Difference between revisions of "Os02g0649700"
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| − | + | This gene encodes ATP-dependent zinc metalloprotease FTSH 7, chloroplastic, homologue of AtFtsH7. It is a predicted gene base on homology comparison. | |
==Annotated Information== | ==Annotated Information== | ||
Revision as of 03:02, 19 May 2014
This gene encodes ATP-dependent zinc metalloprotease FTSH 7, chloroplastic, homologue of AtFtsH7. It is a predicted gene base on homology comparison.
Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os02g0649700 |
|---|---|
| Description |
Peptidase M41, FtsH extracellular domain containing protein |
| Version |
NM_001054119.1 GI:115447608 GeneID:4330159 |
| Length |
6155 bp |
| Definition |
Oryza sativa Japonica Group Os02g0649700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:27043137..27049291 |
| Sequence Coding Region |
27043333..27044217,27045333..27045398,27045492..27045626,27045737..27045802,27045884..27046069 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:27043137..27049291 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:27043137..27049291 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcctccgcctccgccgccgccgaaaccctcgcggcggcgtcgctccccgtcgcgtcgccttcgcggtcgctgctgcggccgctccccaggagagcgtccgcgggaggcggctgctccgcgtccgtacgaatctccgccgtgccgccgcgggggctcgggttcgcggtcgtccagcgccgcgtcctccgccgcccgccggcggcgcgcgccaacgtcgagcgcgaaggggacggggccgaagcgtccgggccaggagaggcgtcgtcctcctcctctggagatggggaccgcgacggggcggcggcggcggcggaggcaggaggtgatggcgccagcacgagcaccacgagcgcggccgcgacgcctccgcagccgccctcatcgaagaggggggagaacaagtggcggcggaagctgattaagggcggaggcgttgggcggtggctttgggagcccatagttcaggggagggaaatggggttcctcctgctccagcttgggttcgccatattcgcgctccgaatgctgcggcccgagatcgcgctgcctggctcagagccccggccacagacaacgtacgtcagcgtcccatacagcgacttcctggcgagcatagacaagaaccaggtgaagaaggtcgaggtggacggggtgcacatcatgttcaggctccgtcctgaggttgaggcccgtgcaatggagcagccacaggtgcagcgtggaacagattctgttgctgataatgctggagttccaaggcgaattgtcttcacaacaacacgtccagtggacattaagacaccatatgaaaaaatggtggagaatagtgttgagtttgggtcgccggacaaaaggtctggtggcttgctcaattcggctttggtggctcttatttatgttgtattaattgctgtagttctgcagcgattgccaataagcttttctcagcattcagcaggccagctgaggaatcggaagaattcaaactctggtggggccaaagtttcagaaagtaccgatatagttacatttgctgatgtggctggagtagatgaggccaaagaagagctggaagagattgtggagttcctaaggaacccagaaagatatattcgtcttggtgcgcgacctccacgaggtgtcttgttggtgggccttccaggaactggaaagacgcttcttgcaaaagctgtcgcaggggaagctgaagtcccattcataagttgctctgcaagtgaatttgtggagttgtatgtaggcatgggagcagctcgagtgcgtgacctatttgctagagctaaaaaggaatctccttcgattatttttattgatgagattgatgctgtggcaaaaagccgtgatggccgttatcgtatcgtcagtaatgatgagcgagagcagacactaaatcaattactcacggaaatggatggatttgacaccaactcagctgtcattgtacttggagcaacaaaccgagcagatgttttagatcctgccctccgacgccctgggagatttgaccgtgtagttatggttgaagctcccgacagatttggaagagaatctattctgaaagttcatgtgagcagaaaggagcttccgcttggtaaagatgtagatcttagtgacattgctgcaatgacaactggttttactggggcagaccttgcaaatttagtaaatgaagctgctttgttggctgggagatcaaataaagaaatagtggaaaaaattgacttcatctgtgcagtggagcgctctattgctggcattgagaaaaagcatgcaaagctgaagggtaatgaaaaggctgttgttgcacggcatgaagttggtcatgccgttgtgggaactgctgtagcaaacctattgccagggcagccacgtgtggagaaattgagtatattgccaaggtcaggtggtgcattgggctttacatacacccctcccacaacagaagatagatatttgctctttgttgatgaactgcgtggacgtctagtaacacttttgggtggaagggcagcagaggaagtagtactgtcagggcgtgtttctactggagcacttgatgacataaggcgtgccactgacatggcatacaaggctgtagcagagtatggtcttaatcagcgcataggtccgatatcggtggcaacattgtcaaatggtgggctagatgaatccggaggctctccatggggaagggatcagggccatctagttgaccttgtccagcgggaagtaaaagcccttcttcaatcagcccttgatgtcgctctttcagttgtccgtgctaatcctacagttttggaaggccttggagcatatttagaagagaatgaaaaggttgagggcgaggagcttcaagagtggctcaagtcggttgttgcaccaaaagaattgacctcatttataagaggaaagcaagagcaggttcttcagctggaagcaggctcctag</cdnaseq> |
| Protein Sequence |
<aaseq>MASASAAAETLAAASLPVASPSRSLLRPLPRRASAGGGCSASVR ISAVPPRGLGFAVVQRRVLRRPPAARANVEREGDGAEASGPGEASSSSSGDGDRDGAA AAAEAGGDGASTSTTSAAATPPQPPSSKRGENKWRRKLIKGGGVGRWLWEPIVQGREM GFLLLQLGFAIFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASIDKNQVKKVEVDG VHIMFRLRPEVEARAMEQPQVQRGTDSVADNAGVPRRIVFTTTRPVDIKTPYEKMVEN SVEFGSPDKRSGGLLNSALVALIYVVLIAVVLQRLPISFSQHSAGQLRNRKNSNSGGA KVSESTDIVTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLVGLPGTGK TLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFIDEIDAV AKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRF DRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAA LLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVAN LLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVV LSGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQ GHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSV VAPKELTSFIRGKQEQVLQLEAGS</aaseq> |
| Gene Sequence |
<dnaseqindica>197..1081#2197..2262#2356..2490#2601..2666#2748..2933#3009..3095#3217..3330#3406..3530#3607..3715#4530..4655#4743..5063#5378..5501#5637..5761#gccggcctcgcctcggcctctgccttcctcatctctccccctctctctctctctctctctccctcctcctcctcaccccgacccctccccgccgattcctccctcctccacgcgcgcgcggcgcggcgcagcgagcgctctccgattcttccggctccgagggattagggttccgggggggcacgcgtccgctgacatggcctccgcctccgccgccgccgaaaccctcgcggcggcgtcgctccccgtcgcgtcgccttcgcggtcgctgctgcggccgctccccaggagagcgtccgcgggaggcggctgctccgcgtccgtacgaatctccgccgtgccgccgcgggggctcgggttcgcggtcgtccagcgccgcgtcctccgccgcccgccggcggcgcgcgccaacgtcgagcgcgaaggggacggggccgaagcgtccgggccaggagaggcgtcgtcctcctcctctggagatggggaccgcgacggggcggcggcggcggcggaggcaggaggtgatggcgccagcacgagcaccacgagcgcggccgcgacgcctccgcagccgccctcatcgaagaggggggagaacaagtggcggcggaagctgattaagggcggaggcgttgggcggtggctttgggagcccatagttcaggggagggaaatggggttcctcctgctccagcttgggttcgccatattcgcgctccgaatgctgcggcccgagatcgcgctgcctggctcagagccccggccacagacaacgtacgtcagcgtcccatacagcgacttcctggcgagcatagacaagaaccaggtgaagaaggtcgaggtggacggggtgcacatcatgttcaggctccgtcctgaggttgaggcccgtgcaatggagcagccacaggtgcagcgtggaacagattctgttgctgataatgctggagttccaaggcgaattgtcttcacaacaacacgtccagtggacattaagacaccatatgaaaaaatggtggagaatagtgttgagtttgggtcgccggacaaaaggtctggtggcttgctcaattcggctttggtaaggcactacagctgaaaaataaatttgttatacgtgtggtatttttaggctggatatcttagtatagggaaagcaataatcacatcagaacatagatagggaagaatgcagtatagcatgtagaatgatggttattgtaggactggtgtggtgttgagttttgaaatggagagatcaattagttgcagtgacttatgcaaactagttattttgtggcttatagcactatatacagcatacttaccactggccagccatgaaggagaagaaaatgctgtgtgtttaactgtttactattagcatgaaggctcgagatatttgcaactgcgtgagagcatataattcatgttagtttcaacttatggaaaatcagaagcatcattgctcaatttgctaacagaagactcagaaatcacatattccatggtgtttggtgatagttgaaatgatgttttatagacatggtagttcagagttaaaagtttactatatttgtgccctggtcacagataagccgattattacaagaacataaattatagtcagttgcatatcacaaaaaatcctcgcatcaatatgccaaataaatcttcggatatgacctgaaataatggaattatctgaggattcatgtgggtatttctacatgcagttgtaatattacgcagtagattgagtttctaacctgacttcaaatgcaaattgaaagcacaacttttaacattaagactttaaaatcactagtacttttcttcgttattatcatattcccctcgtcccttcatccttgtgaactcttcattcatcaccactgttgtataccttgaatgagaaaacaggatggaatgatttatggattggttcacacgaaaaactgaacttccagttgaatgttggaacttacagatcaatgaattaatggggttttgttaaaacttagtatggcaaaatggaatcctaagtagaaaataggttacagagcataccatttatctgagacagcactgttttgctgtttcattttgttcctaacttcttctttattagaaatatacagctctctctcctagctgcgtttttttgtcctaaccatgcccttattttttttgcaggtggctcttatttatgttgtattaattgctgtagttctgcagcgattgccaataagcttttctcaggtactgatgaatgcacttcattacttcaatcaactaatgaacatactcggttatatctttaatagatataatatagtttcttgtgtatatcagcattcagcaggccagctgaggaatcggaagaattcaaactctggtggggccaaagtttcagaaagtaccgatatagttacatttgctgatgtggctggagtagatgaggccaaagaagagctggaagagattgtggtatgtgttttatgctcaatgttactggtatatgcagttatccactgatattatgccttatctgttgactcgaggggaataagctagttatatcttaatcttatgttcaggagttcctaaggaacccagaaagatatattcgtcttggtgcgcgacctccacgaggtgtcttgttggtcagttctgcagtcatttaagtaatgatgaatgttgctggactagagtttttgtactatgatgtaattcattatttacaggtgggccttccaggaactggaaagacgcttcttgcaaaagctgtcgcaggggaagctgaagtcccattcataagttgctctgcaagtgaatttgtggagttgtatgtaggcatgggagcagctcgagtgcgtgacctatttgctagagctaaaaaggaatctccttcgattatttttattgatgaggtaacctactgtttgaggacaaaaatctagttttatgtgcttaaatgtgtgataactaattgcatttctttgtagattgatgctgtggcaaaaagccgtgatggccgttatcgtatcgtcagtaatgatgagcgagagcagacactaaatcaattactcacggtattgatagtaaagagtcctttaatcttgtgattctgactatattttactcacatacacacatctttagttggggtccaattgaattatcttcgtgttaattttctctgaatctacctaggaaatggatggatttgacaccaactcagctgtcattgtacttggagcaacaaaccgagcagatgttttagatcctgccctccgacgccctgggagatttgaccgtgtagttatggtaaattgatcttctcaataaaaaaaagtgatactggatctctgttgtctgaggtcatagatatttatgtgataggttgaagctcccgacagatttggaagagaatctattctgaaagttcatgtgagcagaaaggagcttccgcttggtaaagatgtagatcttagtgacattgctgcaatgacaactggttttactgggtgagaattcttctgctcctttttaataagcatgcagcattttcagttgatttgacattctttttacactatacagggcagaccttgcaaatttagtaaatgaagctgctttgttggctgggagatcaaataaagaaatagtggaaaaaattgacttcatctgtgcagtggagcgctctattgctgtatgttcctttatctcaaattcgtttgctattattgtttgctaaggtcattttatacaaggaaatttcgtctgcttggtttcttatttctatcctagttttcttaaccgatttacaagaatatgtggaatggcaacttatacaagacaaatatctagatatccattttgaaactattcttgacttgtctctcccaattctgcttttgtagtataggtaataaagctgccagtgcattatgtccactaaatgcgttcggtttcttgcaatgaatttatgtctatttccacccttgctggtagtcaaattttttaaagtttttgaaataccgttcaacttgtgagttttttgatagattttggggccgtttggtagggctccaactcctaaatttaattccaagagttgggtctgaagtggatttgtggagctgcctaaacccagcttcacctctctagttcattttgtgagagcactccagccagctccactccattcattggtggagctgaaactgtttggttgggctccagctctaggagcggtggagtttgagctagagatatgccaaacaggccctttatggattttctttatttgataatggggacgccataaggtcatatatgatgttactgtcctcattcttttcctacatgctgtccattgattcagcactgaaggaatggcccttttgttgatccttgccctagttcaatattgttatggaagatgtatctgttccagctgttagagtagacattgttttacttccacattgtttcctggaaactaactggaattattttcttagggcattgagaaaaagcatgcaaagctgaagggtaatgaaaaggctgttgttgcacggcatgaagttggtcatgccgttgtgggaactgctgtagcaaacctattgccagggcagccacgtgtggaggtttgaacgcaagcaactatcgatagaacagtttaagaaaatgttcgtcttgggcttacattttagtgttgttcttttttccaccagaaattgagtatattgccaaggtcaggtggtgcattgggctttacatacacccctcccacaacagaagatagatatttgctctttgttgatgaactgcgtggacgtctagtaacacttttgggtggaagggcagcagaggaagtagtactgtcagggcgtgtttctactggagcacttgatgacataaggcgtgccactgacatggcatacaaggctgtagcagagtatggtcttaatcagcgcataggtccgatatcggtggcaacattgtcaaatggtgggctagatgaatccggaggctctccatggggaagggatcaggtctgtctcaaaatgtccctactcctttacttgaattttttatttggaatttggacattttcgcgggtacttttttttttaactttttagaaagtcaagttcttttttagaaagattacccgtctttgtccttgcctacgaatcagtccacattttgaacaaattttacgaacagaagctctttttttcatgtttccgtattcctttattaaactatgaatttactcttttggaaaaaaaaaagtctctttgcctgacaaatgcgtaagctaccatctgcatgtattgtgctcacactgcaaaactaatgacagggccatctagttgaccttgtccagcgggaagtaaaagcccttcttcaatcagcccttgatgtcgctctttcagttgtccgtgctaatcctacagttttggaaggccttggagcatatttagaaggtaaaaaactagaccaaattatcaggttgcatatgttattgtggctctcctttctatgatgggttttgcttcattagattaaaaatgaaaactgtttaacctatgcataacggctttcttctctaccccattcagagaatgaaaaggttgagggcgaggagcttcaagagtggctcaagtcggttgttgcaccaaaagaattgacctcatttataagaggaaagcaagagcaggttcttcagctggaagcaggctcctagcactatacattggtctcgtagaatcaattaattaatttaacacaagtagctccaacagtttaaactgtacaagttctgaggtacgcaactcacgcccaagccaagacccttgtgatgctgtatatatctatgtgccgctccacgacccttgactacaggtctaccaggaatgattcatagcgagttgtaaaccccggagtattgtaagttccttcggtttcctcgtttgccgttggatgttgtttatagattaggcgggtggtacacatgtaaaagaatattcgtttttcttctgtgttctttctctttctgttcatcctgcggaaggaattttttgttacattgtcatcttggcaaatattaataggaataattcatatacgtcgttgatcct</dnaseqindica> 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| External Link(s) |
