Difference between revisions of "Os01g0117400"
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| − | + | Thia gene originates from the rice cultivar Nipponbare, and encodes a hypothetical protein containing a protein kinase-like domain. | |
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | This gene encodes a Lr-10 like protein, and the protein belong to the proein kinase family. the protein sequence is homologous with the gene 0s01g011760[[http://ricewiki.big.ac.cn/index.php/Os01g0117600]]. The detailed information about its function, expression and evolution can be saw in http://ricewiki.big.ac.cn/index.php/Os01g0117600[[http://ricewiki.big.ac.cn/index.php/Os01g0117600]]. | |
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==Labs working on this gene== | ==Labs working on this gene== | ||
Revision as of 12:16, 28 May 2014
Thia gene originates from the rice cultivar Nipponbare, and encodes a hypothetical protein containing a protein kinase-like domain.
Contents
Annotated Information
Function
This gene encodes a Lr-10 like protein, and the protein belong to the proein kinase family. the protein sequence is homologous with the gene 0s01g011760[[1]]. The detailed information about its function, expression and evolution can be saw in http://ricewiki.big.ac.cn/index.php/Os01g0117600[[2]].
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0117400 |
|---|---|
| Description |
Protein kinase-like domain containing protein |
| Version |
NM_001048386.2 GI:297595975 GeneID:4326068 |
| Length |
2251 bp |
| Definition |
Oryza sativa Japonica Group Os01g0117400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:983510..985760 |
| Sequence Coding Region |
983510..984648,984753..984922,985012..985760 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:983510..985760 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:983510..985760 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgaaatctctacttgtctcttctttgcttgcggttgttgcagcagtagttgttggagcagggccaaacccccagtactgtcctccttcctcctgtggccatcttggcaacatatcctaccctttccgtcttcaaggcgattcgcgcgattgcgttgctactcctcgtccatggtacaacctctcctgtagcagcggcagggctgccattcagatcaacacagggacgtactacgtgagtagcatcaactatactggtgaggtcttctcggttgtggatgctaccttgcaggatgatgatacaaacagcagctgccctcttcctcgctccgatcacctccctttcccggattggtatcgtgactatcgtccagctgattcttatggttttttcgatttggccactgcttcaggcacttgggcatgctttgtgaattgttcccgagcaataacagatattatgccatggtacaagcccgttacatgtctgcttcccaacaattcatttgtttttgtctcgtttgttaactgtgccgttggagagcttcaaccttcctgtcgatatttggccatgattccctttgagagtcggcatatatcggacaactcctcacagctacagaatgcaagttacacagatatcataggattcataaggaaaggatttagtgttcggtttccatatcgtcctgaccagtaccagagtcctcgtatgagcgccagggaatgcctgaaggattcaaacaggtacttcaaggagcgtatatctcatccaagcattctgaatttaacccgtgctattttctggagcgaaacaaactccgaagtagactgcggatatgaagttgccccccaaaaagataggatttttttgggaaccatagtatcggctattgatatcatcaaatttcatttcgttttattcaggttagtgttggggtcactggtggtattcatcttccttgcccacaagtactggaaaacaaggatcacgatcgacgcagtagagaagttccttcgaatgcagcagatgattggtccgacgaggtttgcctacacagacattattgcaatcacatcccattttcgagacaagctaggccagggaggctatggctctgtatataaaggtgtactgctcccgggtaatgtccatatcgctgtcaagatgctgactggtagctccagctgcaacggagatgagttcatcagtgaggtctcaaccattggaaggattcaccatgtcaatgtggtgcgtctggtcgggttttgctctgaagaaatgaggagggcacttgtgtacgagtacatgcctcgaggctctcttgacaagtacatcttctcgtcagagaagagtttctcctgggataagctgaatgagatcgctttgggcattgcaagagggatcaactacctgcatcagggctgcgagatgcagattctgcactttgacattaaacctcacaacatccttcttgacgataactttgtcccaaaggttgctgatttcggtcttgcgaagctatacccaagggataagagcttcgtccctgtgagcgctgcacgaggaaccgtgggctacatagctcccgagatgatctctcggagcttcggtgtcatatcaagcaaatccgatgtttatagcttcggaatgctactattggagatggctggaggaagaaggaatgcagatccaaatgcagcaaactcaagtcaagcttattatccatcacgggtgtacagggagctgactcggcgagaaacaagcgagatctctgacattgctgatatgcatgaactagagaagaagctttgcattgttggattgtggtgcattcagatgaggtcatgtgatcgaccgacgatgagcgaggtgatagagatgcttgaaggtggtaccgatgaactgcaagttcctccaaggccattcttctgtgatgatgagcaattgcctggagtggagtcttacaatatgccatctgatctaactgcaatctccgaggagcatgaggatgacgatgatgatagcatatgtctgttcgaaagctaccagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAKSLLVSSLLAVVAAVVVGAGPNPQYCPPSSCGHLGNISYPFR