Difference between revisions of "Os06g0100266"
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==Annotated Information== | ==Annotated Information== | ||
| + | The rice bacterial leaf streak (BLS)which has seriously constrained the rice production in humid tropical and subtropical areas of Asia and Africa.When rice is infected by the BLS pathogen, leaves become yellow or even blasted, the rate of unfilled grains will increase, and the grain weight will decrease. In recent years, some QTLs for BLS resistance have been mapped on rice genome using molecular markers. | ||
===Function=== | ===Function=== | ||
Please input function information here. | Please input function information here. | ||
Revision as of 05:22, 24 May 2014
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Annotated Information
The rice bacterial leaf streak (BLS)which has seriously constrained the rice production in humid tropical and subtropical areas of Asia and Africa.When rice is infected by the BLS pathogen, leaves become yellow or even blasted, the rate of unfilled grains will increase, and the grain weight will decrease. In recent years, some QTLs for BLS resistance have been mapped on rice genome using molecular markers.
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0100266 |
|---|---|
| Description |
Hypothetical protein |
| Version |
NM_001187627.1 GI:297724384 GeneID:9267053 |
| Length |
7113 bp |
| Definition |
Oryza sativa Japonica Group Os06g0100266, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:33130..40242 |
| Sequence Coding Region |
33130..33135,33283..33362,33749..33907,40200..40242 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:33130..40242 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:33130..40242 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaagggcccaaagccagctcgtctgctctgggtgctgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcacagccgctcgcgaagtacacactggagttgtgtgtgtctacgccgccgccggtggccgctgcggccatgaaggagtgtgtgcttgatgagtacgccaccaagcacaggatctccatcgataggtttctccagcttaggatatttgtcaaggtgcatgatcggcggcgcgtcggggcttccctgacttccagcactcctttctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MEGPKASSSALGAVICSCIQPEQRRFAAQPLAKYTLELCVSTPP PVAAAAMKECVLDEYATKHRISIDRFLQLRIFVKVHDRRRVGASLTSSTPF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..6#154..233#620..778#7071..7113#atggaagttttttttactactgtgttctgttgtctgaaatgaaaataatgcatggagaatgcttttgtcctctgaaaatgaaaatgctagctgctgaaatgtgacattcagtcagtctctgaactctgaagagccatgattgtgcaatttcaggggcccaaagccagctcgtctgctctgggtgctgtaatctgctcatgtatccagccggagcaacgtcggtttgctgcacagttcgtagtaccgtgaccgctgtgcctgctcccgatatgcacatcattcactcaggtttacatctcaacgttttttttgcaactaatgtggcatctgaaaattgagtttctttgcatctaaattttagagtagtttagaaatttatattgtatcctctctgttttatttacaaaaatgagtagtttttggtttttagagcagaaatctagctgcaatgttcacaaaaatgtaaagagagattaaaggggaacacaaccaacttccgggatccgcaacagcacgcgcgttgcgatgattgtgcctgcagtcaggtccctaatccgccgaccttagctatgtgattcatttttgtgttgctgtcatcagtgtttcacttgttctgtaggccgctcgcgaagtacacactggagttgtgtgtgtctacgccgccgccggtggccgctgcggccatgaaggagtgtgtgcttgatgagtacgccaccaagcacaggatctccatcgataggtttctccagcttaggatatttgtcaaggtgcatgatcggtaaggcctcatccatctccactagacgttgagcttcaagtgcgagcagacttgccactttcctgtattagatcagtagccgatgaatatgataatttcaactaagaaagttcgattgccgatctttatttatgtctttggcacaatgggggacatcctgatctatcatcataaatgctaactcactgaaattttggcacagctacttagtgacagcaaatttgatcttaatgcaatatgtcacccaaataatcttccaaaggttaccttgttcactaattgggagatgatttactgtatctttttcaatggaatagatgatttattgtatcataataacatctaatggttatttgcactctctcagggcttaaagtcactgcatacgtgaggtgctcgagcagtaggaatctgcatctaccatggatgatgttgctacataaacaaaacaatataattgctggtattattttcaacttttggtccttttgactctattaaattctttatccattactgtttctcgatagtttgttgtgaatgttgcctgcacattcaaatgatatgtgggattagtttccagtcactgaagtgcaaaccttagctagatctcttctgatgcagaaatctcactttttgtctgggtgaattctacacatttcagaccagaaaaatcttggtacaagtcttaatacaagccatttagttatcagcatatatattcactgtgtggtagctatactctaaaaaatattcaaagaaagtaggggtgcagtggttatgccgctgtttaataatctgctgaaggaaatagcaacattgcaaagaggtgcaaacggtgctacttgatgctgaaacctgagtaccagtcattttaattgtagctgtttgcagcaaagttttcgctaaatgtagtgcataaacttaatttatttttgccgcttgaaacttatatatacacaggcaactgtttttttttttcatttccaaaggcttccatccgtattaaccttgtttttttattaaagtattaaatttttggttagcagtattttgttatgtgttttagatttaatgcttctagaatatttctctatatgtattcatgttctatgaaaatgctatcttttggtgttccatgcaaagaggtatatatgtgaactgaatgttgcggttatttaaatattcacaatttgcacactcatgatctatttcagaaacttaaaaccaagtacccaatagttttgacaaatgaacactattttgtttgcacagaataaaaaatgtgatgatgctgttgggttgttattaaattgactaattgttttagcccttggtcccatccaaaaaaactggctttgcaagccaacacattcagtggttaacgagtagcatatttttatatataatgatattactaaatgtttgagagttttactttcatatatgtgccttacttatttatatatttcaggagtcttcttaaggattagattattgtcgttgaaaaaccatccactatagctgctacctctactcactttggcacaccatctaaaaatgcagagaagcaggttaatttatagtgggtgagcttaatccactgtagaaagcagaatatgaatgcaacaggctgcctgctatgattgatgctcatttattcagagattatcatttagcattctggtacttgatgagaagttataggtatccttctactttttttagtgaggcgatctaatttgaattttctcattcaatttgaggtttgtgacctgatttaagcccaacttttttctctttcaattctcatcatgtatgcctgcctggcatgtggttggcaatgtaagaaaatgttggatgtggttcatgtggcatgcaacaggccttggcctaagtgatgtctagcaggcagagcagataagattggttcagagatgttatttttcttccaccatcctttaattttcttctatttctttcttgaagtggatagaaccaattacttcatattataggtttatcttgcattgccctctccattcagttatctttaattcagttgtgtttcgaggcgtgctacagctcctgccttgtgggtttaattaggaatggaaatttcttactgatgcaggtttggtctcttctgtgcatggggtcaaccccaggatggtgatctgcatctatggcttccccaccaatgtcgctgccatctaggtacgaatcaattcagtccaatcatctcctctagcatctgttcttgatataggaaaaaaaagtatttttttggtagatcatgttatgtgatagtcgtccatgacctgttctacttccttcctcagcatttactgttgtaggtttccacattcactaggtttccatactcttaacacgcaagaagtagagcccaaggtttcttatatattttgcctgttctacaagaggattgagatgtttagtgtaatcctttgtgactcatggacaaaaccatgtaggtccttgttgatatatatggtgatccagaactccttgttgcatatggtattgttttttcttttcctttgtgcacacttagtttgtgaggcagttgattttgaccttcctttccatagaaaaaatatttccttttatgttgttttaaattccatgtgctaactcagatttattgtgattagttgttgttgtgctaatcttcaaatgtttagtatattttgtgcattttgatgctctattgctctgcaaaccatggcttttgaatgcactattttggttggacaggtaaatgtgttgtaggactattttagctaggattcataaactttgcactacacatcgctgctggtttttgtcctaaatagggacagttatttaggacataatttgaagattgaatttttctgctatttgaatcacaattgagttgctggtgataaatgttatccaaggcttgagtgctcgacactatttattatttcattctttttctgatattcctctagcaatttgcattaaaaagtttctgatatttctcaaaatgtacataaaataatctttagtcaaatcatgaattcgttgacgtgtgattggttatattgtacgaaacaatgctctctagcagtcatgcaaggtgttcaatacatgtgtcttggatattgaaactagattccatggtttacatctcaatttttttgccgcaccacatgagttaacctctttgcagcttgctgcatataatttacttgccacgattaattacccatacagcttaccacgaactaggggaataacctcattatggaaaatcaagacaactttcttaatgttgtatcttgatgtgcattcttttgaatctaggcttatttttatgcagttaaatttatgatttatactcctccaagttccatcagcccgctttgtataatattatgctttagatgggattagaggcctttcaaaggcagaaagagaaattatgctcctccagttggcctaggcttcaactctgggtttttatttctattgctggtcattcatacacaagatttcatgagcccacagttcaccttttggtcctacctcatttatcagcataggcgatagtagttgatgattatataccatttcccagactattccgaaagagcctaatgttggggatatttcaaggatgctaattgttgtaatgggtgcaagccatgttattaatgggtcatgaggaattagtctctgaccaaagtatctaaaaaatgctaagaaagaccaatttgtggtgctacttgatcccaagaaacaaggtgtacaggaagggaatgtgaaatcggtttctcactttttatggtagtcagtatctaaatcttacagtagaaaccaccttgaccgtgctgaaatggcatgagttattgaggctgctggtagaacacttgaaactttgcctcatttttgctgcttgatcttcatttcagccaattgcttgttagctatttagcttcatgttgcgattcatgttttgagcagcatttgtaaaatcatttatttaagaaagtggccatggacaagctcttttagatattgctaccttactatctttgggagagaaaaatgttgaatgaacattactagccatgatttggcaagaggccttcagattacgtgactattttgtattgatttgtac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