Difference between revisions of "Os07g0211500"

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(Created page with "Please input one-sentence summary here. ===characteristic=== ===Function=== ===Expression=== ===Nucleotide Polymorphisms=== ===Allele Distribution=== ===Haplotype Dive...")
 
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==Structured Information==
 
==Structured Information==
 +
{{JaponicaGene|
 +
GeneName = Os07g0211500|
 +
Description = Pericarp Color and red grain color gene
 +
Length = 833bp|
 +
Definition = Oryza sativa (japonica cultivar-group) cultivar H75 brown pericarp
 +
            and seed coat (Rc) gene, complete cds.|
 +
Source = Oryza sativa Japonica Group (Japanese rice)
 +
 +
  ORGANISM  Oryza sativa Japonica Group
 +
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 +
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 +
            clade; Ehrhartoideae; Oryzeae; Oryza.|
 +
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 +
source=RiceChromosome07
 +
preset=GeneLocation
 +
</gbrowseImage1>|
 +
GSID = <gbrowseImage2>
 +
source=RiceChromosome07
 +
preset=GeneLocation
 +
</gbrowseImage2>|
 +
                    /translation="MAGGEAHAALQAVAQSLRWTYSLLWQLCPHQGSSLVWGEGHYNG
 +
                    AVKTRKSTVMQPPPAEEEDDADHAARHRSRQLRELYDWLQQAGENSSGGVQTSSTTAS
 +
                    RRPGAALSPEDLTETEWFFLMSASYSFPPGIGLPGRAFARRGHVWLTGANEVDSKVFL
 +
                    RAILAKTVVCIPVVDGVLEIGTTEKVEEDMGLIQYARGIFMDQHGIHMKPTLSQHSTS
 +
                    NPVTHCTHQHPIQVQMQLGITSQTKFDYSDELNADEENDDTEEEGMSGSDTNNTDTER
 +
                    NSGQLQLQMQDQLNMVSNDHQTIPNNAVSSELMQCEMSEVVRDGCSNNILEDEIQMLM
 +
                    DCQNSNCQLNLQGPDEPCHSWHFLCEELQNDYQPATEDQVASPENTHYPKTLMTILHY
 +
                    NTLRQQEMNIKNYLPVSEKSSFSRWTTPEGSDDNKTMISPGTTQRMLKSILMIVPSSH
 +
                    CSYRGAETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPF
 +
                    MTKMDKASILGDTIEYVKQLRNRIQELESSSSSSRAAARAPSAAAAGRRRKRSAAAAT
 +
                    ATAAEGMSSSNGRNGGEAAEVVQVSIIESDALLELRCGCGGGGGGVVLLRVMQAMQEL
 +
                    QLEVTAVQASCAGGELLAELRAKVVVMILICMKMQMQMQMQN"</aaseq>|
 +
1 atggccggcg gcgaggcgca tgcggcgctg caggcggtgg cgcagagcct ccggtggacc
 +
      61 tacagcctcc tctggcagct ctgcccccac caagggtacc taccctacct acctacgaca
 +
      121 cgatgcacag tgttcatcca tggccggcca tggcggatcg tcgtcgttgt cgatgatcat
 +
      181 cgaaggaagc tagaggatat ggctcaatac tttgataata tatatactga tctctccgta
 +
      241 caacaaaaat ataaaaattc tagctagtat cgaatgagac atatgctatg ctagtactac
 +
      301 gaatctaaaa agatgtacat attttgattc gtattattag gatatatcac gagtttttat
 +
      361 attttgagac ggatgtaata attctgaatt tagttgtgat ccatggcatg caggagctcg
 +
      421 ctggtgtggg gggaggggca ctacaacggc gccgtcaaga cgcggaagtc gacggtgatg
 +
      481 cagccgccgc cggcggagga ggaggacgac gccgaccacg cggcgcgcca ccggagccgg
 +
      541 cagctgaggg agctctacga ctggctgcag caggccgggg agaactccag cggcggcgtg
 +
