Difference between revisions of "Os08g0433500"

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===Function===
 
===Function===
 
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===Expression===
 
===Expression===
 
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Revision as of 11:50, 22 May 2014

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Annotated Information

Function

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Expression

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Evolution

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Labs working on this gene

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References

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Structured Information

Gene Name

Os08g0433500

Description

No apical meristem (NAM) protein domain containing protein

Version

NM_001188667.1 GI:297726464 GeneID:9266817

Length

1975 bp

Definition

Oryza sativa Japonica Group Os08g0433500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21113948..21115922

Sequence Coding Region

21113948..21114463,21115284..21115612,21115763..21115922

Expression

GEO Profiles:Os08g0433500

Genome Context

<gbrowseImage1> name=NC_008401:21113948..21115922 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21113948..21115922 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaggagcagcggttgccggcggggttccggttcttccccaccgacgaggagctcgtcacctactacctcgccaggaaggccatggacgccaccttcacctccgccgccatccgcgacgtcgacctctacacctccgatccatggcacctcccatgcgactcgtcggcggcgagcaccggaggcggcggcggcggcgagtgctacttcttctgcagacggagcagcaagtacccgtccggcgcgcgcgtccgccgcgcgacggccggcggctactggaagtcgacggggaaggacaagggcgtgtacgctgccggcggcggcggcgggctcgtggggacgaagaagacgctggtgttctacgaagggagggcgccgcgaggggagaagacgagctgggtgatgcacgagtactctagagcaccgagcaccaacttcatcagaggagctcaggcacgtacacataatcttctcgatattatctacagcgagtgggtgatctgcagggtgttcaagaagcagcctccaattgaacactggctggaaatggaggaggtggagacgacgacgacgacgacgacagtgcaggagcacacgccaaaccggcgccgtctccctccggcggaggctgcggcggcgccgccgccgccgtccggtcagccgtggcaacacacgagtcgccggtccggcgatggccgtgctgccatcgatggtggcaaccgtgaggaggaggaggatgaacatggcctggctcgagaggagtcgtcgtctccggtggtcatcagctcaccatcacgctgcacctcctcaccgtcgtctcggcttctcaaccatgagcaccttggtgcttcgtcgtcagatgacctgccggagttgatggagttcggcgacatctacggcgggatcgccgccggtggcccgacggaccagcaggcctcatcatcaaactcaaattccatttgcaactttctcgacgagccatactactgctggaacttctga</cdnaseq>

Protein Sequence

<aaseq>MEEEQRLPAGFRFFPTDEELVTYYLARKAMDATFTSAAIRDVDL YTSDPWHLPCDSSAASTGGGGGGECYFFCRRSSKYPSGARVRRATAGGYWKSTGKDKG VYAAGGGGGLVGTKKTLVFYEGRAPRGEKTSWVMHEYSRAPSTNFIRGAQARTHNLLD IIYSEWVICRVFKKQPPIEHWLEMEEVETTTTTTTVQEHTPNRRRLPPAEAAAAPPPP SGQPWQHTSRRSGDGRAAIDGGNREEEEDEHGLAREESSSPVVISSPSRCTSSPSSRL LNHEHLGASSSDDLPELMEFGDIYGGIAAGGPTDQQASSSNSNSICNFLDEPYYCWNF </aaseq>

Gene Sequence

<dnaseqindica>1460..1975#311..639#1..160#atggaagaggagcagcggttgccggcggggttccggttcttccccaccgacgaggagctcgtcacctactacctcgccaggaaggccatggacgccaccttcacctccgccgccatccgcgacgtcgacctctacacctccgatccatggcacctcccatgtatgccctagctctagctgatcatgatcatgtgatggtgtctagctcgttgagagagagagagagaatttgacagttaattctcgatcgattgatggagatgatgaccatatatatgcgtgacgtgttttgcgattaactaatgcacaggcgactcgtcggcggcgagcaccggaggcggcggcggcggcgagtgctacttcttctgcagacggagcagcaagtacccgtccggcgcgcgcgtccgccgcgcgacggccggcggctactggaagtcgacggggaaggacaagggcgtgtacgctgccggcggcggcggcgggctcgtggggacgaagaagacgctggtgttctacgaagggagggcgccgcgaggggagaagacgagctgggtgatgcacgagtactctagagcaccgagcaccaacttcatcagaggagctcaggcacgtacacataatcttctcgatattatctacgtatgattaattagcttcccttaatcctcatggctcatgcacgaagatgctgtgatacagttcaagttttcaagattcactacttctaagttctaactgtactggtgatattcttctactattggtacgttggtgatcctaagcagtgagttggtcgtgtctgggctccattgatttatcagaatacttgtatatatataaaaaaaagcgtaaatacattaggaatttcaaagatgtcgacacaattggtttccaaaaataatgggtagaatagagtacatatatatcgtgtcgattttgtgcaactcttaatttgtactccctccgtattttaatgtatgacaccgttgactttttaatcaacgttttaccactcgtctcattcaaattttttatgcaaatataaaagtacttatgtcatacttaaagaacatttgatgataaatgaagtcacgataaaataaattataattacataattttttttaataagacgaaaggtcaaacgtttgttaaaaagtcaaagacgtcatacattgaaatacggaggtattaccttacaattcattctaatttatacctttcaactccatcgccaactttatctaattttccttgataacacatgtaaaaagaaataatcgatcgctagcaaacgctctttgtcatcagggctcaacgatgccgctggcttcgatcgccacttgttcgtagtcattgatttaggatggttgtatctcagcaatagaaagtgctcctacggggatcagacgttgatcgatgttcttgacgtgttttcattaatgtttcctcggtgcagagcgagtgggtgatctgcagggtgttcaagaagcagcctccaattgaacactggctggaaatggaggaggtggagacgacgacgacgacgacgacagtgcaggagcacacgccaaaccggcgccgtctccctccggcggaggctgcggcggcgccgccgccgccgtccggtcagccgtggcaacacacgagtcgccggtccggcgatggccgtgctgccatcgatggtggcaaccgtgaggaggaggaggatgaacatggcctggctcgagaggagtcgtcgtctccggtggtcatcagctcaccatcacgctgcacctcctcaccgtcgtctcggcttctcaaccatgagcaccttggtgcttcgtcgtcagatgacctgccggagttgatggagttcggcgacatctacggcgggatcgccgccggtggcccgacggaccagcaggcctcatcatcaaactcaaattccatttgcaactttctcgacgagccatactactgctggaacttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0433500, RefSeq:Os08g0433500