Difference between revisions of "Os09g0442400"
Chenxuepeng (talk | contribs) (→References) |
|||
| Line 17: | Line 17: | ||
==References== | ==References== | ||
| − | + | Higo, Hiromi, et al. "DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)." Molecular Genetics and Genomics 287.10 (2012): 785-792. | |
==Structured Information== | ==Structured Information== | ||
Revision as of 07:51, 19 May 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Higo, Hiromi, et al. "DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)." Molecular Genetics and Genomics 287.10 (2012): 785-792.
Structured Information
| Gene Name |
Os09g0442400 |
|---|---|
| Description |
contains InterPro domain(s): IPR010989 |
| Version |
NM_001069825.1 GI:115479392 GeneID:4347181 |
| Length |
3626 bp |
| Definition |
Oryza sativa Japonica Group Os09g0442400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:17098053..17101678 |
| Sequence Coding Region |
17099148..17099653,17099732..17100319,17100396..17100522,17100653..17100839,17100947..17101103 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:17098053..17101678 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:17098053..17101678 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggagacacgcagggacgattatcctgttgttgatcttggcctgcctatggctgtgccctgggaggagcagcggcttctcgtggaacattttctcctcgtcgtcgtcgtcttcgccgccgacggccggcgagagccgcgccgccccgatgctggagctggacggcgcggtggccgacttcttgatggacggggccgacgacccgagggcggtgaagctgctggagaacgcgaggagcaagctcgccgggccgagcaactgctggcaggaggcgtaccggaggctgttcgccagctgcggcgacatcatggccgacaaggagatgcagtcgcggctggcgtggcacctcagcagctgcttccaggaggactccggccgccccccgttccctcgctgcggcgaggtctccgacatggtgcactgccgcaagaggctcggcgtctccgaggaccaggtgttcctcgagttcttcctcgagaccaacaccctgtgccaccaattgcaagctgaagcgttcaagcataacacggagaggcttgtcaacgacctgacaaggacatccaagtcagccgaggagaagctggaggtgatcgaggagaggtcagaccagatcatacaagaatcacgcaaagttcaggagacgatctcgtcgatcgaaatgcaggcagatcatctcgcagaggcgtcgaagaatgtcggagaccagatcgacgacgtgctggctcactccaaggccatctttgagcagtccaaggagattgcagactctcaggcaaagctcagagaagggcagaccgagatgagggagacgatcgatgccggcatgacgcatattcaggagtcgtatgagagccttggcaatgggatggataagctgaaggaagaggctgttgatattcagagggagatcaaaactgttggtgattccatgtccaccaagatgcaggatttgcagagcactgcaaatgatattgggagtgtggctggcaaatcattggagaatcagatgcaacttttggatggacagagcaaggccatggacggtctgaataatctgtacagctttcaggcacaagctcttgaggaaagcagggagactgtgcaaaaacttgcacagtttggccagcgtcagcaggaagagttattgtccaggcaggaagaaatccggcaagctcatgaacacctgattcataattcacactcaatactggaagctcaggaagagttcagagcaaagcaggccaacatttttgctgctctggacaaactttacatcctccacaacgccatcttagccgagtcacgtttcatcaaggcgttcttcttctactgctgcatcgtgtttctcatctacatgctcacaagcgcgaagcaaactttcagcatcaggggacatctttactttggcttgtgcatcacgcttctgctcgaaattggcctgatcaagctcggagctgacgacatcgacaagcaattctgggtcatatccaaggtgttccttgtcagatcagtgttccttgcacttgccaccgttcagatgttgcatgccatattcacattcagggattacgaactactcaaccatcacctgctccagacgctggtcgagaaggtccgggcgctggaggaaaccgccgccgccggcgagaagatgctgccctacggcggcggcggcgcggagagcgagaggagcctgatggactactcgtgggtgttcgacgagttggccgacgaggtggacagcaatgcggatccgagctacgccttgccgggggatgagcagcggcaggtggcggtggtcgctcctcgccggaggcactgcgcctcgccggaggaggtcgtcggcgagaactccatcacgacgtcggctggccggaggtacaacctgcggccacggagtagttacaggcagacgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MRRHAGTIILLLILACLWLCPGRSSGFSWNIFSSSSSSSPPTAG ESRAAPMLELDGAVADFLMDGADDPRAVKLLENARSKLAGPSNCWQEAYRRLFASCGD IMADKEMQSRLAWHLSSCFQEDSGRPPFPRCGEVSDMVHCRKRLGVSEDQVFLEFFLE TNTLCHQLQAEAFKHNTERLVNDLTRTSKSAEEKLEVIEERSDQIIQESRKVQETISS IEMQADHLAEASKNVGDQIDDVLAHSKAIFEQSKEIADSQAKLREGQTEMRETIDAGM THIQESYESLGNGMDKLKEEAVDIQREIKTVGDSMSTKMQDLQSTANDIGSVAGKSLE NQMQLLDGQSKAMDGLNNLYSFQAQALEESRETVQKLAQFGQRQQEELLSRQEEIRQA HEHLIHNSHSILEAQEEFRAKQANIFAALDKLYILHNAILAESRFIKAFFFYCCIVFL IYMLTSAKQTFSIRGHLYFGLCITLLLEIGLIKLGADDIDKQFWVISKVFLVRSVFLA LATVQMLHAIFTFRDYELLNHHLLQTLVEKVRALEETAAAGEKMLPYGGGGAESERSL MDYSWVFDELADEVDSNADPSYALPGDEQRQVAVVAPRRRHCASPEEVVGENSITTSA GRRYNLRPRSSYRQT</aaseq> |
| Gene Sequence |
<dnaseqindica>1096..1601#1680..2267#2344..2470#2601..2787#2895..3051#3157..3511#ttcgcctcccgtcgcgctccgtcgccttcaacctctgccaacgtcaggcgatccggtgagtaagttcttcctccatttttttcctctgctcttgcctctcttttccgaatcaaaatacagcgagatttctttcttctctctgaacttcaccggtgcaacaaaattgaaccatcgttgtaggttcgttcgttctgaacttttcagaatttcgcggtatatgttcagtgttcatgtcagtaaagatagcccgcaaggtataggagaggagaatttgattggccctctgtcactggcatggtgggccaagcgcttgcgcctcttggagtagtatcttgtggtgtaagccagtgcatgcaaccgacttaaattagcaccgacttgatttgtcattaactgatcaagatcttccttgctgggaacggaacatagaaacggcaagagatctgtgccccaccattcaacttggcatccaagtagctttccacacttccattggtgtaaccgtgtaagataactagcacattccaaatgtaaaccgccattactaatatcaagttcagtgctgttcaccgtgtgtttgcgtgcgtgtcgctgtcattttcggtgtcaaaagttctaaacatttggtttagtttagggtgattctctcttaatcttcccctgcatgtgatgtgacaggctcatctggatctctctggcttgccggctaaggaacaccgggtgctatttatcagggagcccttcacaccgcaggggaaagttgcagctattttgtcactgccccttgttgcatcttgctccggcgatttgatttagaattttaggttgttactggcttcgattaatcatattttagtctgaacaaatttgcaagttaattcctattctgttcaattcggtgattcaattcgattggggtctttgggtttaagaatttcagaatgttattaacacggggcgtaacaatctgcatcaaatgaataggctttaattcttgccttcttgattgttccttcctggcaggaactgcaattaacccgtgattttactcaccaagatcgcttcttgcccggtgcaaagttcaccgatttcaccatgaggagacacgcagggacgattatcctgttgttgatcttggcctgcctatggctgtgccctgggaggagcagcggcttctcgtggaacattttctcctcgtcgtcgtcgtcttcgccgccgacggccggcgagagccgcgccgccccgatgctggagctggacggcgcggtggccgacttcttgatggacggggccgacgacccgagggcggtgaagctgctggagaacgcgaggagcaagctcgccgggccgagcaactgctggcaggaggcgtaccggaggctgttcgccagctgcggcgacatcatggccgacaaggagatgcagtcgcggctggcgtggcacctcagcagctgcttccaggaggactccggccgccccccgttccctcgctgcggcgaggtctccgacatggtgcactgccgcaagaggctcggcgtctccgaggaccaggtgttcctcgagttcttcctcgagaccaacaccctgtgccaccaattgcagtaagtgcaattctcccattttcagtttgcaattcacttctgcttcttgaatttttcatgttttgttgatttgtgtagagctgaagcgttcaagcataacacggagaggcttgtcaacgacctgacaaggacatccaagtcagccgaggagaagctggaggtgatcgaggagaggtcagaccagatcatacaagaatcacgcaaagttcaggagacgatctcgtcgatcgaaatgcaggcagatcatctcgcagaggcgtcgaagaatgtcggagaccagatcgacgacgtgctggctcactccaaggccatctttgagcagtccaaggagattgcagactctcaggcaaagctcagagaagggcagaccgagatgagggagacgatcgatgccggcatgacgcatattcaggagtcgtatgagagccttggcaatgggatggataagctgaaggaagaggctgttgatattcagagggagatcaaaactgttggtgattccatgtccaccaagatgcaggatttgcagagcactgcaaatgatattgggagtgtggctggcaaatcattggagaatcagatgcaacttttggatggacagagcaaggccatggacggtctgaataatctgtacagctttcaggcacaagctcttgaggaaagcaggtattttaacttctcgcttccattattctttttttatttcattgtaaaatatactgattttgactggaattttcagggagactgtgcaaaaacttgcacagtttggccagcgtcagcaggaagagttattgtccaggcaggaagaaatccggcaagctcatgaacacctgattcataattcacactcaatactggaagctcaggttattgtctcctcctgcatatcagaatacgagaatagttttccttttgtttgactgcttaaccatgatcaatcagtaggcataggattgacttctttttcaactgatcttttttccttttgtcctgcaggaagagttcagagcaaagcaggccaacatttttgctgctctggacaaactttacatcctccacaacgccatcttagccgagtcacgtttcatcaaggcgttcttcttctactgctgcatcgtgtttctcatctacatgctcacaagcgcgaagcaaactttcagcatcaggggacatctttactttggtaaaaaaaaaaacatctcaggatatttcacatactattagcagttactacctgtatttacaccttgtaaaatgctcaattgctattgctttttactctcctggcaggcttgtgcatcacgcttctgctcgaaattggcctgatcaagctcggagctgacgacatcgacaagcaattctgggtcatatccaaggtgttccttgtcagatcagtgttccttgcacttgccaccgttcagatgttgcatgccatattcacattcaggtaaccaccaaatccagtccatgttcatcacgatcagatctttgcatgcattcgtgattcatctcaatctcctggtaattaattagcctgtaaacttttcttcagggattacgaactactcaaccatcacctgctccagacgctggtcgagaaggtccgggcgctggaggaaaccgccgccgccggcgagaagatgctgccctacggcggcggcggcgcggagagcgagaggagcctgatggactactcgtgggtgttcgacgagttggccgacgaggtggacagcaatgcggatccgagctacgccttgccgggggatgagcagcggcaggtggcggtggtcgctcctcgccggaggcactgcgcctcgccggaggaggtcgtcggcgagaactccatcacgacgtcggctggccggaggtacaacctgcggccacggagtagttacaggcagacgtgagtttggttggagaattaactggagatcgctttgtgcgcgtaatactgtgaacgttgttgtttctgggtttccagtgtgagtttggtttgggagaggtaaagtcgtcgtgtaccgt</dnaseqindica> |
| External Link(s) |
