Difference between revisions of "User:Jieomlong"
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| − | + | F-box proteins play diverse roles in regulating numerous physiological processes in plants. This study isolated a gene (OsFbx352) from rice encoding an F-box domain protein and characterized its role in seed germination. Expression of OsFbx352 was upregulated by abscisic acid (ABA). | |
==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
Please input function information here. | Please input function information here. | ||
| − | + | 1.OsFbx352 encodes a F-box domain protein and is suppressed by glucose. | |
| + | 2.Generation of transgenic rice plants with altered. | ||
| + | 3.Germination of transgenic seeds displayed different sensitivity to ABA expression of OsFbx352. | ||
===Expression=== | ===Expression=== | ||
Please input expression information here. | Please input expression information here. | ||
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===Evolution=== | ===Evolution=== | ||
Please input evolution information here. | Please input evolution information here. | ||
| − | + | F-box proteins comprise one of the large protein families in plants. There are more than 692 and 779 F-box genes in the A. thaliana and rice genomes, respectively (Xu et al., 2009).Previous studies demonstrated that F-box proteins are involved in the regulation of several biological processes, including circadian clock, self-incompatibility, photomorphogenesis, floral meristem, phytohormonal signalling, and responses to abiotic stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al.,2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For instance, the F-box protein TIR1/AFB can bind to the transcriptional repressor protein Aux/IAA, thus promoting their proteasomal degradation and activating auxin-induced transcription (Dharmasiri et al., 2005; Tan et al., 2007). The involvement of | |
| + | F-box proteins in response to both biotic and abiotic stresses has also been reported. | ||
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
Revision as of 11:57, 2 June 2014
Please input one-sentence summary here. F-box proteins play diverse roles in regulating numerous physiological processes in plants. This study isolated a gene (OsFbx352) from rice encoding an F-box domain protein and characterized its role in seed germination. Expression of OsFbx352 was upregulated by abscisic acid (ABA).
Contents
Annotated Information
Function
Please input function information here. 1.OsFbx352 encodes a F-box domain protein and is suppressed by glucose. 2.Generation of transgenic rice plants with altered. 3.Germination of transgenic seeds displayed different sensitivity to ABA expression of OsFbx352.
Expression
Please input expression information here.
Evolution
Please input evolution information here. F-box proteins comprise one of the large protein families in plants. There are more than 692 and 779 F-box genes in the A. thaliana and rice genomes, respectively (Xu et al., 2009).Previous studies demonstrated that F-box proteins are involved in the regulation of several biological processes, including circadian clock, self-incompatibility, photomorphogenesis, floral meristem, phytohormonal signalling, and responses to abiotic stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al.,2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For instance, the F-box protein TIR1/AFB can bind to the transcriptional repressor protein Aux/IAA, thus promoting their proteasomal degradation and activating auxin-induced transcription (Dharmasiri et al., 2005; Tan et al., 2007). The involvement of F-box proteins in response to both biotic and abiotic stresses has also been reported. You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA000063 |
|---|---|
| Description |
Putative uncharacterized protein |
| Definition |
Oryza sativa Indica Group BGIOSGA000063, complete gene. |
| LocusTag |
P0483G10.23 |
| Ensembl Transcript ID |
BGIOSGA000063-TA |
