Difference between revisions of "Os02g0313400"
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APOPTOSIS INHIBITOR5 (API5), which encodes a putative homolog of antiapoptosis protein Api5 in animals, results in delayed degeneration of the tapetum due to inhibition of the tapetal PCD process leading to defects in formation of male gametophytes.Os API5 is a nuclear protein that interacts with two DEAD-box ATP-dependent RNA helicases, API5-INTERACTING PROTEIN1 (AIP1) and AIP2 which is directly regulates the expression of CP1. summing up, the API5 is required for normal expression of CP1 and that AIP1/2 directly regulates the expression of CP1, which might regulate tapetum degeneration during pollen development. | APOPTOSIS INHIBITOR5 (API5), which encodes a putative homolog of antiapoptosis protein Api5 in animals, results in delayed degeneration of the tapetum due to inhibition of the tapetal PCD process leading to defects in formation of male gametophytes.Os API5 is a nuclear protein that interacts with two DEAD-box ATP-dependent RNA helicases, API5-INTERACTING PROTEIN1 (AIP1) and AIP2 which is directly regulates the expression of CP1. summing up, the API5 is required for normal expression of CP1 and that AIP1/2 directly regulates the expression of CP1, which might regulate tapetum degeneration during pollen development. | ||
| + | |||
| + | ===mutantion=== | ||
| + | Please input mutantion information here. | ||
===Expression=== | ===Expression=== | ||
Revision as of 15:31, 22 May 2014
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Contents
Annotated Information
Function
Please input function information here. APOPTOSIS INHIBITOR5 (API5), which encodes a putative homolog of antiapoptosis protein Api5 in animals, results in delayed degeneration of the tapetum due to inhibition of the tapetal PCD process leading to defects in formation of male gametophytes.Os API5 is a nuclear protein that interacts with two DEAD-box ATP-dependent RNA helicases, API5-INTERACTING PROTEIN1 (AIP1) and AIP2 which is directly regulates the expression of CP1. summing up, the API5 is required for normal expression of CP1 and that AIP1/2 directly regulates the expression of CP1, which might regulate tapetum degeneration during pollen development.
mutantion
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Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os02g0313400 |
|---|---|
| Description |
Apoptosis inhibitory 5 family protein |
| Version |
NM_001053191.1 GI:115445752 GeneID:4329135 |
| Length |
4125 bp |
| Definition |
Oryza sativa Japonica Group Os02g0313400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:12400052..12404176 |
| Sequence Coding Region |
12400053..12400106,12400553..12400663,12400817..12400903,12400987..12401093,12402041..12402155 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:12400052..12404176 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:12400052..12404176 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>agcagcaagttcctcaactatttcgttaagcaaattgttccagtttttgacaagattcctgaagagaagaaactggatttgctcaaaacagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccctgttgttcaattgctcaagaaatatatgcctgggaagaaggtggaagatatcaaccataattatgttgagtgcctgatgtacatttttcaccatttagcccataagacaccaaacaccacaaacagcctatgtggttacaagattgttactggacaaccatcggatagacttggagaggatttctcagaacattacaaagactttacggagaggttaactggaacagaagagacagttcgagcagtctcaaagagactaactcaggggatggcagattttaacaaggcaatatcttcagcaaagactgaagaagagaaaactaaaattaaatctgatcagcagaaatcaacaatgacaatgagggcctacaacaacatactagcaatggcgcagccgttgcgtgcgaaatcccctttatttattggtgacaagaaaatcactctctcatggatggagcagccaaagaaaccagcacctacaacaacaggagggaagaggtcccagcctgctacaaatgggaacacccctgcgagcaagaaggggcggggagagggagcagcccggaatcaacttgtgaacagagcttttgaagggttatcccgtggtggtagagggagtggaagaggccggggcaggggaggccggggaagaggatggggctaccgctga</cdnaseq> |
| Protein Sequence |
<aaseq>SSKFLNYFVKQIVPVFDKIPEEKKLDLLKTVAASSPYATAQDAR QLLPPVVQLLKKYMPGKKVEDINHNYVECLMYIFHHLAHKTPNTTNSLCGYKIVTGQP SDRLGEDFSEHYKDFTERLTGTEETVRAVSKRLTQGMADFNKAISSAKTEEEKTKIKS DQQKSTMTMRAYNNILAMAQPLRAKSPLFIGDKKITLSWMEQPKKPAPTTTGGKRSQP ATNGNTPASKKGRGEGAARNQLVNRAFEGLSRGGRGSGRGRGRGGRGRGWGYR</aaseq> |
| Gene Sequence |
