344961 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:27343222..27344961 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaa</cdnaseq> |
| Protein Sequence |
<aaseq>ELGLGPSVPLHVVLQDWIRHADGKLSFLGFIKLLHGVSSRSIPK A</aaseq> |
| Gene Sequence |
<dnaseqindica>1187..1324#gtgattgcctacattttgctttgtgggagccgtcctttctgggcacgcaccgaatcaggaatatttcgagctgtgctgaaggcagaaccaagttttgatgaggctccatggcctactctcactgccgaagcaaaagactttgtaaaacgactgcttaataaggattaccgcaagaggatgactgctgcacaagctctcagtaagcatcagatttgtttgtcagtgtaatattgtggcactcgctttttatcgaatgatggttaattgctcacttgcatcatgatatctgcaggtcatccgtggatccgaaattctcaacaagtgaaaatacctttagatatgataatctacaagcttatgcgagcttatatcagttcgtcttccttgcggaagtccgctttgagggtatgcataaacctttgtgttgttcttatctggtctgtaaatgactattcttgctgcttatattttttttcattttttacatgtgtcaagttatccatgtacgagcaatatattgcttttggttgtgcagtttaagtaggcttataccgatatgtcttgactctgatgacatcaccaactagccattttaagcaatgtccatacattttgcaggccctagctaagacattgacggcaaatcaactgttctatctaagagagcaatttgaattgttgggtccaaacaagaatggttatatctccttgcaaaatttgaaaacggtaggtattctcacctttgttacttgatctaatttatagcatgcaattgctgaataagtaaatgttcctacaggccttggtaaagaattctacagatgcaatgaaggattctagggttattgactttgttaacacggtaagactctttcatagaacattctcttgtgttagtatatcggactgagataaacactgacctgctcaagccatggtactaggtgtgcactcttcagtacagaaaattggattttgaagagttcgctgcttctgccgtcagcgtttatcagatggaagctttggaaacatgggagcagcacgcacggcgtgcatacgagctattcgataaggagggcaaccgacctattgtaattgaggagcttgcatcggtatgatttgagctgaagtaactttttcgcatgattattaaacatttctaactgttatatttttcatctcttaggaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaagataaaatcattcttgcatcaaccaatgaggtcaaattgatggctaagccaaattctctggatggtgttcgttgtgttgcgcggtttgaggtggttggagaggatgtcttgaaaatcagacaaaaaaaagaaagtgacagtttgtgtaagaggtgaaaatgttcttgctgctactacttctacccctccccttcgccacgtcggattgatgttgtactgaagctgtgtagacgatgtacagatgatgaggataggaaaaagaatatggaagggttgaaaagatttgagactggtgtttgtcaaagtcttgcattgtagtagtgcatcttttgtctcaaataagacatttaacgtctcaccccttggtctctcattgtgttattatgccagtatgcgacagccctgaggttacagat</dnaseqindica> |
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