Difference between revisions of "Os03g0309200"
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Please input one-sentence summary here. | Please input one-sentence summary here. | ||
| − | + | Rice phytochrome is the feeling of the red / far-red light receptors only.Rice only three phytochrome genes, PHYA, PHYB and PHYC. Hd3a expression inhibition PhyB mediated inhibition of rice is long-day flowering main reason. | |
==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
Revision as of 08:36, 6 June 2014
Please input one-sentence summary here. Rice phytochrome is the feeling of the red / far-red light receptors only.Rice only three phytochrome genes, PHYA, PHYB and PHYC. Hd3a expression inhibition PhyB mediated inhibition of rice is long-day flowering main reason.
Contents
Annotated Information
Function
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Expression
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Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os03g0309200 |
|---|---|
| Description |
Similar to Phytochrome B |
| Version |
NM_001056445.2 GI:297600819 GeneID:4332623 |
| Length |
7990 bp |
| Definition |
Oryza sativa Japonica Group Os03g0309200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:11070815..11078804 |
| Sequence Coding Region |
11070927..11070960,11071182..11073185,11073584..11074391,11075509..11075802,11078140..11078362 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:11070815..11078804 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:11070815..11078804 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ggtgaggtgaggcgaggaaaaaatcggacgcacccgcagtacaccctggacgcgcgcctccacgccgtgttcgagcagtcgggcgcgtcgggccgcagcttcgactacacgcagtcgctgcgtgcgtcgcccaccccgtcctccgagcagcagatcgccgcctacctctcccgcatccagcgcggcgggcacatacagcccttcggctgcacgctcgccgtcgccgacgactcctccttccgcctcctcgcctactccgagaacaccgccgacctgctcgacctgtcgccccaccactccgtcccctcgctcgactcctccgcggtgcctccccccgtctcgctcggcgcagacgcgcgcctccttttcgccccctcgtccgccgtcctcctcgagcgcgccttcgccgcgcgcgagatctcgctgctcaacccgctctggatccactccagggtctcctctaaacccttctacgccatcctccaccgcatcgatgtcggcgtcgtcatcgacctcgagcccgcccgcaccgaggatcctgcactctccatcgctggcgcagtccagtctcagaagctcgcggtccgtgccatctcccgcctccaggcgcttcccggcggtgacgtcaagctcctttgcgacaccgttgttgagtatgttagagagctcacaggttatgaccgcgttatggtgtacaggttccatgaggatgagcatggagaagtcgttgccgagagccggcgcaataaccttgagccctacatcgggttgcattatcctgctacagatatcccacaggcatcacgcttcctgttccggcagaaccgtgtgcggatgattgctgattgccatgctgcgccggtgagggtcatccaggatcctgcactaacacagccgctgtgcttggttgggtccacgctgcgttcgccgcatggttgccatgcgcagtatatggcgaacatgggttccattgcatctcttgttatggcagtgatcattagtagtggtggggatgatgatcataacatttcacggggcagcatcccgtcggcgatgaagttgtgggggttggtagtatgccaccacacatctccacggtgcatccctttcccactacggtatgcatgcgagttcctcatgcaagcctttgggttgcagctcaacatggagttgcagcttgcacaccaactgtcagagaaacacattctgcggacgcagacactgctgtgtgatatgctactccgggattcaccaactggcattgtcacacaaagccccagcatcatggaccttgtgaagtgtgatggtgctgctctgtattaccatgggaagtactaccctcttggtgtcactcccacagaagttcagattaaggacatcatcgagtggttgactatgtgccatggagactccacagggctcagcacagatagccttgctgatgcaggctaccctggtgctgctgcactaggagatgcagtgagtggaatggcggtagcatatatcacgccaagtgattatttgttttggttccggtcacacacagctaaggagataaagtggggtggtgcaaagcatcatccagaggataaggatgatggacaacgaatgcatccacgatcatcgttcaaggcatttcttgaagttgtgaagagtaggagcttaccatgggagaatgcggagatggatgcaatacattccttgcagctcatattgcgggactctttcagagattctgcagagggcacaagtaactcaaaagccatagtgaatggccaggttcagcttggggagctagaattacggggaatagatgagcttagctcggtagcaagggagatggttcggttgatcgagacagcaacagtacccatctttgcagtagatactgatggatgtataaatggttggaatgcaaaggttgctgagctgacaggcctctctgttgaggaagcaatgggcaaatcattggtaaatgatctcatcttcaaggaatctgaggaaacagtaaacaagctactctcacgagctttaagaggtgatgaagacaaaaatgtagagataaagttgaagacattcgggccagaacaatctaaaggaccaatattcgttattgtgaatgcttgttctagcagggattacactaaaaatattgttggtgtttgttttgttggccaagatgtcacaggacaaaaggtggtcatggataaatttatcaacatacaaggggattacaaggctatcgtacacaaccctaatcctctcatacccccaatatttgcttcagatgagaatacttgttgttcggagtggaacacagcaatggaaaaactcacaggatggtcaagaggggaagttgttggtaagcttctggtcggtgaggtctttggtaattgttgtcgactcaagggcccagatgcattaacgaaattcatgattgtcctacacaacgctataggaggacaggattgtgaaaagttccccttttcattttttgacaagaatgggaaatacgtgcaggccttattgactgcaaacacgaggagcagaatggatggtgaggccataggagccttctgtttcttgcagattgcaagtcctgaattacagcaagcctttgagattcagagacaccatgaaaagaagtgttatgcaaggatgaaggaattggcttacatttaccaggaaataaagaatcctctcaacggtatccgatttacaaactcgttattggagatgactgatctaaaggatgaccagaggcagtttcttgaaaccagcactgcttgtgagaaacagatgtccaaaattgttaaggatgctagcctccaaagtattgaggatggctctttggtgcttgagaaaggtgaattttcactaggtagtgttatgaatgctgttgtcagccaagtgatgatacagttgagagaaagagatttacaacttattcgagatatccctgatgaaattaaagaagcctcagcatatggtgaccaatatagaattcaacaagttttatgtgactttttgctaagcatggtgaggtttgctccagctgaaaatggctgggtggagatacaggtcagaccaaatataaaacaaaattctgatggaacagacacaatgcttttcctcttcaggtttgcctgtcctggcgaaggccttcccccagagattgttcaagacatgtttagtaactcccgctggacaacccaagagggtattggcctaagcatatgcaggaagatcctaaaattgatgggtggcgaggtccaatatataagggagtcggagcggagtttcttccatatcgtacttgagctgccccagcctcagcaagcagcaagtagggggacaagctga</cdnaseq> |
| Protein Sequence |
<aaseq>GEVRRGKNRTHPQYTLDARLHAVFEQSGASGRSFDYTQSLRASP TPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVP SLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAI LHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVE YVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNR VRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSIASLVMAVIIS SGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQ LAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGV TPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITPSDYL FWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIH SLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDE DKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFIN IQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGN CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAI GAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMT DLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVM IQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRP NIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMG GEVQYIRESERSFFHIVLELPQPQQAASRGTS</aaseq> |