<dnaseqindica>2..55#502..612#766..852#936..1042#1990..2104#2321..2386#3370..3464#3549..3729#gagcagcaagttcctcaactatttcgttaagcaaattgttccagtttttgacaaggtaatcttctttatcttgtacattggtccctgtgctttgttggaaaaaacagtaaatgcttctttttaattatattatgcatggcagctctacaacccttgttttgttgtcatacataatgtaacattttgcagtttgcacaccattttttttttgaaacatttggttacattccttacttgtgataaagaaacagctcttgcaatcatgcacatttctgcattctgcactaacattgcatggtaaaaaaaagtctgtcgtatttttttgtaactatggatattctaattgaattgccatcattttggcaatcagactccccaccatgccttgaacttgtttatcttcaaaacaaagtgaattcgcatcttagagcatgaaggttttctagagcatgaaggttttctagagcattaaggttttcccctcttttttacctgttttagattcctgaagagaagaaactggatttgctcaaaacagttgctgcaagctcaccatatgctacagcacaagatgcacggcagctgcttccccctgttgttcaattgctcaaggtctgtgcaattcctgtctgataggtgtccaatccccctttgttaatgttttattttgtcccctagaagacattgttagatggtttcccctccaccgcggtgttacacaataaatgtcgtgtcttaccattgcatttacgttttcttttacagaaatatatgcctgggaagaaggtggaagatatcaaccataattatgttgagtgcctgatgtacatttttcaccatttagcccataaggtttgatgacagaatgtttatcatctattatgaaccatgtcttttcttcatggatggccttgtgctgaccaaatgaaatacagacaccaaacaccacaaacagcctatgtggttacaagattgttactggacaaccatcggatagacttggagaggatttctcagaacattacaaagactttacggagaggtaggttgcattttccttatgatttctttgaactatttttatttgtgtgcattcctttaagaaccacagcttagacaatggttattttttaaattagttccaccaaatcattagttatcatacattggggcagttgcagtagtaccatgactaccacgtgcttaagtggacaaaaaaaatctagcactagggtgaaggaatccatcttgtctgagtatgatcctgaggtaaggggtaattgacatgtaaaaaatgagtgatgccatgacgctagtatctgggtcacatctattgttaaatcttagaataaaataataggttgtactagaagatttgaccaaaggtacattgtaaatggatgatctgtagtaattttatataaatatggacatatagataattgaagaataattggaatttggaagtgatttgcatgattgttaaggcatcgctgtagtgctagggtgtgccaaggggtcagggcgtaagggcttaacgccataacccagagagagagagagagagatgtgaggtttccactctcttcttccccctgtgccactatcaagattctacctaggattgaatcagatcaattattctatggttgttcgactagtagacttgtattaagattttaacaaacatgatgcttggcttggcggtttccgttgatgaggaaaatagacaatttgttataactctcttaattggccgtcattcgctatgtgtggcaacattatcttacacaaattttgttctcccatagcttgcgaaacatcttttacgccatattctggtgtggtaatctaatataaatcataaatcgtttttctataaattatgataaaattcctttcaattttttaatatggtgtgagagcgtatggtattttgttttggtgatctgttttatttgctagtttcttactgctgcacgtgcacaggttaactggaacagaagagacagttcgagcagtctcaaagagactaactcaggggatggcagattttaacaaggcaatatcttcagcaaagactgaagaagagaaaactaaaattgtgagtttttaggtgctttgcataaattttctatgttcctccttccgtgttggatcagcactattgttagctgacttatccttgtctcagaatcttgtaacatcatattctacaagattgtttccaagttctttgtttggcaattagattgatactatgactttaaaaacaattacaacaactgatcatcgtttggatatgatgttcttttggcagaaatctgatcagcagaaatcaacaatgacaatgagggcctacaacaacatactagcaatggcgcaggtgatttctttattactttagtggaactgtgtgatatgtgaattgcaaaatgctatcgcatgtgagaataatgtggtgacacatatgagggtatttttgaaatcacaagaagcttccaaatgctctctgcttgggcttctcatggtggaccagttacaattttaaatgtataacaaaagaactattgaaaatactagcaaatagcagtgggagtttttttttcgttacagatctgcttttgagcatagtaccgaaatctgaccactgttagtcaagaccaaaaaaaaaactgtgaccagggcccggtctggtttggattaatagaaacaatgatagtgagaaaaactgggatgtttaaactttctggtacattttaattccgcttggagtcgaatcccttttacctgaggttatattgcatgtgtaggatgtgctgataagcaactgtgttgagattggcatgtgatttatttaaggaagttttcaatatgagcctttattttaatacaggcttggggtttaattcaaaattaatactctgaactgtctggctcactgtcaaaccatgtttgaatcagcgaaccgaggactgatttgagtgaatagttcacatgctggtttgagttttgcactatgcttttgaggcctgtgaaggaactgcaggactatcttaagtaaaagttaagtggccttttataattgcatgtacacaaccgaattcaactttggctaccaatctctacgaattaccttagatatatgaaaatgacgagtaggttgtgtcaaaaaattccattgtagttgtattaatttgtacaatggaaaagttgcatgtgttaatgtctaaaacacatcttattctactgctggaggaagcataagtacacggcaatgtatgaaatatactgcttgtgtatactaataatactaacctacctaaatgtttatgctttctaactaaacgtgatgaatgttcatttcagccgttgcgtgcgaaatcccctttatttattggtgacaagaaaatcactctctcatggatggagcagccaaagaaaccagcacctacaacaacagggttagatttctattacctaatattccatttccccctcagactttgcatttcattatagttaagtctgctttgtggatcttttagagggaagaggtcccagcctgctacaaatgggaacacccctgcgagcaagaaggggcggggagagggagcagcccggaatcaacttgtgaacagagcttttgaagggttatcccgtggtggtagagggagtggaagaggccggggcaggggaggccggggaagaggatggggctaccgctgagaatagttggaaatccctgcaatctgatgggagaatagatcagctttctgctttgatttgaggtacttctcaggagataagcttttctgtatgcagcaaaatgggattggtgatagcccgtgaaggcatgctcaattgctgaatgcatacagaaagctcatatgatggatgcttgagtatatcgatgattttttagaccctagtcgtggaggttcaagaatgtggagtgtatgtacgccctagttcatttacatccctgaccgtttgttagttgaccagttctacttgttttggtggttcgatgaactcaagcagaacttttaaattctagaatttgttgttaaagactatttatttaagaatcaatagattgccgaggtgaattatgtttattgc</dnaseqindica> |
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