Difference between revisions of "Os06g0229066"
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| − | + | This gene encodes ATP-dependent zinc metalloprotease FTSH 6 (OsFtsH6) in Oryza sativa Chloroplast, homologue of AtFtsH6. It is a predicted gene base on homology comparison. | |
==Annotated Information== | ==Annotated Information== | ||
Revision as of 02:45, 19 May 2014
This gene encodes ATP-dependent zinc metalloprotease FTSH 6 (OsFtsH6) in Oryza sativa Chloroplast, homologue of AtFtsH6. It is a predicted gene base on homology comparison.
Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os06g0229066 |
|---|---|
| Description |
Twin-arginine translocation pathway signal domain containing protein |
| Version |
NM_001187744.1 GI:297724618 GeneID:9268843 |
| Length |
1461 bp |
| Definition |
Oryza sativa Japonica Group Os06g0229066, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:6701957..6703417 |
| Sequence Coding Region |
6701957..6703417 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:6701957..6703417 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:6701957..6703417 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgctgacgacgacgacgagccggctgccgatctgcagggcgcagggcggcggcgtcgccaaggagaagcggacgacgccgccacctgccaagatcacgccgccttcgtcgtcgtcgtcggaggccgccggactaagcaggaggaggctgctgcaatcggccggcctcgggctcggcctcggcctaacggcggcgaggccggcgcgagccgaggcgacggcgccggaggaggtgacgtcgaacaggatgtcctactcccggttcctggagtacctcgacgccggcgccgtcaagaaggtggacttcttcgagaacggcacggtggccgtcgccgaggtggacgacgcggcggcgctgtcgagggtgcaccgcgtcaaggtgcagctcccgggcctccccgccgagctcgtccggaagctccgggacaagggcgtcgacttcgcggcgcacccggtggagcccagcgccggggtgatgctgctcgacctcctcgtcaacttcggcttccctctcctcttcgtcgcctcgctcctgtggcggtcgccgaccatgaacaaccccggcggcgggcctagcctcccgttcgggctcggcaagtccaaggccaagttccagatggagcccaaaaccggcgtcacgttcgacgacgtcgccggcgtggacgaggccaagcaggacttccaggagatcgtccagttcttgaagttcccggagaagttcacggcggtcggtgcgaggacccccaagggcgtgctgctggtcggcccgccggggacggggaagacgctgctggccaaggcgatcgccggcgaggccggcgtgcccttcttctcgctgtccggctccgagttcatcgagatgttcgtcggcgtcggcgcgtcgcgggtgcgcgacctgttcgacagggccaaggcgagcgcgccgtgcctcgtcttcatcgacgagatcgacgccgtggggcggcagcgcggcgcggggatcggcggcgggaacgacgagagggagcagacgctgaaccagctgctcaccgagatggacgggttcggcggcggcgacggcggcgtcgtcgtgatcgccgccaccaaccggccggagatcctcgacgcggcgctgctccggccggggcgcttcgaccggcgggtgtccgtcggcctccccgacgtgcgcggacgggaggagatcctcctcgtgcacggcgccaacaagcggctcgaccccggcgtgtcgctcgccgtggtcgccatgcgcacgccggggttcagcggcgccgacctcgccaacctcatgaacgaggccgccatcctcgccggccgccgcggcaaggaccgcatcaccgtcagcgagatcgacgactccatcgaccgcatcgtcgccggcctcgagggcaccagcatgaccgacggcaagagcaagatgctcgtcgcctaccatgagatcggccacgccgtgtgcgcgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSLTTTTSRLPICRAQGGGVAKEKRTTPPPAKITPPSSSSSEAA GLSRRRLLQSAGLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVD FFENGTVAVAEVDDAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVM LLDLLVNFGFPLLFVASLLWRSPTMNNPGGGPSLPFGLGKSKAKFQMEPKTGVTFDDV AGVDEAKQDFQEIVQFLKFPEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIAGEAGVP FFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVFIDEIDAVGRQRGAGIGGGNDE REQTLNQLLTEMDGFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGR EEILLVHGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRRGKDRITVSEI DDSIDRIVAGLEGTSMTDGKSKMLVAYHEIGHAVCA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1461#atgtcgctgacgacgacgacgagccggctgccgatctgcagggcgcagggcggcggcgtcgccaaggagaagcggacgacgccgccacctgccaagatcacgccgccttcgtcgtcgtcgtcggaggccgccggactaagcaggaggaggctgctgcaatcggccggcctcgggctcggcctcggcctaacggcggcgaggccggcgcgagccgaggcgacggcgccggaggaggtgacgtcgaacaggatgtcctactcccggttcctggagtacctcgacgccggcgccgtcaagaaggtggacttcttcgagaacggcacggtggccgtcgccgaggtggacgacgcggcggcgctgtcgagggtgcaccgcgtcaaggtgcagctcccgggcctccccgccgagctcgtccggaagctccgggacaagggcgtcgacttcgcggcgcacccggtggagcccagcgccggggtgatgctgctcgacctcctcgtcaacttcggcttccctctcctcttcgtcgcctcgctcctgtggcggtcgccgaccatgaacaaccccggcggcgggcctagcctcccgttcgggctcggcaagtccaaggccaagttccagatggagcccaaaaccggcgtcacgttcgacgacgtcgccggcgtggacgaggccaagcaggacttccaggagatcgtccagttcttgaagttcccggagaagttcacggcggtcggtgcgaggacccccaagggcgtgctgctggtcggcccgccggggacggggaagacgctgctggccaaggcgatcgccggcgaggccggcgtgcccttcttctcgctgtccggctccgagttcatcgagatgttcgtcggcgtcggcgcgtcgcgggtgcgcgacctgttcgacagggccaaggcgagcgcgccgtgcctcgtcttcatcgacgagatcgacgccgtggggcggcagcgcggcgcggggatcggcggcgggaacgacgagagggagcagacgctgaaccagctgctcaccgagatggacgggttcggcggcggcgacggcggcgtcgtcgtgatcgccgccaccaaccggccggagatcctcgacgcggcgctgctccggccggggcgcttcgaccggcgggtgtccgtcggcctccccgacgtgcgcggacgggaggagatcctcctcgtgcacggcgccaacaagcggctcgaccccggcgtgtcgctcgccgtggtcgccatgcgcacgccggggttcagcggcgccgacctcgccaacctcatgaacgaggccgccatcctcgccggccgccgcggcaaggaccgcatcaccgtcagcgagatcgacgactccatcgaccgcatcgtcgccggcctcgagggcaccagcatgaccgacggcaagagcaagatgctcgtcgcctaccatgagatcggccacgccgtgtgcgcgtaa</dnaseqindica> |
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