Difference between revisions of "Os10g0580800"

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===Function===
 
===Function===
 
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===Expression===
 
===Expression===

Revision as of 02:42, 27 May 2014

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Annotated Information

Function

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Expression

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Evolution

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Labs working on this gene

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References

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Structured Information

Gene Name

Os10g0580800

Description

Similar to NClpP4 (Fragment)

Version

NM_001072048.1 GI:115483691 GeneID:4349523

Length

2040 bp

Definition

Oryza sativa Japonica Group Os10g0580800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23645435..23647474

Sequence Coding Region

23645448..23645845,23646761..23647244

Expression

GEO Profiles:Os10g0580800

Genome Context

<gbrowseImage1> name=NC_008403:23645435..23647474 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23645435..23647474 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggctgcgagtgcgagtgccactgcctccctctccgcggcggcggcggtggcggtggcggcggccgctctccgccccacgcagcagcgacgcctgcgcgttgtcgcgccaccgcgccccctcaggctcaccagtctcaacccccctcgcgcggcttccgccccctctactcctctgtgggaggccggcgtccgagctgagtcgtccgactcgcccggagccggagccgggggtgacgtcatgggcctcctcctccgggagcgcatcgtcttcctcggcaacgagatagaggacttcctcgccgacgcagtcgtcagccagctcctcctcctcgacgccgtcgaccccaactctgacatccgcctcttcgtcaactcccctgggggatcactcagcgcaacaatggccatctatgatgtaatgcagctcgtgagggcagatgtttccactattggattgggcatagctggttccactgcttctataatccttggtggtggcacaaagggcaagcgattcgccatgcccaacaccaggataatgatccatcagcccgttggaggcgcaagtgggcaggccttggatgtcgaggtccaggccaaggagatattgactaacaagaggaatgtcatccggcttatatcaggtttcacaggacgcactccggagcaggttgagaaagacattgatagagacagatatatgggtcctcttgaggctgttgattacgggctcatcgacagtgtaatcgacggagacagtatcatcccacttgagcctgtcccggagagggtgaagccgaaatacaactacgaggaactgtacaaggatccacagaagttccttacacctgatgtcccagatgatgagatatactag</cdnaseq>

Protein Sequence

<aaseq>MSAASASATASLSAAAAVAVAAAALRPTQQRRLRVVAPPRPLRL TSLNPPRAASAPSTPLWEAGVRAESSDSPGAGAGGDVMGLLLRERIVFLGNEIEDFLA DAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAGST ASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEVQAKEILTNKRNVIRLISGF TGRTPEQVEKDIDRDRYMGPLEAVDYGLIDSVIDGDSIIPLEPVPERVKPKYNYEELY KDPQKFLTPDVPDDEIY</aaseq>

Gene Sequence

<dnaseqindica>14..411#1327..1810#ataattgcgagcgatgtcggctgcgagtgcgagtgccactgcctccctctccgcggcggcggcggtggcggtggcggcggccgctctccgccccacgcagcagcgacgcctgcgcgttgtcgcgccaccgcgccccctcaggctcaccagtctcaacccccctcgcgcggcttccgccccctctactcctctgtgggaggccggcgtccgagctgagtcgtccgactcgcccggagccggagccgggggtgacgtcatgggcctcctcctccgggagcgcatcgtcttcctcggcaacgagatagaggacttcctcgccgacgcagtcgtcagccagctcctcctcctcgacgccgtcgaccccaactctgacatccgcctcttcgtcaactcccctgggggatcactcaggtcgcgcatcctaaatttatttctccttttgctttgaattgctttaaccttggagcacgaaattaattaagcgcattaggaatcatacaagtatgctacttatagggtagttattttctgataacgcaaattgtgggtaaaagacaagtcttgagctacttactatatgatgaataacatcaatcagactatatccttttcttttttccctttgtaaataaacagtccttccaggttccagttataatgaatatcagagctcctgctatgaatcttatggatcaaccaaccatttgttttgaattgatagtgtatttgctcccctcgtcctaaaatataagggatttttggtggacgtgactgtccagattcatagtcttaggatgtgtcacatgcacacaaaatctcttatattttgggacggagggagtagattctaaatcaacaacactatttgatccgatagaggctatcccacacaccacaagaaagaaagagatgggctgatgaggcaatattatgtgaatgtaaaccttgcttccttcctttctgtaaaaagatcttgccgcagttcggagttggtaatgatgtttttggcattttataaatgatgcacgtcctgttcagagtgatgcttaattttatgtttcccttgcaggatattgcctttttttttgtttattaagttagtgtaggaatgccttctctttgttttgtttgcaatgtaccttaatagcactggtacaagattgattatgtattgcaatacaagtaggagatactagttcatcaaccaagagcaagtagctgtaggcaggtcattacgttaaatagctcttgggttcttggcagtctggtaaatctgttgatgcaaatatctttgtgttttctgactgattcctgcttctctctcagcgcaacaatggccatctatgatgtaatgcagctcgtgagggcagatgtttccactattggattgggcatagctggttccactgcttctataatccttggtggtggcacaaagggcaagcgattcgccatgcccaacaccaggataatgatccatcagcccgttggaggcgcaagtgggcaggccttggatgtcgaggtccaggccaaggagatattgactaacaagaggaatgtcatccggcttatatcaggtttcacaggacgcactccggagcaggttgagaaagacattgatagagacagatatatgggtcctcttgaggctgttgattacgggctcatcgacagtgtaatcgacggagacagtatcatcccacttgagcctgtcccggagagggtgaagccgaaatacaactacgaggaactgtacaaggatccacagaagttccttacacctgatgtcccagatgatgagatatactaggtaatgagcctgcctgcctgtcgtttgcatttcgcacggcaagggggctgcttgcaatcaaagacgatgctcctagtcctagcactagttgatttttcctgtcacatgttaaccaactagtgccatattacgattgttgagcacgcagttagacttattggttgtgtttgtcgttgaaattgcatgcgtttggtgtgcgaatgtggatggattgatgaggtggtttgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580800, RefSeq:Os10g0580800