| Ensembl Protein ID |
BGIOSGA000063-PA |
| Length |
2809 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:46486990..46489798 |
| Sequence Coding Region |
46489660..46489798,46489009..46489108,46488808..46488928,46488319..46488431,46488095..46488216 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:46486990..46489798 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:46486990..46489798 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGTGGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAACTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTTAAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACTGTTGAACCAGAAAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGAGAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MDVSRRKKWVAWVAAVTIFVVLMLVTPAIPQNEEYHDFADQRRLFLGIPNTLNVISNIPFFFVGVVGLVLCHYKNYFRLNSQGELWSWTLFFAGVTAVAFGSSYYHLKPNDATLVWDRLPMTIAFTSVMAIFIIERVDDRAGTKSLAPLVIAGALSIMFFDDLRPYAVIQFVPCIAIPVMAIVIPPMYTHSSYWLWAAGFYLLAKVEEAADKPIYKWTHQIVSGHTLKHLAAAMVPVFLALMLAKRTVEPERVSLFQRWKVKLVAVRETRFNKDRNTVDYNYIAVSTTPEP</aaseq> |
| Gene Sequence |
<dnaseqindica>1..139#691..790#871..991#1368..1480#1583..1704#1994..2153#2689..2809#ATGGATGTGAGCAGGAGGAAGAAGTGGGTGGCGTGGGTGGCGGCGGTCACCATCTTCGTCGTGCTCATGCTCGTCACCCCGGCCATCCCGCAGAACGAGGAGTACCACGACTTCGCCGACCAGCGCCGCCTCTTCCTCGGTATGCCACAAACCAACCCTCCCTCCCCGCCGCAAACCTAGGGCGGACCTTCCCTTGCGGCCGCCATAGCTCGCCGTCCGCGGTATTGAGCTCCCGTCTCTCCGAGCTATTGAGCTCTCGGGGTAGCCTCCACCCGGCGCCGGCAAGACGATCCGCGAGCAGGAGAGCAGCGATTGTGCCAGTGCTTGTCCCTGACGGCGCAATGGCCAACGTTGAGTGACGAGTTGACTCGAAATCGCGAATTCGAGGTCGCTTGCATCGCCTAAATCGATCCCCTTTGTATTCACTACAAAAATTGATTGCCCTTTGTTTGCGCTGGGTTCAGCAAGATTAGCTTGTTAGGAAGGATTTTGCAGGCTATACCAGTTTCCTGTTTATTTCACGAACCCAAAATAAACATGAATATAGTATAATTGAGGGGGAATTTGAGGCGCAAACGAATAGAGTTTAAATTTTGCTTATATGTTCAATAAGAGGGTTGCAATGCTTGTAATCACTACTTGATGCACTAAGTTTGCAAAATCATGTGGATTTTTTTTTTTGTTTTGCAGGGATCCCCAATACGCTGAATGTGATTTCAAACATCCCCTTCTTTTTTGTGGGTGTCGTTGGGCTCGTCTTGTGCCATTACAAAAACTACTTCAGGCTAAAGTTAGACCATTACTGGTTCATCTTCTAATTCTAGTTAAGATTTTGATGCACTCTGTTGTTAACCTTCCCCTTCCTGGCAGCTCGCAAGGGGAGCTCTGGAGTTGGACACTGTTCTTTGCTGGTGTGACTGCTGTTGCTTTTGGTTCATCCTATTATCATCTCAAACCGAATGATGCCACACTAGTTTGGGACAGATTGCCGGTGAGTTGTTTCTAGACTTACATTGCCTTGCTCTAGGATTTGTACACACCCCATTATGTTGAAGCTGTCTCAGAATGTCAATGCATACATTTTTTTTGGTGGGATAGAATTCAACTCAGATCCTTGTGTAGTATAATCTGAATATGCTATGGCCCTGTTTAGATAGTGTTGTTCTGTTGGGTGTGATCTGCTTGAATCAAAACAGGGTAACTAATCCACTTGGATCTTTTGCCTGATACGCTCTAGTATATTTGGCTTGTTTTCTTCAGAATTGCCTGTCAGAGACATAAAGCATGTCATCAGTTCATAATTTTCACCCTTGCTTTTATCAATATTTAATATGTTAAAGGATGGCATATTTGCTTGTTCTATGTAGATGACAATTGCTTTCACATCTGTCATGGCCATTTTCATTATTGAGAGGGTTGATGATAGGGCAGGAACAAAGTCCCTAGCACCTCTTGTTATTGCTGGTGCACTAAGCATCATGTATTGGAGGCAAGCTTCTCCAATTGTTTAACCATCCTTCCTCAGAAATATTTTCTGTACTTCTTTCACACCTTCCATTTTGCTGCCTTAACTCTTATGTAGGTTCTTTGACGATCTTCGCCCATATGCAGTAATTCAGTTTGTTCCATGCATTGCAATACCTGTGATGGCTATTGTAATTCCACCAATGTATACACATTCGAGCTATTGGCTGTGGGCAGCAGGTTAGTGTTATTCTTGATCAATAGTATTTGATCTATGTACCTTCATTAGCATTTAGGTTGAAAAATGTGGTATTTGTGGTTCACCTATATATTATGAATCATTCAATTGATCATTTCTCTGCACCTAATAACTGTTGATGATACTTAAATGGTTTTCATTTTAATCTATTTCTACATATCATAAATTGATTCGCAGTGACCAAGTTAATTGATTGGTTTTCTGGAAATTCATACACAATCAGCACCTCACCATATTTTTCTGTTTTCTGATTTCTCAAAACAATTCCAGGATTTTACCTCCTTGCTAAGGTAGAAGAGGCCGCAGATAAACCTATATATAAATGGACCCATCAAATTGTTAGCGGTCATACTCTTAAGCATCTAGCTGCTGCAATGGTGCCTGTGTTCTTGGCACTCATGCTGGCCAAAAGGACTGTTGAACCAGAAAGGTATGCTTTATATACTGGCGTTTTAAGAACCACGTCTTTACTTCGATAAGTGCATCATTGGGTTCAACTCTTGAACTGTTCTTCTATTTAAGCTGTTGAATGGACCTTGGTCAGAATTCAGAAGATATACTTGCGTTGGCATTGTTACTTTGTCTTAAGGAATTATTCCATCATAAATTATTGAGCTATCTGTTCTATTAATTTTGCAAATGCAATCACTATTTGTTTTTGGGAAAAGAATGAAGTTTGTTTTCCTTCGGTTAGAATAAATTCATAAATGCCGTTGTAACTTTTGAATTAGTGTGTTGTTTGTTTCGCCAGTAATTCCATGGTGGTTCTCCCATAGTCCCATATCTTTGCTTCTTAGGATGAGCATATTTCAAATAATTTTATCCCCTCCATTGCAAACGATATCTGTTGTCTGTTGATTGATTTGTCAGCCTTTTTTTTAGCTCTGTTAATATCATGATTAAATTTATGAAGTCTTGCATAACTCTACCCCGTGTCTCATGATATTTTTTTTTCTGGAATGCAGGGTAAGTTTATTCCAGCGGTGGAAGGTCAAGTTGGTTGCAGTGAGAGAGACTCGATTCAACAAGGACAGGAATACAGTCGACTACAACTATATTGCAGTTTCCACTACACCTGAACCATAG</dnaseqindica> |
| External Link(s) |
