Difference between revisions of "Os08g0103900"
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==Annotated Information== | ==Annotated Information== | ||
| + | a NAM-like protein gene | ||
===Function=== | ===Function=== | ||
Please input function information here. | Please input function information here. | ||
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You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
| + | ===Related arcitles=== | ||
| + | [1] "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 8, PAC clone:P0015C07."Sasaki T., Matsumoto T., Yamamoto K.Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases | ||
| + | [2] "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice."Kikuchi S., Satoh K., Nagata T., Kawagashira N. Science 301:376-379(2003) | ||
| + | [3] "The map-based sequence of the rice genome."International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) | ||
| + | [4] "The map-based sequence of the rice genome."International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M.Nature 436:793-800(2005) | ||
| + | [5] "The Rice Annotation Project Database (RAP-DB): 2008 update."The Rice Annotation Project (RAP)Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T. Nucleic Acids Res. 36:D1028-D1033(2008) | ||
| + | [6] "The rice annotation project database (RAP-DB): 2008 update."The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) | ||
| + | [7] "Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors."Zhong R., Lee C., McCarthy R.L., Reeves C.K. | ||
==Labs working on this gene== | ==Labs working on this gene== | ||
Revision as of 08:09, 6 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
a NAM-like protein gene
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Related arcitles
[1] "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 8, PAC clone:P0015C07."Sasaki T., Matsumoto T., Yamamoto K.Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases [2] "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice."Kikuchi S., Satoh K., Nagata T., Kawagashira N. Science 301:376-379(2003) [3] "The map-based sequence of the rice genome."International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [4] "The map-based sequence of the rice genome."International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M.Nature 436:793-800(2005) [5] "The Rice Annotation Project Database (RAP-DB): 2008 update."The Rice Annotation Project (RAP)Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T. Nucleic Acids Res. 36:D1028-D1033(2008) [6] "The rice annotation project database (RAP-DB): 2008 update."The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [7] "Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors."Zhong R., Lee C., McCarthy R.L., Reeves C.K.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0103900 |
|---|---|
| Description |
Similar to NAM-like protein |
| Version |
NM_001067310.1 GI:115474356 GeneID:4344435 |
| Length |
1990 bp |
| Definition |
Oryza sativa Japonica Group Os08g0103900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:209422..211411 |
| Sequence Coding Region |
