Difference between revisions of "OsCEBiP"

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(References)
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==References==
 
==References==
 
<references>
 
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* <ref>
 
Takeo Shimizu, Takuto Nakano, Daisuke Takamizawa, et al.Two LysM receptor molecules, CEBiP and OsCERK1, cooperatively regulate chitin elicitor signaling in rice.
 
Takeo Shimizu, Takuto Nakano, Daisuke Takamizawa, et al.Two LysM receptor molecules, CEBiP and OsCERK1, cooperatively regulate chitin elicitor signaling in rice.
 
The Plant Journal, 2010, 64(2): 204-214.
 
The Plant Journal, 2010, 64(2): 204-214.
 
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</ref>
 
</references>
 
</references>
  

Revision as of 08:35, 27 May 2014

Annotated Information

Function

OsCEBiP is a glycoprotein of rice consisting of 328 aa and has two lysin motifs (LysM) in the extracellular portion. OsCEBiP RNAi results in a significant
 reduction in the elicitor-induced oxidative burst and gene responses, indicating  that  OsCEBiP contributes to the perception  of chitin. OsCEBiP lacks an

intracelluar kinase domain, so it has to work with annother protein to transduce extracelluar signal into cell. Its partner is OsCERK1.

Localization

OsCEBiP is localized at the plasma membrane of rice, together with OsCERK1.


Evolution

OsCEBiP is a homologous gene to CEBiP, which is discovered in Arabidopsis.


Labs working on this gene

  • Department of Life Sciences, Faculty of Agriculture, Meiji University, 1-1-1 Higashi-Mita, Tama-ku, Kawasaki, Kanagawa 214-8571, Japan
  • Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
  • Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan

References

Cite error: <ref> tag defined in <references> has group attribute "" which does not appear in prior text.

Structured information

Gene Name

OsCEBiP

Description

LysM receptor-like kinase

Version

AB510402.1 GI:299507947

Length

1818 bp

Definition

Oryza sativa Japonica Group LysM RLK mRNA for LysM receptor-like kinase, complete cds.