      601 cagacgtcgt cgacgacggc gagccggcgg ccgggggcgg ctctgtcgcc ggaggacctg
 +
      661 acggagacgg agtggttctt cctcatgtcg gcatcctact ccttccctcc cggcatcggg
 +
      721 tatataataa aaaatataga tataaatatt taagcatgca tgcataaatt aaaccacact
 +
      781 tcttgttacg tgttcttggc aaaatgatga acaattacca ctaattaatt ggagccagaa
 +
      841 accctaaaga tttacccacc tggttaatta atcggtgtgt tgatccacgc atgcatgcat
 +
      901 gcagaaaatc aagatcagga tagctccttt tcttttgcag gttaattagc tagatcttca
 +
      961 cgtataatta gctagctaga ttttaaaata taatttattc aatttgattt atgattttta
 +
    1021 ttttttattt caaatagata caactgtata caaaatttta ttttggtaca tacctccgat
 +
    1081 ccaactacat cagaggtaaa aaaaaaatta aaccgttgga attgattaga acaagatcgt
 +
    1141 gcggtcaaat tatatcataa ctaacttttc tgattctcta aagcatagag atgtatatat
 +
    1201 acatcgtatt attaggctct atatttcctg attaacacta gatgcatata taattttgat
 +
    1261 agtcaaaata tacttttgat aggctctaaa gaaaaactta ataacatgta ctccctccat
 +
    1321 atacttttga tagtcatatt tcatcttgac acacagatca agtataagta attctactta
 +
    1381 tcatccattt aaacacgcta ctagttattc ctcataaaca agcgattcat taatatttac
 +
    1441 atttctcgat gcttgtgtag ccaatattgt gtggaagaat ggaatgtcat taagaggata
 +
    1501 ggttgttgga ttgaaatatg cctatcaaaa ataaattttt agatttgaaa atatgcctat
 +
    1561 caaaagtaga tggagggagt attaattaat gtgaatttcc aatcctactg ttgtgatatt
 +
    1621 aggctttgta ccttcttgtc caggaggtat atatatggct cttttaagga tgggagaaaa
 +
    1681 tatcatcttt aatacaacta tatatggctt ttgtttgata aatacaactt ttattttgta
 +
    1741 tgaatacaaa tatattgata aatatccacc attataatcc taacccatta ggatcatatg
 +
    1801 gtgtatattt ttttaactat ttgtttttta taaattaata ttaagagatc acaataaaaa
 +
    1861 tatagtatta tgaaagtact cttaacaaca tatccaatga taaaattatt attattacaa
 +
    1921 aatatagtgg tcaaattgta tagaattcaa tagcctgatt ttatgacgtc aagtaaatta
 +
    1981 aataaagaat gaaggtagtg ctagagtgat caaacaatat ctctcctaaa atatgtccta
 +
    2041 taagttttac tccataaatc caagggtcaa aagttgttgg gttatttttt tagataataa
 +
    2101 catactaccc cttttcaaaa tgtatgattc tattgacttt ttgcacaaca tttaaccatt
 +
    2161 tgtcatatta aaaattagta taaacatcta aaaatataag ttacaattat attttatttg
 +
    2221 atgataaaac aactcacaac aaaataaata atatttatat aatctttttg gaataaaacg
 +
    2281 aatgatcaaa cattattcaa aaagtcaatg gtatagtacg ttttgaaatt gatagactat
 +
    2341 gagagcaaaa ttttgagata acatggaaaa ttatcctctt agacattgca ctgtgtaata
 +
    2401 attaataata atgaatgaaa ggctaagact tttcttccac cttatataag tggttgaata
 +
    2461 tatagcaatc acatcattac atgattttgt aaccaaccgt ctctatagct ccgatacagt
 +
    2521 gctagtttca catcgtaata attaaagagt ataataataa atcgaggtgt acttctcatc
 +
    2581 gatgaagtga tgtgccgctt agctaaatta aactcgtatg cgaaaaatca gtatatgtcc
 +
    2641 ggttaatttc taagagagag attgagagag aataattgcg cccctccaaa tccccctctt
 +
    2701 ggacgttagg gagctatata gacggtattg ctaagtgcga tgtgtacata acgtacctgt
 +
    2761 cgtaggaaca tttctcatcc aaattaagta gtaatgcatg gcatgaaatc catttttgta
 +
    2821 ttttgcatgg caaagaatga caacaaggaa tacactagct agccctgccc tttttcaatt
 +
