Difference between revisions of "Os06g0725900"
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| − | + | This gene encodes FtsH protease 1 (OsFtsH1) in Oryza sativa, homologue of AtFtsH1/5. | |
==Annotated Information== | ==Annotated Information== | ||
Revision as of 02:27, 19 May 2014
This gene encodes FtsH protease 1 (OsFtsH1) in Oryza sativa, homologue of AtFtsH1/5.
Contents
Annotated Information
Function
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Expression
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Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os06g0725900 |
|---|---|
| Description |
Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) |
| Version |
NM_001065160.1 GI:115470051 GeneID:4342113 |
| Length |
7643 bp |
| Definition |
Oryza sativa Japonica Group Os06g0725900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:31747348..31754990 |
| Sequence Coding Region |
31747627..31747848,31752229..31752400,31752490..31752673,31752768..31753014,31753720..31754955 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:31747348..31754990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:31747348..31754990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgccgccgtgctccatctcctccgcctcccacctcctcatcactgcctccctccccaagccctccctccgcccacctcgcctcccccaccccaagcccctccccgccgccctcctcgccctcgccgccgccgcccccacgctccccgccctcgccgacgtgcccgcgccacccccctccccgacccaggatgtccaggtactagaggccccctccccggccgccaaccctttctccaacgccctcctcaccgcgcctaagcccacctcctccgccgccgccgacctccccgagggcgcccagtggcgctacagcgagttcctcagcgccgtcaagaagggcaaggtcgagcgcgtcaggttctccaaggatggtggcctactccagctcaccgccatcgacggccgccgcgccaccgtcgtcgtccccaacgaccccgatctcattgacatcctcgccaccaacggcgtcgacatctccgtcgccgagggcgacgccgccggccccggcggattcctcgccttcgtcggcaacctcctcttccccttcctcgctttcgctggcctcttcttcctcttccgccgcgcccagggcggccccggcgctggacctggcggcctcggcgggcccatggacttcggccgctccaagagcaagttccaggaggtgcccgagactggcgtcaccttcgtcgacgtcgccggcgccgaccaggccaagctcgagctgcaggaggtcgtcgatttcctcaagaaccccgacaagtacaccgcgctcggggccaagatccccaagggatgcctgctcgtcggcccgcccggaaccgggaagacactgctggcgcgtgccgtcgccggggaggccggagtgccattcttctcctgcgccgcgtccgagttcgttgagctgttcgtcggtgtcggtgcctccagggtcagggacctgttcgagaaggccaaggccaaggccccttgcatcgtcttcattgatgaaattgatgccgtcgggaggcagcgtggtgctgggctcggagggggaaatgatgagagggagcagaccattaaccagctcttgactgagatggatggatttgccggcaatagcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttcttcgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtcaagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttggtggaagggttgccgaagaggtgatctttggccaagaaaatgtgacaactggggcctccaacgattttatgcaggtttcacgtgttgcaagacaaatggttgaaagatttggattcagcaagaagatcgggcaagttgcgattggtggacctggtggaaatcctttcttgggccagcagatgtcgagccagaaggactactcgatggccaccgcggatgttgtggatgctgaggtgagggagctcgtggagaaggcctactcaagagcaacgcagatcatcacgacacacatcgacatcctccacaagcttgctcagcttctgatggagaaggagacggtggacggggaagagttcatgagcctgttcatcgacggtcaggcagagttgtttgtcgcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAPPCSISSASHLLITASLPKPSLRPPRLPHPKPLPAALLALAA