Difference between revisions of "Os01g0172400"
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<ref name=“ref1”>Sang Y, Zhang S, Li W, Huang B, Wang X (2001), Regulation of plant water loss by manipulating the expression of phospholipase Dα. Plant J. 28:135-144. </ref> | <ref name=“ref1”>Sang Y, Zhang S, Li W, Huang B, Wang X (2001), Regulation of plant water loss by manipulating the expression of phospholipase Dα. Plant J. 28:135-144. </ref> | ||
<references/> | <references/> | ||
Revision as of 05:17, 5 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
PLDα occupies a critical step in controlling stomatal movements and plant response to water stress. [1]
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
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<references> [1]
Structured Information
| Gene Name |
Os01g0172400 |
|---|---|
| Description |
Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) |
| Version |
NM_001048688.1 GI:115434789 GeneID:4327647 |
| Length |
4181 bp |
| Definition |
Oryza sativa Japonica Group Os01g0172400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:3723613..3727793 |
| Sequence Coding Region |
3723983..3724416,3724895..3726791,3727332..3727439 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:3723613..3727793 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:3723613..3727793 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcgctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaagtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgctggtatgagtcgttccacatctattgcgctcatatggcttccaatgtgatcttcactgtcaagattgataaccctattggggcaacgaatattgggagggcttacctgcctgtccaagagcttctcaatggagaggagattgacagatggctcgatatctgtgataataaccgcgagcctgttggtgagagcaagatccatgtgaagcttcagtacttcgatgtttccaaggatcgcaattgggcgaggggtgtccgcagtaccaagtatccaggtgttccttacaccttcttctctcagaggcaagggtgcaaagttaccttgtaccaagatgctcatgtcccagacaacttcattccaaagattccgcttgccgatggcaagaattatgaaccccacagatgctgggaggatatctttgatgctataagcaatgctcaacatttgatttacatcactggctggtctgtatacactgagatcaccttggttagggactccaatcgtccaaaacctggaggggatgtcacccttggggagttgctcaagaagaaggccagtgaaggtgttcgggtcctcatgcttgtgtgggatgacaggacttcagttggtttgctaaagagggatggcttgatggcaacacatgatgaggaaactgaaaattacttccatggctctgacgtgaactgtgttctatgccctcgcaaccctgatgactcaggcagcattgttcaggatctgtcgatctcaactatgtttacacaccatcagaagatagtagttgttgaccatgagttgccaaaccagggctcccaacaaaggaggatagtcagtttcgttggtggccttgatctctgtgatggaaggtatgacactcagtaccattctttgtttaggacactcgacagtacccatcatgatgacttccaccagccaaactttgccactgcatcaatcaaaaagggtggacctagagagccatggcatgatattcactcacggctggaagggccaatcgcatgggatgttctttacaatttcgagcagagatggagaaagcagggtggtaaggatctccttctgcagctcagggatctgtctgacactattattccaccttctcctgttatgtttccagaggacagagaaacatggaatgttcagctatttagatccattgatggtggtgctgcttttgggttccctgatacccctgaggaggctgcaaaagctgggcttgtaagcggaaaggatcaaatcattgacaggagcatccaggatgcatacatacatgccatccggagggcaaagaacttcatctatatagagaaccaatacttccttggaagttcctatgcctggaaacccgagggcatcaagcctgaagacattggtgccctgcatttgattcctaaggagcttgcactgaaagttgtcagtaagattgaagccggggaacggttcactgtttatgttgtggtgccaatgtggcctgagggtgttccagagagtggatctgttcaggcaatcctggactggcaaaggagaacaatggagatgatgtacactgacattacagaggctctccaagccaagggaattgaagcgaaccccaaggactacctcactttcttctgcttgggtaaccgtgaggtgaagcaggctggggaatatcagcctgaagaacaaccagaagctgacactgattacagccgagctcaggaagctaggaggttcatgatctatgtccacaccaaaatgatgatagttgacgatgagtacatcatcatcggttctgcaaacatcaaccagaggtcgatggacggcgctagggactctgagatcgccatgggcgggtaccagccataccatctggcgaccaggcaaccagcccgtggccagatccatggcttccggatggcgctgtggtacgagcacctgggaatgctggatgatgtgttccagcgccccgagagcctggagtgtgtgcagaaggtgaacaggatcgcggagaagtactgggacatgtactccagcgacgacctccagcaggacctccctggccacctcctcagctaccccattggcgtcgccagcgatggtgtggtgactgagctgcccgggatggagtactttcctgacacacgggcccgcgtcctcggcgccaagtcggattacatgccccccatcctcacctcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MAQMLLHGTLHATIFEAASLSNPHRASGSAPKFIRKFVEGIEDT VGVGKGATKVYSTIDLEKARVGRTRMITNEPINPRWYESFHIYCAHMASNVIFTVKID NPIGATNIGRAYLPVQELLNGEEIDRWLDICDNNREPVGESKIHVKLQYFDVSKDRNW ARGVRSTKYPGVPYTFFSQRQGCKVTLYQDAHVPDNFIPKIPLADGKNYEPHRCWEDI FDAISNAQHLIYITGWSVYTEITLVRDSNRPKPGGDVTLGELLKKKASEGVRVLMLVW DDRTSVGLLKRDGLMATHDEETENYFHGSDVNCVLCPRNPDDSGSIVQDLSISTMFTH HQKIVVVDHELPNQGSQQRRIVSFVGGLDLCDGRYDTQYHSLFRTLDSTHHDDFHQPN FATASIKKGGPREPWHDIHSRLEGPIAWDVLYNFEQRWRKQGGKDLLLQLRDLSDTII PPSPVMFPEDRETWNVQLFRSIDGGAAFGFPDTPEEAAKAGLVSGKDQIIDRSIQDAY IHAIRRAKNFIYIENQYFLGSSYAWKPEGIKPEDIGALHLIPKELALKVVSKIEAGER FTVYVVVPMWPEGVPESGSVQAILDWQRRTMEMMYTDITEALQAKGIEANPKDYLTFF CLGNREVKQAGEYQPEEQPEADTDYSRAQEARRFMIYVHTKMMIVDDEYIIIGSANIN QRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLDDVFQRPESLE CVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARV LGAKSDYMPPILTS</aaseq> |
| Gene Sequence |
<dnaseqindica>3378..3811#1003..2899#355..462#agtctctcttctcccgcaattttataatctcgctcgatccaatctgctccccttcttcttctactctccccatctcggctctcgccatcgccatcctcctctcccttcccggagaagacgcctccctccgccgatcaccacccggtaagcccagtgtgcttaggctaagcgcactagagcttcttgctcgcttgcttcttctccgctcagatctgcttgcttgcttgcttcgctagaaccctactctgtgctgcgagtgtcgctgcttcgtcttccttcctcaagttcgatctgattgtgtgtgtgggggggcgcaggtagggcgaggagggagccaaatccaaatcagcagccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcgctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaaggttcggacccttctccttaatctactcgtctttgctcttgctctttttcttttttgtccctttcttgtgtgtgcgtttgcatgagcccgaatttgatctgctagtgcacagtacagtcagatacactgaaacgatctggaaattctggattattaggaaaaataaagaggtagtagacaagaattggagatactttctatcaagattggtctattatgcttggccatttcttgtttgacccaagtacttctttgaatctagagtttgctgtgtgtgatgtggtgtgtgtttgtgtcaccaaaaatcttcattagctaaaactgaaattttatttattaactgacctactaaaaatgtagagttctctgtgtgtgatgtgtgcttgtgtcaccaaaaatcttgatttgatagagtttttatttatttattaactgacctactacaaatctattgctgtatgctatgtgtgtctgtatcacctgaaatgcaatgtcttcttctttgttgttcttgatctaacacgtgagctcatgtcaacagtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgctggtatgagtcgttccacatctattgcgctcatatggcttccaatgtgatcttcactgtcaagattgataaccctattggggcaacgaatattgggagggcttacctgcctgtccaagagcttctcaatggagaggagattgacagatggctcgatatctgtgataataaccgcgagcctgttggtgagagcaagatccatgtgaagcttcagtacttcgatgtttccaaggatcgcaattgggcgaggggtgtccgcagtaccaagtatccaggtgttccttacaccttcttctctcagaggcaagggtgcaaagttaccttgtaccaagatgctcatgtcccagacaacttcattccaaagattccgcttgccgatggcaagaattatgaaccccacagatgctgggaggatatctttgatgctataagcaatgctcaacatttgatttacatcactggctggtctgtatacactgagatcaccttggttagggactccaatcgtccaaaacctggaggggatgtcacccttggggagttgctcaagaagaaggccagtgaaggtgttcgggtcctcatgcttgtgtgggatgacaggacttcagttggtttgctaaagagggatggcttgatggcaacacatgatgaggaaactgaaaattacttccatggctctgacgtgaactgtgttctatgccctcgcaaccctgatgactcaggcagcattgttcaggatctgtcgatctcaactatgtttacacaccatcagaagatagtagttgttgaccatgagttgccaaaccagggctcccaacaaaggaggatagtcagtttcgttggtggccttgatctctgtgatggaaggtatgacactcagtaccattctttgtttaggacactcgacagtacccatcatgatgacttccaccagccaaactttgccactgcatcaatcaaaaagggtggacctagagagccatggcatgatattcactcacggctggaagggccaatcgcatgggatgttctttacaatttcgagcagagatggagaaagcagggtggtaaggatctccttctgcagctcagggatctgtctgacactattattccaccttctcctgttatgtttccagaggacagagaaacatggaatgttcagctatttagatccattgatggtggtgctgcttttgggttccctgatacccctgaggaggctgcaaaagctgggcttgtaagcggaaaggatcaaatcattgacaggagcatccaggatgcatacatacatgccatccggagggcaaagaacttcatctatatagagaaccaatacttccttggaagttcctatgcctggaaacccgagggcatcaagcctgaagacattggtgccctgcatttgattcctaaggagcttgcactgaaagttgtcagtaagattgaagccggggaacggttcactgtttatgttgtggtgccaatgtggcctgagggtgttccagagagtggatctgttcaggcaatcctggactggcaaaggagaacaatggagatgatgtacactgacattacagaggctctccaagccaagggaattgaagcgaaccccaaggactacctcactttcttctgcttgggtaaccgtgaggtgaagcaggctggggaatatcagcctgaagaacaaccagaagctgacactgattacagccgagctcaggaagctaggaggttcatgatctatgtccacaccaaaatgatgataggtaccgagtgagctttatattacatatttgcattcactatgcaatttttgttcatttaaagcatgtcagatgagttacatacttatgtagcatttgttaattttttttaccaagtattgcatttgtctatttattagtttatatgcattgcatatgtcaagctctaagttgaagtcatgcttccctttactcttaaagtaacatctttttagacagaattgtcttctgctctctaaatctgtttctgtttaatacaggtttttatttttaaagaaataatgtcgtattgtaggttatttagctgattttactgttgcattctgtcgttctaaaaagatgaaaatccttttaacaaaagaaataaacaagatcctctaatgatcaagctagtaacttcatctccttattcggtttcttttttctatcaaaaatatacacttattgttcaagctagtaacttcatttcttccattttcagttgacgatgagtacatcatcatcggttctgcaaacatcaaccagaggtcgatggacggcgctagggactctgagatcgccatgggcgggtaccagccataccatctggcgaccaggcaaccagcccgtggccagatccatggcttccggatggcgctgtggtacgagcacctgggaatgctggatgatgtgttccagcgccccgagagcctggagtgtgtgcagaaggtgaacaggatcgcggagaagtactgggacatgtactccagcgacgacctccagcaggacctccctggccacctcctcagctaccccattggcgtcgccagcgatggtgtggtgactgagctgcccgggatggagtactttcctgacacacgggcccgcgtcctcggcgccaagtcggattacatgccccccatcctcacctcatagacgaggaagcactacactacaatctgctggcttctcctgtcagtccttctgtacttcttcagtttggtggcgagatggtatggccgttgttcagaatttcttcagaatagcagttgttacagttgtgaatcataaagtaataagtgcagtatctgtgcatggttgagttgggaagaagatcggggatgcaatgatgcttgtgaagttgtgatgccgtttgtaagatgggaagttgggaactactaagtaattggcatgattgtactttgcactactgtttagcgttgttgatactggttaaccgtgtgttcatctgaacttgattcttgatgcagtttgtggcattaccagtttatcatcgttcttcagg</dnaseqindica> |
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