    2881 taatttaaca tcaaacttag ttattgtatt tcttttgtca gaatagcatg cattgcatac
 +
    2941 tctttaaaaa taattaatta gtgtatttta ctagtcttac aaaagtatca agagagacaa
 +
    3001 ctaattatag ttgggagaca ccaaacttgt ttttaataat gacaattaaa accctacctc
 +
    3061 tacatccaac atagacgtac atagtccgaa ggcgccaaat atttgtacat ttagctacca
 +
    3121 gatttcagta cgagttctca cattataatt ttgatttttt tatttttttt ataaacaatc
 +
    3181 tggtaccctt ttatgtctgg aaggaaaaaa aaaatctaaa ttgcaacatt ttagtcggtg
 +
    3241 agaatggtac tctgtcctag ctactttcta cacatgagag agagagagag agagagagag
 +
    3301 agagccttta attgcccttg cccatgcatc tttctttgca cacatgtatg cttttcacat
 +
    3361 tgtcatgagg agagaacttg ttaagttgca cacatgtgtg ctttgcatgt cttcaggtta
 +
    3421 cctggaaggg catttgcaag gagaggccat gtatggctca ctggagcaaa tgaagttgac
 +
    3481 agcaaagtat tcctaagagc aattcttgcc aaggttcagc catcaccttc tcttacctat
 +
    3541 ttttcactct gaatgccaac agtgctttgc acattgtagt ctgtttgcag actgcaaatg
 +
    3601 atgaccataa tcagatcaga aaataaaata atattatata ctttttgagc cagctagcaa
 +
    3661 gaatatgtaa caataattct cctttttttt tcttgttctt ttccctgatg tggtgcataa
 +
    3721 caaataacca aactgatgaa tggcagagtg ctggtatcca ggtatttgcc tctaaaagta
 +
    3781 gctacacgtt tactatgaaa ttttgtggct tttgttcatc tttggatgca gtggccatta
 +
    3841 tctaaaaact atgaatttcc agactgcagt ttttatctaa ttttgtgact ttgtacatca
 +
    3901 gacagttgtg tgcattcctg ttgtcgatgg cgtcctggaa attggaacta cggaaaaggt
 +
    3961 gatttcgtat attatcagct gacaatctaa ttatatgggc catataatta agtataaatc
 +
    4021 aaaatacctc ataatatatt ataaagtatc taatgtgatt atgtgaatat tggctatttc
 +
    4081 aatgtaattt gatatatgaa actgataatc ctctgaaact ccgtaaggat caaactaatc
 +
    4141 aaaatgtata tattttcaag gtggaggaag atatgggcct gattcagtat gcaaggggca
 +
    4201 tcttcatgga tcaacatggc atccacatga agcctaccct ctcacagcac tcaacatcca
 +
    4261 acccagtcac ccactgtact catcagcatc caatccaggt tcagatgcaa ctaggtatca
 +
    4321 ccagccaaac aaagtttgat tattcagatg agctcaatgc agatgaggag aatgatgaca
 +
    4381 cagaagaaga gggcatgtca ggttcagaca ctaacaacac tgacactgaa aggaattcag
 +
    4441 gccagctgca acttcaaatg caagaccaac tgaacatggt gagcaatgac caccagacaa
 +
    4501 taccaaataa tgcagtttcc agtgagctaa tgcagtgtga gatgtcagaa gtggtaagag
 +
    4561 atggctgctc aaataatatt ttagaggatg aaatccaaat gctgatggat tgccaaaaca
 +
    4621 gtaattgtca gttaaatttg caagggccag atgagccttg tcactcttgg cattttctct
 +
    4681 gcgaggagtt acaaaatgat taccagccag gtattacatt tgagaagata atccttcaaa
 +
    4741 agcacccttg ttccaaaaat atatatttgt actcttcaca caagcactgc catttttttt
 +
    4801 cttttttgca tacatcctca attcttgcat ttcttttcca tatatttgat acaactgtct
 +
    4861 ccatttccct tctgtcacag ctactgaaga tcaagtggca tcacctgaaa atacccatta
 +
    4921 cccaaaaaca ctcatgacaa tcctacatta caacacgctg cgacagcaag agatgaacat
 +
    4981 caagaactac ttgccagttt cagagaaatc atcattctcc agatggacta ctcctgaagg
 +
    5041 aagtgatgac aacaagacca tgatcagtcc aggcaccaca cagagaatgc tcaagagcat
 +
    5101 cctgatgatt gttcccagta gtcactgcag ttacagggga gcagaaacac ctgaatcaag
 +