AAPTLPALADVPAPPPSPTQDVQVLEAPSPAANPFSNALLTAPKPTSSAAADLPEGAQ WRYSEFLSAVKKGKVERVRFSKDGGLLQLTAIDGRRATVVVPNDPDLIDILATNGVDI SVAEGDAAGPGGFLAFVGNLLFPFLAFAGLFFLFRRAQGGPGAGPGGLGGPMDFGRSK SKFQEVPETGVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEID AVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGR FDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAI LAARRDLKEISKDEISDALERIIAGPEKKNAVVSEEKRRLVAYHEAGHALVGALMPEY DPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQE NVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMAT ADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAE LFVA</aaseq> |
| Gene Sequence |
<dnaseqindica>7143..7364#2591..2762#2318..2501#1977..2223#36..1271#tctccacccccaccttcgcccacctcgcatcgaccatggcgccgccgtgctccatctcctccgcctcccacctcctcatcactgcctccctccccaagccctccctccgcccacctcgcctcccccaccccaagcccctccccgccgccctcctcgccctcgccgccgccgcccccacgctccccgccctcgccgacgtgcccgcgccacccccctccccgacccaggatgtccaggtactagaggccccctccccggccgccaaccctttctccaacgccctcctcaccgcgcctaagcccacctcctccgccgccgccgacctccccgagggcgcccagtggcgctacagcgagttcctcagcgccgtcaagaagggcaaggtcgagcgcgtcaggttctccaaggatggtggcctactccagctcaccgccatcgacggccgccgcgccaccgtcgtcgtccccaacgaccccgatctcattgacatcctcgccaccaacggcgtcgacatctccgtcgccgagggcgacgccgccggccccggcggattcctcgccttcgtcggcaacctcctcttccccttcctcgctttcgctggcctcttcttcctcttccgccgcgcccagggcggccccggcgctggacctggcggcctcggcgggcccatggacttcggccgctccaagagcaagttccaggaggtgcccgagactggcgtcaccttcgtcgacgtcgccggcgccgaccaggccaagctcgagctgcaggaggtcgtcgatttcctcaagaaccccgacaagtacaccgcgctcggggccaagatccccaagggatgcctgctcgtcggcccgcccggaaccgggaagacactgctggcgcgtgccgtcgccggggaggccggagtgccattcttctcctgcgccgcgtccgagttcgttgagctgttcgtcggtgtcggtgcctccagggtcagggacctgttcgagaaggccaaggccaaggccccttgcatcgtcttcattgatgaaattgatgccgtcgggaggcagcgtggtgctgggctcggagggggaaatgatgagagggagcagaccattaaccagctcttgactgagatggatggatttgccggcaatagcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttcttcgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtcaagattcttgaggtgagcacttgcctattgtttagctagcttgtgatttcctatgcttttagtagatattgttctgaatttcaatgaaccaattcacaaatttgcttagttcagtgccattgatgataatttaattggcattcttatagtagctttgtccatttagtcgaaattactaattgcttagaacatgaagaacttaactaaaaatcaaactttgcctgagctgactcaaagatggaccattgttcatgtatcatagcatatgttgttatacagctgaccatggcatgattttgctctgcatcatagttcaagatattatgtacagttactttaaccgtagaatgatcttattgtggtctgcatatctaatcaggagcagctgtactcatttgcagaaatttatgtggttgatatatatgttagctcatatcaatccgtatgggtactttgcaatttctgtttatgtagtccattccatcgtcctaagagggatgctggttttgcagtgctacttcatctagtctttgatgctccttaacttagggatttcaatgtatttccatctactgctaattttctttgaagaagctatgctgagatacatagagtgcctttctgaatgctgatcgacttttccttatggcttcccaatttgataagcttttatctgtaccaaagcgcaagtttacaagacatgttattgtctgataggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtggcttaccatggtaaatcttgtcaccatattaacttgtgacttgagctgaaattatcctggtgtgcagaggttcctaatccatttttgaacttttcaatttgcagaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttggtggaaggtgggttttagtgaaatgttcatatctgcgtacatgtgctattgttgttgtgcaaagtcttgaactgtgtgagcttacatggtttgcagggttgccgaagaggtgatctttggccaagaaaatgtgacaactggggcctccaacgattttatgcaggtttcacgtgttgcaagacaaatggttgaaagatttggattcagcaagaagatcgggcaagttgcgattggtggacctggtggaaatcctttcttgggccagcaggtaaatcactataactgaaatagactatcaaagaagaaaaacttcttaccctagaagcagagtctgtgaaaattaactgaagaactagacgtgcaaacttcaacaatgacaacatatgagcccagcctttcttgccctagtgtgcatctagtgttctgaagtgtctactgtcctatggggaaggtccatttcctgaagttcagtttgttcctttaaccttgatgaatagtatagtctagtctttcctgtaactttgtgtcacgccccgaactagtcccgaccggaactagcccgtgacgctccaaattaacctgttaatcgataccagtcctaggaaacagtgctggtatcacagggagacagagtatcacagcaacagaggtctctttattatagagtagaagtacagtcatgttgggctgcggacagatcccgagctcacaactgcattacaaaaggaaagcggaagccaggacttggaccaatcatcacaggcgcgacttgggaactaggccgaaaccctaaaactcatcgtagccgacttgctcctggaagaactcctcgtcagcaggatccacttcatcttcttcagcaactggggggggggggggattatttatatagagcaagggtgagtacgggagtactcagcaagccaggggaaaataagtgtttaatgcaggcttcaaggaaaggctgttgtttttgcaattgattttatttgaactctttttctaaaacaactaggtgagtgcttctcaaacgacacggatgagacagtgcgtctcgtccggtcggagtatgtgcaatgtgtcagtctttaggattgcaacaaggttggcacccggccaacagcttttcaaacggccacccgggccaacaacttttcaaacggccacccgggcctagctgatctcatcagctgcagatttttcaaacatcgaaccccttttcacaacagcaatttcacaagcagtagtcaaacaaaactacgctaggaatcacctcacatccgcccatgaccgtgggcacggctgttcgaacagtttaatgacctctgcagagggggtacactttacccacatgacattactaacccggatcatccagcccgtggggatcagccacgtcgggagacctccaagctttcatgacaaggcatttcgaaagccgacacaggtttaccatatgccgacgagaggggtcccagaccaacaacaggttaggtcccagaccatactgtgccaggaagcccaggggtcctccccgacaccaccccggcgaatccacatgtctctcggcatcaaggctcccccgattagcaatttactcagccaggggcatcccattccacccatgtggtcgtacttgtcttatgttcggatgaaattccaaggaaacggtccttaagtgcaagagcgggaaaccgtacacccggtacgttccccggtccgcggttttggaaattcatttagttcgcaagcaccgacccaggtgtcgggttttccaagtcttttgtaaacctaagttttacccaagttgtttttcagattttaagtttgaaggcgtccgtcgatactcgcgcaggatgcacggatatcgagacgcaactagatggttacaaggggacatgatataacaattaacaaagggggggatctaatgcagcaaattaggtaagtccgccaatctgccttgcagacgggacaacggattaagtgtgatcctatcagtgcataatatttttcaagcaacataattaaatttcaaatataggctcaagatgttcaaaggtggcttgccttgctcgagatctggagcttgatcctcgaaatcctcgcactgcgggtcttcgggctctgaaactatacgcgaaacggaacaactcaacaaacggcgaaaataaagccctattaatgacctctaagcgtgccattagatagatctcgagatttgaggaattttggaagttgaacggagtcaaacggatttacggttgggaagatattgaatttctaaaattattgaatttttgatctaaaggaaaaggatttaattaaatcctttttggaaaagaaaaagaaaagaagggagggagggaatatagacttttctcggacggctagggcgcggcccaagagaaatggagcggtccggccgagctaaatgggccggccggcccaaggcggcccaaactcgcgcgcgcgcgggagggaggagagagagagccggtggaccgggctcaccacgcgcggtcccgggtgggacccgcttgtcagcggctcggctcaccgtgcggagggagcacgcgacgcacgcgcgcgggcggggaagggacgcggtgcatgcgcgcggtccgcggtggacgcaggtgcggcgggcccacgcgcagcctcacggctcgcggtggatcgcgcgcacgcggagggaccgaccggggtcggcccgacccggtctggctgagctggcgccgacgtggcgcctacgtggctgccacgcgggccggcgggaggtagacgacgacccggccgcgaatggacggcgggcggcggcggcgagcggcggagcgaaccacggcgatacgggcaacagcgagcacaccggacggttgcacgtgacaaggggaggcgagccaacggctcggattcgccggaggttgctcgacggcggcggattgcggcggcggcaaccggcggcgggagaagagggaaacggcgacgaggtcacgagaggtcgattcccggcggtgagagcatctacgcggcttcgggaactcgacgctagcgtcggattgggcggaactacgccgagcgaggccggcgacgagcgggtgctacggagctcgggcggcgacggcggcgagcacacggcgagcgacggcaacggtcggggcggcgccggctaactacggggagtctactcaagctactaccgaaagctagggggaggagatggagcgaggaggaagaacggagagagacactaccgtgcgggacggggcgcagtgacgagaggccgacggcgcgggagtgatctctccggcctcgggccgaggaagaggaagaagagggcgcgcccggagtccccttccgcgtccacgaacgcaccggctctcccggcgcttggcgatggacggcggaggcgaggcagagcacgggagcggcggcaacggtgaggaggcgaatgggagaggaaaggaagggagggggaagacgggtttaaatgggcggcaatgtcggtttgagagaggggaaccgacatgggcggtcaagccgacgagctggcgctccggctagcgtccaaagcggcgacaggaggtgacgccggcgagaggggaaaaaggggagaaaaagaggaaaaggagggagagaaagggggctcgcccctttgccgattcgggaaaaggaggagggagcggggagactcggcagggagagaggggctctctgcctccgccccttggaggctagcgcgcggagtggcgggggccgggcgatgacgacggcgatgacggtgggatggtttggagcggcgcgacgacacgggcgacaggcgcgggctggcgcggcagggggggggtgacggcggcggcgaccaggcggtcggccactcggcacgcgcgcgcgggaagcaacgggcggcgcggctgggcagcgggaccggcgacgcggacggcgcagacaacgcggctcgggcgggaaaccacgcgggcgcgcgcgcgagcaacggcgcgcggggccggctttgcgagcggggagctcgcgcgagaggagggggcgctcggcgcggctctcgcacgcgcgagcagcgagcggggggaaaaacgcgccggggtggggagggagcgagagagagagagagagcgcccgggagagagggggccggggaggagatgggccgagcggaattcggcccatcgaacctgggggaggcaaactagacttttgcggagggattcgatttggaaggatttggattcggaattgaactcgacgatagatcggggattgagatcttgagatggcacggacactagacaacaatcaaagaaacaaatttcgcaattagggtttttcggagataattttcccgctaggcgccacgacggaacgggcgctacactttgccactcacatagtcatatactgccaatgttgtcatcatcaacacacttggtctataaaagcagtgacaaaatcaaagagtagtgccagttaggcacacaactcttttgtgtggctgtgagtagattactggttgccctgccagacgtggcaatctgtctaacctgcgttggttttgcttctcggaatttctatcggcaattcgtagtatctgtgtgaatggtagcatgatatttttcatatcctttggttgcagatgtcgagccagaaggactactcgatggccaccgcggatgttgtggatgctgaggtgagggagctcgtggagaaggcctactcaagagcaacgcagatcatcacgacacacatcgacatcctccacaagcttgctcagcttctgatggagaaggagacggtggacggggaagagttcatgagcctgttcatcgacggtcaggcagagttgtttgtcgcttaattgcgttgtatgttcatccccttgggtgaaatggagaaggcgaatttgtaggaagcacatcaatttaggcgagatgtttttgcatatacttgtatagttcattgtaaagaatggcaaatactgacattgatcaagtaaacagttggtgcttacgattatagcaccgctaactaaacatgattccactgtgctcgctgtacatctgcactgaagacatgtcgcagttgcaggcttgcagctatttcatccgtgtggactttaatatgtttgaatccagat</dnaseqindica> 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| External Link(s) |