Source

Oryza sativa Japonica Group

Chromosome

Chromosome 9

Location

{{{AP}}}

Sequence Coding Region

{{{CDS}}}

Expression

GEO Profiles:OsCEBiP

Genome Context

{{{GCID}}}

Gene Structure

{{{GSID}}}

Coding Sequence

<cdnaseq>ATGTTCTCTCTCCCCGCCCTCCTCATCGGCGCCTGTGCCTTCGCGGCGGCGGCGGTTGCGGCGTCCGGCG ACGGTTGCCGCGCCGGCTGCTCGCTGGCCATCGCCGCCTACTACTTCTCCGAGGGTTCAAACCTCACCTT CATCGCCACCATCTTCGCCATCGGCGGCGGCGGCTACCAAGCGCTGCTCCCCTACAACCCGGCCATCACC AACCCGGACTACGTCGTCACCGGCGACCGCGTGCTCGTTCCCTTCCCCTGCTCCTGCCTCGGGCTCCCCG CCGCGCCCGCCTCCACCTTCCTCGCAGGCGCCATCCCCTACCCGCTCCCCCTCCCCCGCGGCGGCGGCGA CACCTACGACGCCGTCGCCGCCAACTACGCCGACCTCACCACCGCCGCGTGGCTGGAGGCCACCAACGCG TACCCGCCGGGGAGGATCCCCGGCGGCGATGGGAGGGTCAACGTCACCATCAACTGCTCATGCGGCGACG AGAGGGTCTCGCCGCGGTACGGGCTGTTCCTCACCTACCCGCTCTGGGACGGGGAGACGCTCGAATCGGT GGCCGCGCAGTACGGGTTCTCGTCGCCGGCGGAGATGGAGCTGATCAGGAGGTACAACCCCGGGATGGGA GGGGTCTCCGGGAAGGGGATTGTGTTCATCCCGGTGAAAGATCCAAATGGAAGTTACCACCCTCTGAAAT CAGGTGGAATGGGGAATAGCCTTTCTGGAGGAGCGATAGCAGGAATTGTGATAGCTTGCATTGCTATTTT CATTGTGGCCATATGGTTGATTATCATGTTCTATAGGTGGCAAAAGTTCAGGAAGGCCACATCGCGTCCA TCTCCAGAAGAAACCAGCCACCTTGATGATGCTTCCCAAGCTGAAGGCATTAAGGTTGAGAGATCCATAG AATTCTCATATGAAGAGATTTTTAATGCAACACAGGGATTTTCTATGGAACATAAAATTGGGCAAGGTGG TTTTGGTTCAGTGTATTATGCTGAGCTTAGAGGCGAGAAAACTGCCATAAAGAAAATGGGCATGCAAGCA ACTCAAGAATTCCTTGCTGAACTGAAGGTCTTGACACATGTTCACCACTTGAATCTGGTGCGCCTGATTG GTTATTGTGTTGAGAATTGCTTATTTCTTGTCTATGAATTTATTGACAATGGAAACCTAAGTCAGCATCT CCAAAGGACTGGTTATGCGCCTCTCTCATGGGCTACCAGAGTGCAAATTGCCCTAGACTCAGCACGTGGT CTTGAGTACCTTCATGAACATGTTGTTCCAGTATATGTTCATAGGGATATCAAGTCTGCAAATATCCTAT TAGACAAGGACTTCCGGGCAAAGATTGCTGATTTTGGACTAGCAAAACTTACAGAAGTTGGAAGTATGTC GCAGTCACTGTCAACACGAGTTGCTGGTACATTTGGTTACATGCCTCCAGAAGCTCGATATGGTGAGGTT TCTCCTAAGGTGGATGTCTATGCTTTTGGTGTCGTCCTTTATGAACTTCTTTCAGCCAAACAAGCTATTG TGAGATCAAGTGAATCTGTTAGCGAATCAAAAGGACTGGTTTTCCTGTTTGAGGAGGCCCTCAGCGCTCC AAACCCCACGGAAGCTCTTGACGAACTGATTGATCCGAGCCTGCAAGGGGACTACCCCGTCGACTCGGCT CTCAAGATTGCGTCCCTTGCAAAGTCCTGCACGCATGAGGAGCCCGGGATGAGGCCTACCATGAGATCCG TCGTCGTTGCCCTGATGGCGCTCACAGCCAACACCGATCTTCGCGACATGGACTACCACCCTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MFSLPALLIGACAFAAAAVAASGDGCRAGCSLAIAAYYFSEGSNLTFIATIFAIGGGGYQALLPYNPAITNPDYVVTGDRVLVPFPCSCLGLPAAPASTFLA GAIPYPLPLPRGGGDTYDAVAANYADLTTAAWLEATNAYPPGRIPGGDGRVNVTINCSCGDERVSPRYGLFLTYPLWDGETLESVAAQYGFSSPAEMELIRRYNPGMGGVSGKGIV FIPVKDPNGSYHPLKSGGMGNSLSGGAIAGIVIACIAIFIVAIWLIIMFYRWQKFRKATSRPSPEETSHLDDASQAEGIKVERSIEFSYEEIFNATQGFSMEHKIGQGGFGSVYYA ELRGEKTAIKKMGMQATQEFLAELKVLTHVHHLNLVRLIGYCVENCLFLVYEFIDNGNLSQHLQRTGYAPLSWATRVQIALDSARGLEYLHEHVVPVYVHRDIKSANILLDKDFRA KIADFGLAKLTEVGSMSQSLSTRVAGTFGYMPPEARYGEVSPKVDVYAFGVVLYELLSAKQAIVRSSESVSESKGLVFLFEEALSAPNPTEALDELIDPSLQGDYPVDSALKIASL AKSCTHEEPGMRPTMRSVVVALMALTANTDLRDMDYHPF</aaseq>

Gene Sequence

{{{DNA}}}

External Link(s)

NCBI Gene:OsCEBiP, {{{Link}}}