    5161 gggcgggaaa ggcgcaagtg gaacgcgaaa agtcggtgcc atccaaggtg atttcagtgc
 +
    5221 caaccatgtg ctgaaagaga ggagaagaag agagaagctc aatgagaagt tcataattct
 +
    5281 gcgatctttg gtacctttca tgacaaaggt aattaagtac tccctctatt tctataaagc
 +
    5341 cgtatttgac tagttatctt atttagaaag tatgtgcaaa tatgtaaaat ataagtcata
 +
    5401 cttaaagaac ttttaatgtt attaaataat aagtcacacc aaaaataaaa catatatatt
 +
    5461 tttaataaga caaatgatta aatgtatata taaaaattaa tagcgtcaca tattttaaaa
 +
    5521 tagaggggta tttaagtacc cacaggatca tcaaaattca gttatctttt cttaagcctc
 +
    5581 taacgaacat tggaagatcc tcactaatgg cagcatgaat ctagggttca ctatttcgga
 +
    5641 atgcaaaata tgttttaccg ggcatccgat ttttaaaaaa ttcagaatga agaaaattga
 +
    5701 atctttttta tggatttgaa taaatcttga taaattcgaa aaaatttccg aacttttggc
 +
    5761 cagaagtgaa tcctacccgt atccaccggt aataaaccta aatttttggg agtaatgaat
 +
    5821 taatgttata tataatccat gaattatata gttccaaact actccgtaac aaattttcag
 +
    5881 gagtagtgaa attaatatta ttacaatctc agaaaaaaat ggcagaaaca attaatctgt
 +
    5941 tttcaattat taattaattt gtttttgtgt ccagatggac aaggcgtcga tactaggcga
 +
    6001 cacgatcgag tacgtgaagc agctaaggaa ccgcatacaa gagctcgagt cgtcgtcgtc
 +
    6061 gtcgtcacga gcagccgccc gggcgccatc ggcggcggcc gccgggaggc ggaggaagag
 +
    6121 atccgccgcc gccgccactg ccacggcggc ggaagggatg agcagcagca atggccgcaa
 +
    6181 tggcggcgag gcggcggagg tggtgcaggt gtccatcatc gagagcgacg cgctgctgga
 +
    6241 gctccggtgc ggttgcggcg gcggcggcgg cggtgtggtg ctgctccggg tgatgcaggc
 +
    6301 gatgcaggag ctccagctgg aggtcaccgc cgtccaggcc tcgtgcgccg gtggcgagct
 +
    6361 gctcgccgag ctgcgcgcca aggtcgtcgt tatgatcctg atctgcatga aaatgcaaat
 +
    6421 gcaaatgcaa atgcagaatt aa
 +
</dnaseqindica>|
 +
Link = [http://www.ncbi.nlm.nih.gov/nuccore/78057269]|
 +
}}
 +
[[Category:Genes]]
 +
[[Category:Oryza Sativa Japonica Group]]
 +
[[Category:Japonica Genes]]
 +
[[Category:Japonica Chromosome 7]]
 +
[[Category:Chromosome 7]]

Revision as of 04:25, 29 May 2014

Please input one-sentence summary here.

characteristic

Function

Expression

Nucleotide Polymorphisms

Allele Distribution

Haplotype Diversity

Recombination

Evolution

Labs working on this gene

References

Structured Information

Gene Name

Os07g0211500

Description

Pericarp Color and red grain color gene Length = 833bp

Version

{{{Version}}}

Length

{{{Length}}}

Definition

Oryza sativa (japonica cultivar-group) cultivar H75 brown pericarp 

           and seed coat (Rc) gene, complete cds.
Source

Oryza sativa Japonica Group (Japanese rice) 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

{{{AP}}}

Sequence Coding Region

{{{CDS}}}

Expression

GEO Profiles:Os07g0211500

Genome Context

{{{GCID}}}

Gene Structure

<gbrowseImage2> source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

{{{CDNA}}}

Protein Sequence

{{{AA}}}

Gene Sequence

{{{DNA}}}

External Link(s)

NCBI Gene:Os07g0211500, [1]

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os07g0211500&oldid=173846"