| Gene Sequence |
<dnaseqindica>113..146#368..2371#2770..3577#4695..4988#7326..7548#gcaatcccactctcatctccctcagttactgccttgctccccaaccccaggagcaagcacaagtccactgcgtgcgtgcgagcgatgactccgataaccgcaggggcggtgaggtgaggtgaggcgaggaaaaaatcggacgcacccgcctaatccggaccaatccaccgcatcggcgccatggcctcgggtagccgcgccacgcccacgcgctccccctcctccgcgcggcccgcggcgccgcggcaccagcaccaccactcgcagtcctcgggcgggagcacgtcccgcgcgggagggggtggcgggggcgggggagggggagggggcggcgcggccgccgcggagtcggtgtccaaggccgtggcgcagtacaccctggacgcgcgcctccacgccgtgttcgagcagtcgggcgcgtcgggccgcagcttcgactacacgcagtcgctgcgtgcgtcgcccaccccgtcctccgagcagcagatcgccgcctacctctcccgcatccagcgcggcgggcacatacagcccttcggctgcacgctcgccgtcgccgacgactcctccttccgcctcctcgcctactccgagaacaccgccgacctgctcgacctgtcgccccaccactccgtcccctcgctcgactcctccgcggtgcctccccccgtctcgctcggcgcagacgcgcgcctccttttcgccccctcgtccgccgtcctcctcgagcgcgccttcgccgcgcgcgagatctcgctgctcaacccgctctggatccactccagggtctcctctaaacccttctacgccatcctccaccgcatcgatgtcggcgtcgtcatcgacctcgagcccgcccgcaccgaggatcctgcactctccatcgctggcgcagtccagtctcagaagctcgcggtccgtgccatctcccgcctccaggcgcttcccggcggtgacgtcaagctcctttgcgacaccgttgttgagtatgttagagagctcacaggttatgaccgcgttatggtgtacaggttccatgaggatgagcatggagaagtcgttgccgagagccggcgcaataaccttgagccctacatcgggttgcattatcctgctacagatatcccacaggcatcacgcttcctgttccggcagaaccgtgtgcggatgattgctgattgccatgctgcgccggtgagggtcatccaggatcctgcactaacacagccgctgtgcttggttgggtccacgctgcgttcgccgcatggttgccatgcgcagtatatggcgaacatgggttccattgcatctcttgttatggcagtgatcattagtagtggtggggatgatgatcataacatttcacggggcagcatcccgtcggcgatgaagttgtgggggttggtagtatgccaccacacatctccacggtgcatccctttcccactacggtatgcatgcgagttcctcatgcaagcctttgggttgcagctcaacatggagttgcagcttgcacaccaactgtcagagaaacacattctgcggacgcagacactgctgtgtgatatgctactccgggattcaccaactggcattgtcacacaaagccccagcatcatggaccttgtgaagtgtgatggtgctgctctgtattaccatgggaagtactaccctcttggtgtcactcccacagaagttcagattaaggacatcatcgagtggttgactatgtgccatggagactccacagggctcagcacagatagccttgctgatgcaggctaccctggtgctgctgcactaggagatgcagtgagtggaatggcggtagcatatatcacgccaagtgattatttgttttggttccggtcacacacagctaaggagataaagtggggtggtgcaaagcatcatccagaggataaggatgatggacaacgaatgcatccacgatcatcgttcaaggcatttcttgaagttgtgaagagtaggagcttaccatgggagaatgcggagatggatgcaatacattccttgcagctcatattgcgggactctttcagagattctgcagagggcacaagtaactcaaaagccatagtgaatggccaggttcagcttggggagctagaattacggggaatagatgagcttagctcggtagcaagggagatggttcggttgatcgagacagcaacagtacccatctttgcagtagatactgatggatgtataaatggttggaatgcaaaggttgctgagctgacaggcctctctgttgaggaagcaatgggcaaatcattggtaaatgatctcatcttcaaggaatctgaggaaacagtaaacaagctactctcacgagctttaagaggtacctctcttgtcatgctaattggttgttcttgcctttcatgttttcttttgcgaatatacacaatactgtttactcgatattctttaattacttggatccctaacctgtaatgctaatttggttcctcttgcctttcatgtttcatatggatagtgcacacaatactgtttactcgatattctttaatgacttgacatttagacacatttgataatttacaacagtgcccaaaactgacaaagtatattgagctcattcagtaggtacatgtaaggctggaatactagttatattattctaaattacttattcaatacaccacagtgagtttatgttttcactaaggggaagtggtaggactgggttcatgatttgttaatttgttgctcatgcaggtgatgaagacaaaaatgtagagataaagttgaagacattcgggccagaacaatctaaaggaccaatattcgttattgtgaatgcttgttctagcagggattacactaaaaatattgttggtgtttgttttgttggccaagatgtcacaggacaaaaggtggtcatggataaatttatcaacatacaaggggattacaaggctatcgtacacaaccctaatcctctcatacccccaatatttgcttcagatgagaatacttgttgttcggagtggaacacagcaatggaaaaactcacaggatggtcaagaggggaagttgttggtaagcttctggtcggtgaggtctttggtaattgttgtcgactcaagggcccagatgcattaacgaaattcatgattgtcctacacaacgctataggaggacaggattgtgaaaagttccccttttcattttttgacaagaatgggaaatacgtgcaggccttattgactgcaaacacgaggagcagaatggatggtgaggccataggagccttctgtttcttgcagattgcaagtcctgaattacagcaagcctttgagattcagagacaccatgaaaagaagtgttatgcaaggatgaaggaattggcttacatttaccaggaaataaagaatcctctcaacggtatccgatttacaaactcgttattggagatgactgatctaaaggatgaccagaggcagtttcttgaaaccagcactgcttgtgagaaacagatgtccaaaattgttaaggatgctagcctccaaagtattgaggatgggttagtattctgaacttacctttttctttaactttaatgaatactgatccacactaatgtctctgtgtttgggataacatctgagaatggcatatgatatcccgttgtgctcttgaaaaaatgtatgttttgtgatcctctcctttctttaccttgtgctaagactaggtgttgtttggtgtttcagttggcactaaccgttaacctaagcatggatggaaaataaggaattagagaagtccgtcagactgacagctctggttcactgtattcatttatctgaaaagttctcttgccatgtaaattttatccttttttagattaatgcctgtattctgtgcatgtgggccttttatgggaatttagtttactgtcagaacccttcttgtcattgcagaaatgaactaaaactagttgcccaagtgtagatatcaagcataaaattcatgctaatatctatattgctagtatcctaagtacattgccgtcctcaacagcttaaccttttggccaaaatggttgttgcatgaaagtcgacatcaagcagcttactctaaaaatgccattgccaccctttactcttgtttcataaatatggtaactatttcttgtaaatgctgctgtacactttacttgtttgaaattttggagatcattctggtttccttgcatcacttgatcaattcctctcagctgcatttattgacaatgaatgtgcaatgcttttatcctgaggaagtcactactccctctggttccataattcttggtgttttggacaatgacacggtctccgaaatatatctttgagtatatttttctattataatacttcctccgtcccaaattaagttaatatagtacgggatgtgacatatcctagtagtaccaaagtccaagcatagcctaatctagcatagttccaaataggaactcatggctctgtgatgtatttttcttgtgtcatttacttggtgtaatttcattctaggtagaagcattgtgtgactttttcgtgtgctgagacatttgaactcactgctaaatttgacgccttattagtattttaacaaatgattagctgaaagcttatttgttttttgtgtttattaagcagctctttggtgcttgagaaaggtgaattttcactaggtagtgttatgaatgctgttgtcagccaagtgatgatacagttgagagaaagagatttacaacttattcgagatatccctgatgaaattaaagaagcctcagcatatggtgaccaatatagaattcaacaagttttatgtgactttttgctaagcatggtgaggtttgctccagctgaaaatggctgggtggagatacaggtcagaccaaatataaaacaaaattctgatggaacagacacaatgcttttcctcttcaggttagctatttatcttcattttcaataccagaaggcaatacatattctcacgcaggaatttcttgtgttgaatttggtagaggacaagttaaatatttggttaaatttatattcgttggtcatatttgctgtagcactctaggtaatatttgtgtttatcctgaactattgatgctctacctacagacactacaaaaaatagattatcctaaataagatctcctacatatcaaacatatgtattatccctgtacatatctgatagactgaagaccccacctatttaagtataaatatatgcaaaatatatgtgtcatgggttggctggtcactctctttgagtaaatttggaagataataaaatacacttggtttattttctttgagtaagtgacataaaacgctaggttttggggccttagtaacacaaacccccaagttttgcaatttgtgtcaaagaacccaaggctttgaggcaaaatgctttataaagccctagatttatatacaaaacacttacacgccattataatgaaccaaatttcaactgtatacttacatagatacgcattcctaatcctaccgtgtagtctatttccttccccactctcctactgaatgaatacacaatggcaaactccagttacaaagaccagggccgtctccaggatatgggggccccagaacaaaatgcaaattgagaccctaaatttttaaaaaataatgtgtcattttcagttattatataactttaatatgtgttatttcgtatgatatttagtacttcctccgtttcaggttataagactttctagcattgcccacattcataaatatgttaatgaatctagacatatatatatgtcaagattcattaacatatatatgaatatgggcaatgctagaaagtcttataacctaaaacggaggtagtaatatattttcaaatattaatggtacaagagtaaaggtagtactaaccttatgttccagtgtaaagcatcatctgctgaggatttgaggacttcctgttttataaaaagggagaagacgttcacattacttttgattcgataattatcaatccaatggaatgatggatcattcaaaatactgtaacagtgtaacttcattagccttgattcaaattagtaatcagtaaattatcgattccgagtaccaactagagctaggcctcgcagcctcgtcgccgctcgccgttcccattgctccgcttggcaacatcggcgttgtgctgcctgctgccgtgaggcgtaatgctgtcgctgccgcctgctgtgctgcacacacgcagcaagtcgcgtctctccacgagtgaacactaaaaagtaaacagttaagacggagcgacatatgtcttccgcctgggcacctagcgtagctcctgatctagggccaggctgcaggcctactccgaggcgggggcccccaaaaatagggggccttgtgcggccgccgtgctcgcacatggccttagacggccctgacaaagacatgttaactgggtacataaatgcacaaacagtcatgccgtcaacatcgatacttgtcgagtaggcggctaatgcacaaacagtcaaggtactactgaaaaaactaccacatactattttgtacagctattatgcataaattccatagctagctggttgatgttgacacaaaatggggttctgtgaaacatttgggcccaaaacctgggttagttgaaataaattgcaaaatctgggttcttatgttactagtaccacactaccactaaaactgcagatttatgaaatctaccttatgtataattaagcctcctaggctcttaggaactgctgctaacaaaatagtagagatatgataggattttgacaataggtaacaaatactaagaacaaggaaactagagatggtatgatcaattaaacttggtccttatctgttgaagatggtgttggaactttatcttagtgatgccagctaggaagccctcatacctgctgctaggtgctacagtacgctactgttcaccggtgtccatggctagcacaccctcatggttccccccccctccaaaaaaaaaaaagattagttattacagcatgtaccttcgttgtaatggtgttgtaaataataaaatatcaacaattatttcttggtgttggagtattaaacgtgtgacactggtcaccaaggtgaatgatgcttaaaatttggaattttttaattgtctgcactagttcgtgttgttacttatagtatagagaacctaatgactcggcagggaggaccacaaactgatcgcttaccatctatctggttctgcaggtttgcctgtcctggcgaaggccttcccccagagattgttcaagacatgtttagtaactcccgctggacaacccaagagggtattggcctaagcatatgcaggaagatcctaaaattgatgggtggcgaggtccaatatataagggagtcggagcggagtttcttccatatcgtacttgagctgccccagcctcagcaagcagcaagtagggggacaagctgatatggtgtatgctcgtcgctaacctcgcataactattcggtcaaccaggtgacctgggatcttctgatggagaacccagtttatgagagttccagaaaccaacatttcgtccactctgatgaagcacatctgaactttggaacggcatcggtgattctcggtgtcgaggtggtccctccagtctcctgattcctggcatgcccgactgtaagttcagctttggacgatgttgttctattagagttctatggcggcaagcaatgcacactgacggtcatgtaactcgtagcataggcccactaccacttggttgaagtacatatatgttctaaaagctgccatgtatataacatcggttatatatgtactacgtgcataaggagagctgtgcagctcccagggtggtattttgtagggcttcccaagcctatgacatcttatt</dnaseqindica> 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| External Link(s) |