LQGDSRDCVATPRPWYNLSCSSGRAAIQINTGTYYVSSINYTGEVFSVVDATLQDDDT NSSCPLPRSDHLPFPDWYRDYRPADSYGFFDLATASGTWACFVNCSRAITDIMPWYKP VTCLLPNNSFVFVSFVNCAVGELQPSCRYLAMIPFESRHISDNSSQLQNASYTDIIGF IRKGFSVRFPYRPDQYQSPRMSARECLKDSNRYFKERISHPSILNLTRAIFWSETNSE VDCGYEVAPQKDRIFLGTIVSAIDIIKFHFVLFRLVLGSLVVFIFLAHKYWKTRITID AVEKFLRMQQMIGPTRFAYTDIIAITSHFRDKLGQGGYGSVYKGVLLPGNVHIAVKML TGSSSCNGDEFISEVSTIGRIHHVNVVRLVGFCSEEMRRALVYEYMPRGSLDKYIFSS EKSFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDDNFVPKVADFGLAK LYPRDKSFVPVSAARGTVGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNADP NAANSSQAYYPSRVYRELTRRETSEISDIADMHELEKKLCIVGLWCIQMRSCDRPTMS EVIEMLEGGTDELQVPPRPFFCDDEQLPGVESYNMPSDLTAISEEHEDDDDDSICLFE SYQ</aaseq> |
| Gene Sequence |
<dnaseqindica>1113..2251#839..1008#1..749#atggcgaaatctctacttgtctcttctttgcttgcggttgttgcagcagtagttgttggagcagggccaaacccccagtactgtcctccttcctcctgtggccatcttggcaacatatcctaccctttccgtcttcaaggcgattcgcgcgattgcgttgctactcctcgtccatggtacaacctctcctgtagcagcggcagggctgccattcagatcaacacagggacgtactacgtgagtagcatcaactatactggtgaggtcttctcggttgtggatgctaccttgcaggatgatgatacaaacagcagctgccctcttcctcgctccgatcacctccctttcccggattggtatcgtgactatcgtccagctgattcttatggttttttcgatttggccactgcttcaggcacttgggcatgctttgtgaattgttcccgagcaataacagatattatgccatggtacaagcccgttacatgtctgcttcccaacaattcatttgtttttgtctcgtttgttaactgtgccgttggagagcttcaaccttcctgtcgatatttggccatgattccctttgagagtcggcatatatcggacaactcctcacagctacagaatgcaagttacacagatatcataggattcataaggaaaggatttagtgttcggtttccatatcgtcctgaccagtaccagagtcctcgtatgagcgccagggaatgcctgaaggattcaaacaggttttttttcctcatgattctgtctatataaaaaagacgtgttcccttctcacttattaccccgtcttgtacaacggtgtgatttgcaggtacttcaaggagcgtatatctcatccaagcattctgaatttaacccgtgctattttctggagcgaaacaaactccgaagtagactgcggatatgaagttgccccccaaaaagataggatttttttgggaaccatagtatcggctattgatatcatcaaatttcatttcggtacgtacgaattacttgcttttaatcatcccatccgtgatattatgcgcgtctgaacatatatattctaacttatatacatgcatgttggtttgtttgagaagttttattcaggttagtgttggggtcactggtggtattcatcttccttgcccacaagtactggaaaacaaggatcacgatcgacgcagtagagaagttccttcgaatgcagcagatgattggtccgacgaggtttgcctacacagacattattgcaatcacatcccattttcgagacaagctaggccagggaggctatggctctgtatataaaggtgtactgctcccgggtaatgtccatatcgctgtcaagatgctgactggtagctccagctgcaacggagatgagttcatcagtgaggtctcaaccattggaaggattcaccatgtcaatgtggtgcgtctggtcgggttttgctctgaagaaatgaggagggcacttgtgtacgagtacatgcctcgaggctctcttgacaagtacatcttctcgtcagagaagagtttctcctgggataagctgaatgagatcgctttgggcattgcaagagggatcaactacctgcatcagggctgcgagatgcagattctgcactttgacattaaacctcacaacatccttcttgacgataactttgtcccaaaggttgctgatttcggtcttgcgaagctatacccaagggataagagcttcgtccctgtgagcgctgcacgaggaaccgtgggctacatagctcccgagatgatctctcggagcttcggtgtcatatcaagcaaatccgatgtttatagcttcggaatgctactattggagatggctggaggaagaaggaatgcagatccaaatgcagcaaactcaagtcaagcttattatccatcacgggtgtacagggagctgactcggcgagaaacaagcgagatctctgacattgctgatatgcatgaactagagaagaagctttgcattgttggattgtggtgcattcagatgaggtcatgtgatcgaccgacgatgagcgaggtgatagagatgcttgaaggtggtaccgatgaactgcaagttcctccaaggccattcttctgtgatgatgagcaattgcctggagtggagtcttacaatatgccatctgatctaactgcaatctccgaggagcatgaggatgacgatgatgatagcatatgtctgttcgaaagctaccagtaa</dnaseqindica> |
| External Link(s) |
