Difference between revisions of "Os01g0257300"

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==References==
 
==References==
 
Please input cited references here.
 
Please input cited references here.
 +
*Ye Han;Hong Cao;Jiafu Jiang;Yunyuan Xu;Jizhou Du;Xin Wang;Ming Yuan;Zhiyong Wang;Zhihong Xu and Kang Chong
 +
Rice ROOT ARCHITECTURE ASSOCIATED1 Binds the Proteasome Subunit RPT4 and Is Degraded in a D-Box and Proteasome-Dependent Manner Plant Physiology, 2008, 148(2): 843-855
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*Lei Ge;Hui Chen;Jia-Fu Jiang;Yuan Zhao;Ming-Li Xu;Yun-Yuan Xu;Ke-hui Tan;Zhi-Hong Xu and Kang Chong
 +
  Overexpression of OsRAA1 Causes Pleiotropic Phenotypes in Transgenic Rice Plants, including Altered Leaf, Flower, and Root Development and Root Response to Gravity
 +
  Plant Physiology, 2004, 135(3): 1502-1513
  
 
==Structured Information==
 
==Structured Information==

Revision as of 14:57, 30 May 2014

Please input one-sentence summary here.

Annotated Information

Function

OsRAA1 encodes a 12.0-kD protein that has 58% homology to the AtFPF1 (Flowering Promoting Factor 1) in Arabidopsis, which has not been reported as modulating root development yet.

Expression

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Evolution

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Labs working on this gene

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References

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  • Ye Han;Hong Cao;Jiafu Jiang;Yunyuan Xu;Jizhou Du;Xin Wang;Ming Yuan;Zhiyong Wang;Zhihong Xu and Kang Chong
Rice ROOT ARCHITECTURE ASSOCIATED1 Binds the Proteasome Subunit RPT4 and Is Degraded in a D-Box and Proteasome-Dependent Manner Plant Physiology, 2008, 148(2): 843-855
  • Lei Ge;Hui Chen;Jia-Fu Jiang;Yuan Zhao;Ming-Li Xu;Yun-Yuan Xu;Ke-hui Tan;Zhi-Hong Xu and Kang Chong
 Overexpression of OsRAA1 Causes Pleiotropic Phenotypes in Transgenic Rice Plants, including Altered Leaf, Flower, and Root Development and Root Response to Gravity
 Plant Physiology, 2004, 135(3): 1502-1513

Structured Information

Gene Name

Os01g0257300

Description

Conserved hypothetical protein

Version

NM_001049166.1 GI:115435745 GeneID:4326229

Length

785 bp

Definition

Oryza sativa Japonica Group Os01g0257300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8585137..8585921

Sequence Coding Region

8585497..8585826

Expression

GEO Profiles:Os01g0257300

Genome Context

<gbrowseImage1> name=NC_008394:8585137..8585921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8585137..8585921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggggtttgggtgttcaagaacggggtggtgagattggtggagaagcagcaggcgacggcggggacggcggtggcgggagggaggaggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggaggcgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttccacaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccgtccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgcctaa</cdnaseq>

Protein Sequence

<aaseq>MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVS SYAALEARLTALGWERYYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRD SFRVVDA</aaseq>

Gene Sequence

<dnaseqindica>96..425#tccatccacccatagctatctctagctagcttgcacattcttcattcttcttgcaatcagagctagagaaaaagagtttgagagagatctaagagatgtcaggggtttgggtgttcaagaacggggtggtgagattggtggagaagcagcaggcgacggcggggacggcggtggcgggagggaggaggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggaggcgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttccacaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccgtccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgcctaaattgacctatgtataggctcgcatgcatgcaaggtagacgaccatccaccttgcatgcatgcaggctatcattctctcttcgtctccgtcttcgtctttcatctttgttgtggtgtgtgtgaatttattatacttcttatgactgtgtgtgtgactgtgtgagagttcatggagagtgatgagtagtggtatacatatgtgtcgtcgctgatcgatttggtttattaccttgtgggtgggtattaattatcagcagtgtgttatatcaattgcttacttgtatgtgtatcatgtacatgagtgagtgtggctgatgcatatatatagaggtctttaataattatgtactatatatttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0257300, RefSeq:Os01g0257300