Difference between revisions of "Os12g0111500"
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===Evolution=== | ===Evolution=== | ||
Please input evolution information here. | Please input evolution information here. | ||
| − | + | F-box proteins comprise one of the large protein families in | |
| + | plants. There are more than 692 and 779 F-box genes in the | ||
| + | A. thaliana and rice genomes, respectively (Xu et al., 2009). | ||
| + | Previous studies demonstrated that F-box proteins are involved | ||
| + | in the regulation of several biological processes, including circadian | ||
| + | clock, self-incompatibility, photomorphogenesis, floral | ||
| + | meristem, phytohormonal signalling, and responses to abiotic | ||
| + | stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al., | ||
| + | 2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For | ||
| + | instance, the F-box protein TIR1/AFB can bind to the transcriptional | ||
| + | repressor protein Aux/IAA, thus promoting their proteasomal | ||
| + | degradation and activating auxin-induced transcription | ||
| + | (Dharmasiri et al., 2005; Tan et al., 2007). The involvement of | ||
| + | F-box proteins in response to both biotic and abiotic stresses has | ||
| + | also been reported. | ||
You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
Revision as of 12:00, 2 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here. F-box proteins comprise one of the large protein families in plants. There are more than 692 and 779 F-box genes in the A. thaliana and rice genomes, respectively (Xu et al., 2009). Previous studies demonstrated that F-box proteins are involved in the regulation of several biological processes, including circadian clock, self-incompatibility, photomorphogenesis, floral meristem, phytohormonal signalling, and responses to abiotic stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al., 2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For instance, the F-box protein TIR1/AFB can bind to the transcriptional repressor protein Aux/IAA, thus promoting their proteasomal degradation and activating auxin-induced transcription (Dharmasiri et al., 2005; Tan et al., 2007). The involvement of F-box proteins in response to both biotic and abiotic stresses has also been reported. You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os12g0111500 |
|---|---|
| Description |
BTB domain containing protein |
| Version |
NM_001072500.1 GI:115486961 GeneID:4351297 |
| Length |
1837 bp |
| Definition |
Oryza sativa Japonica Group Os12g0111500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:601666..603502 |
| Sequence Coding Region |
601796..602257,602353..602529,603210..603398 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:601666..603502 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:601666..603502 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDCCVCSPMASMYRLPRNAICAACYEGAKAIIAFFNDDDDEHAD ADQGSVKPSRLTKLNSTTKGLRDAWEEVKQMRCREEETKQRASFLQQGFAAAWKDGIH TDIAVRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHL LAFLYTGSLATCTEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAE LSSSAALKERAMGAVVEHAEEVVFSPEYEEFAVRNAALCVQITRALLANKAFPAKTP</aaseq> |
| Gene Sequence |
<dnaseqindica>1246..1707#974..1150#105..293#aatgctagcgttgctgttcacgtcgttgccaagccacaaggagaaggaagaaggaagagaaggcagaaggaagcagcaggagaaggagaaggccagaagaaacaatggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaaggtaagaccttcccatatctcattttgctcctttattaattagtcctttaggattggtatgactatgttcggtttacaaccatctcgattgtgccgtgtgctctacttccatgaaaaatctagccttgcgtgtttctagattctagaagcagagaaatttcggtagagaatgaattgataaaaaggaattccatctcacatgtaatgcaatataaactcttgttgcattggttacatcattcagtttcattgacgcatgcgtcaggtttgctgtcaacgttgtgttggttaatggtgaggagcaagtctcaatcgagagttgcatgagaatgataggtttggtggaaatctcattgtcaaaaggttcatgattgatcgatgcttaaagaccgttttcagaagctgtattttatatactagtgtgcttcaacagctgatgttatctttttattaaaaaaccaaaccggcatgacatacacaagattctccttgattgcaatagctggaatgaggaaataaaggtgcatgccttggacaagttgttatgctaatcttcagaaagaattaattctgaacagtcacagattaatgctaattggtgggggtgcatgggacatacatactacacttatcagcatcatagtgctaactgctaacatttgtgcgtgttactcaatgtagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgtcagtctctctctctctcagtttcagcccaataggccggccttcttttagtttgattgggcccaatgaaactaattaggcccagctatatacaggcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaatatcccttttatttttcttcgtttagaatttagttagacgacgtacgatgtataagtgtaattaaatgatagtacatgcatatctctggaattaatgtgatcaatatatacaatttagattctttgcacg</dnaseqindica> |
| External Link(s) |