209881..210386,210500..210787,210912..211092 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:209422..211411 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:209422..211411 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatcggcatgaggaggaggcaggagagtctccatgtgtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgccaggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacaggatcgagccatgggatctgcaagagcgttgcaagtacggtgggcatggcggcgatgagcagacggagtggtacttcttcagctacaaggaccgcaagtaccccagcgggacgaggaccaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaagccggtgctctcgtcgccgtcgacgagggtgatcgggatgaggaagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatccacgagtaccgcctccaatcaaacgaacacgcccctactcaggaggaaggttgggtggtttgccgcgcgtttcagaagccgatgcccaaccagcagcagcacaggctgtcctacggctgcatccccggcagctacggcgccggagcctacgccgccgtccccgacaactacagcttgctgctgcaccacgacaaccctagcttcgccgggcggccattgatgagcgccgctgcctcagctctcttcgccaacaacaacaataacagcgtcgtcgaccacagcaacattctgagttcagagtccaagcttcacttctccgacatgatgccgcctctggagagccccaccatcgtcgacggcgagggctacgtctcgcaggctagcagctgcgtcgacgtcgatcagcaagccggcatcgtcgactggaacctgctcaccagcttgctgccgccgccggcgcatcagctcttccaccacctgccttccgcttctagctccaagaacagcaacaacatttcttcgtcaggcttcatcgatgaccgagactga</cdnaseq> |
| Protein Sequence |
<aaseq>MDRHEEEAGESPCVPPGFRFHPTEEELVGYYLARKVASQKIDLD IIQELDLYRIEPWDLQERCKYGGHGGDEQTEWYFFSYKDRKYPSGTRTNRATAAGFWK ATGRDKPVLSSPSTRVIGMRKTLVFYKGRAPNGRKTDWIIHEYRLQSNEHAPTQEEGW VVCRAFQKPMPNQQQHRLSYGCIPGSYGAGAYAAVPDNYSLLLHHDNPSFAGRPLMSA AASALFANNNNNSVVDHSNILSSESKLHFSDMMPPLESPTIVDGEGYVSQASSCVDVD QQAGIVDWNLLTSLLPPPAHQLFHHLPSASSSKNSNNISSSGFIDDRD</aaseq> |
| Gene Sequence |
<dnaseqindica>1026..1531#625..912#320..500#atccagatgcgcttgcacttgcacttgcatgcagttcattgctctagctataggctatagctactatacactcatgagaatctgagattgggctgaaaattgatgagcatcgatctgaagaagacatatatatagctgatgatgatatagctttttctgcatatgcttgttttgatctgcagccaatcgatcgaggcatagagagtcaccaggcaatcaaattccaaccatccatcagctagatatatatacagcaaagatcacgatactcctagctagctagctagaagaattgatcggtcgatcggaggaaatagcaatggatcggcatgaggaggaggcaggagagtctccatgtgtgccgccggggttcaggtttcacccgacggaggaggagctggtgggctactacctcgccaggaaggtggcctcccagaagatcgatctcgacatcatccaggagctcgatctctacaggatcgagccatgggatctgcaaggtacgtactgatccattacattaaataaaccatgcattctattcatgcataattaatatcaattcagcaattaatttgggaactgaacgatcgatgattctgatgaattatatatatgtggcagagcgttgcaagtacggtgggcatggcggcgatgagcagacggagtggtacttcttcagctacaaggaccgcaagtaccccagcgggacgaggaccaaccgcgccacggcggcgggcttctggaaggccaccggccgcgacaagccggtgctctcgtcgccgtcgacgagggtgatcgggatgaggaagacgctggtgttctacaagggtcgcgcccccaacggccggaagaccgactggatcatccacgagtaccgcctccaatcaaacgaacacgcccctactcaggcatgcattgcaaccacctattccattccatcttaattttttacttctttacttaattatctgtcctactatatatgttaattcatggatattaatatggaatatggatgcaggaggaaggttgggtggtttgccgcgcgtttcagaagccgatgcccaaccagcagcagcacaggctgtcctacggctgcatccccggcagctacggcgccggagcctacgccgccgtccccgacaactacagcttgctgctgcaccacgacaaccctagcttcgccgggcggccattgatgagcgccgctgcctcagctctcttcgccaacaacaacaataacagcgtcgtcgaccacagcaacattctgagttcagagtccaagcttcacttctccgacatgatgccgcctctggagagccccaccatcgtcgacggcgagggctacgtctcgcaggctagcagctgcgtcgacgtcgatcagcaagccggcatcgtcgactggaacctgctcaccagcttgctgccgccgccggcgcatcagctcttccaccacctgccttccgcttctagctccaagaacagcaacaacatttcttcgtcaggcttcatcgatgaccgagactgatcgatcgatccagatcgattattatcaattgacaattcattcatcatatatatgcatgaattcttacaaatacgcacaattaaacgatcgagtgtactattaattagttgattactccgtctccatgatgtatacattaatttgaccactggccatcatcaggccatctgcatgcttactatctagcttatgtcagtacacggttgttagttcattcttaattaattagctactagtgtcagtgtgtgtatctatcggttgttcgtcttttgacctcattgctgagagaggtttgtaactgatgatgattaagttagctagcatttaattaggtgctatatatacacatatatatgcactatcactatatacatcatatatatgtatacatatatcgttgtctgcttaatgtgtacaccacctctctgcagtatatatagtattgatcaattaatttgt</dnaseqindica> |
| External Link(s) |
