Difference between revisions of "Os07g0641200"
(→Function) |
(→Expression) |
||
| Line 12: | Line 12: | ||
===Expression=== | ===Expression=== | ||
| − | + | Oryza sativa CCaMK (OsCCaMK) genes were highly 56 expressed in roots of field-grown rice at vegetative and reproductive stages; such expression is required for mycorrhization | |
===Evolution=== | ===Evolution=== | ||
Revision as of 07:18, 15 May 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Ca2+/calmodulin-dependent protein kinase (CCaMK) has been identified as a 50 component of CSP, which is required for both rhizobial and mycorrhizal endosymbioses 51 to take up nitrogen and phosphorus from soil, respectively (4-6). Legume CCaMK is a 52 key player in the coordinated induction of infection thread formation and nodule 53 organogenesis (7), providing fixed nitrogen in exchange for plant photosynthates as 54 energy (5, 8). Orthologs of CSP genes including CCaMK are also well conserved in 55 non-leguminous plants
Expression
Oryza sativa CCaMK (OsCCaMK) genes were highly 56 expressed in roots of field-grown rice at vegetative and reproductive stages; such expression is required for mycorrhization
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0641200 |
|---|---|
| Description |
Similar to CaMK1 |
| Version |
NM_001066961.2 GI:297607689 GeneID:4344066 |
| Length |
1740 bp |
| Definition |
Oryza sativa Japonica Group Os07g0641200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:27343222..27344961 |
| Sequence Coding Region |
27343638..27343775 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:27343222..27344961 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:27343222..27344961 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaa</cdnaseq> |
| Protein Sequence |
<aaseq>ELGLGPSVPLHVVLQDWIRHADGKLSFLGFIKLLHGVSSRSIPK A</aaseq> |
| Gene Sequence |
<dnaseqindica>1187..1324#gtgattgcctacattttgctttgtgggagccgtcctttctgggcacgcaccgaatcaggaatatttcgagctgtgctgaaggcagaaccaagttttgatgaggctccatggcctactctcactgccgaagcaaaagactttgtaaaacgactgcttaataaggattaccgcaagaggatgactgctgcacaagctctcagtaagcatcagatttgtttgtcagtgtaatattgtggcactcgctttttatcgaatgatggttaattgctcacttgcatcatgatatctgcaggtcatccgtggatccgaaattctcaacaagtgaaaatacctttagatatgataatctacaagcttatgcgagcttatatcagttcgtcttccttgcggaagtccgctttgagggtatgcataaacctttgtgttgttcttatctggtctgtaaatgactattcttgctgcttatattttttttcattttttacatgtgtcaagttatccatgtacgagcaatatattgcttttggttgtgcagtttaagtaggcttataccgatatgtcttgactctgatgacatcaccaactagccattttaagcaatgtccatacattttgcaggccctagctaagacattgacggcaaatcaactgttctatctaagagagcaatttgaattgttgggtccaaacaagaatggttatatctccttgcaaaatttgaaaacggtaggtattctcacctttgttacttgatctaatttatagcatgcaattgctgaataagtaaatgttcctacaggccttggtaaagaattctacagatgcaatgaaggattctagggttattgactttgttaacacggtaagactctttcatagaacattctcttgtgttagtatatcggactgagataaacactgacctgctcaagccatggtactaggtgtgcactcttcagtacagaaaattggattttgaagagttcgctgcttctgccgtcagcgtttatcagatggaagctttggaaacatgggagcagcacgcacggcgtgcatacgagctattcgataaggagggcaaccgacctattgtaattgaggagcttgcatcggtatgatttgagctgaagtaactttttcgcatgattattaaacatttctaactgttatatttttcatctcttaggaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaagataaaatcattcttgcatcaaccaatgaggtcaaattgatggctaagccaaattctctggatggtgttcgttgtgttgcgcggtttgaggtggttggagaggatgtcttgaaaatcagacaaaaaaaagaaagtgacagtttgtgtaagaggtgaaaatgttcttgctgctactacttctacccctccccttcgccacgtcggattgatgttgtactgaagctgtgtagacgatgtacagatgatgaggataggaaaaagaatatggaagggttgaaaagatttgagactggtgtttgtcaaagtcttgcattgtagtagtgcatcttttgtctcaaataagacatttaacgtctcaccccttggtctctcattgtgttattatgccagtatgcgacagccctgaggttacagat</dnaseqindica> |
| External Link(s) |
