Difference between revisions of "Os07g0596300"
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===Expression=== | ===Expression=== | ||
| − | + | FH5/RMD encodes a formin-like protein consisting of an | |
| + | N-terminal phosphatase tensin (PTEN)-like domain, an FH1 domain, and an FH2 domain. | ||
===Evolution=== | ===Evolution=== | ||
Revision as of 14:07, 6 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
formin homology 5 (FH5), a type II formin mutated in rice morphology determinant (rmd), plays a crucial role in determining rice (Oryza sativa) morphology.
Expression
FH5/RMD encodes a formin-like protein consisting of an N-terminal phosphatase tensin (PTEN)-like domain, an FH1 domain, and an FH2 domain.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os07g0596300 |
|---|---|
| Description |
Actin-binding FH2 domain containing protein |
| Version |
NM_001066706.1 GI:115473144 GeneID:4343793 |
| Length |
6892 bp |
| Definition |
Oryza sativa Japonica Group Os07g0596300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:24926636..24933527 |
| Sequence Coding Region |
24927271..24927363,24927449..24927588,24927919..24927985,24928076..24928144,24928599..24928715 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:24926636..24933527 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:24926636..24933527 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcttttggagcacaaacacgaacttttgtccctcctcctccaccccctcctccacctcctaggtcaggtgttggtgggaatactccacctgcacctcctcccccgcctctaaggtcaactgttcctgctatttctccacctccgccaccacctcctccaccactgaaaccaagttctggtgctccatgcccacccccacctccaccgccaccgccacctccccctccctcagccccatcctctcgagcattttcaagtgctcctccaccgccaccaccaccgcccttgttacgatccgttccacctcctcctccaccaccgccaatctcacactctaatgctccaccaccacctccacttccagctgcacgctttaatgctccgccaccgcccccaccacctccaacaacacattttaatgcccctcctccaccgccaccaccgcctatcacacgttcaggagcaccaccttccccacctccaccccctagccctccacctccaccaccacctccaggtgcacgtccaggtcctccacctcctccaccacctccaggtgctcgcccaggtcctccaccacctccaccccctccaggtggtcgtccaagtgctccacctcttcctcctccaggtggccgtgcaagtgctccacctcctccaccccctccaagcacacgtcttggagctccacctcccccgccaccacctggagctggtgggcgagcacctccaccaccgcctgcccctgggggaaggctcggtggtcctcccccacctccacctcctggtggacgtgcaccacctcctcctagaggaccaggagcaccaccacctccaggaggcaatcctagtagtttaataggtagagggcgtggggtggtacgtgcttcaggatcaggttttggggctgcagctgcacgtaaatcaactttaaagccattacattggatcaaggtgactagagctttgcaaggaagtctatgggaagaattacagcgaaatgatgactcacagagtgtttcggagtttgatttgtcagagctggaaagcctttttccagcagctgttccaaaaccgaatgacagctctaaatctgattcacgtagaaaatcgcttggttcaaagccagaaaaagttcacctaattgagttgaggagggcaaacaacacagagatcatgctgacaaaagtgaagatgccactgccagatttggtgagtgcggctttggcactggaccaatctaccttggatgttgatcaagtggagaatctcataaagttctgtcctacaaaagaagaaatggaacttctcaagaattacactggagataaggaaaatctgggtaaatgcgaacagttcttcctagaattgatgaaagtgccacgaatggagtcaaaactgcgggtgttctccttcaagatccagtttggttcgcaagtcgcagatcttcgaaaaagtttgaacaccatagactcttcatgtgatgagattcgaagttctctcaagttaaaagaaatcatgaagaaaattctcctccttgggaatacattgaaccagggtactgctagaggtgctgcagttggcttccggttggacagtcttctaaaactaacagatacccgagcaacaaataataaaatgacacttatgcactacctctgcaaggtacttgctgcaaaatcatcacagcttctggacttctacatggatcttgttagtttagaagctacatcaaagatacaactaaaaatgctggcagaagaaatgcaagcggttagtaaagggctggaaaaggttcagctcgagtataatgcttcagaaagtgatggtccagtatcagagatttttcgtgagaaactgaaagaattcactgacaatgctggagctgatgtgcaatctttgtcttcattattttctgaagtgggaaaaaaggctgatgcactgattaaatatttcggcgaagatcctgtacgctgcccttttgagcaagttatctccaccctcttaacatttgtaacaatgtttcggaaagcacatgaagagaaccgcaagcaagctgagctcgataagaaaagggctgaaaaagaggcagaagcagaaaagtctaaagcacagttggctagtaaaaatgactctaaaccatcaaatccaagccggcaagtgaaacaaacgccagatactaaaacaagagctgcaagcagacgaggaaaagatgtaggttga</cdnaseq> |
| Protein Sequence |
<aaseq>MSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAPPPPPLRSTVPA ISPPPPPPPPPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPPPPPPPPLLRSVP PPPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSP PPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAP PPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRLGGPPPPPPPGGRAPPPPRGPGA PPPPGGNPSSLIGRGRGVVRASGSGFGAAAARKSTLKPLHWIKVTRALQGSLWEELQR NDDSQSVSEFDLSELESLFPAAVPKPNDSSKSDSRRKSLGSKPEKVHLIELRRANNTE IMLTKVKMPLPDLVSAALALDQSTLDVDQVENLIKFCPTKEEMELLKNYTGDKENLGK CEQFFLELMKVPRMESKLRVFSFKIQFGSQVADLRKSLNTIDSSCDEIRSSLKLKEIM KKILLLGNTLNQGTARGAAVGFRLDSLLKLTDTRATNNKMTLMHYLCKVLAAKSSQLL DFYMDLVSLEATSKIQLKMLAEEMQAVSKGLEKVQLEYNASESDGPVSEIFREKLKEF TDNAGADVQSLSSLFSEVGKKADALIKYFGEDPVRCPFEQVISTLLTFVTMFRKAHEE NRKQAELDKKRAEKEAEAEKSKAQLASKNDSKPSNPSRQVKQTPDTKTRAASRRGKDV G</aaseq> |
| Gene Sequence |
<dnaseqindica>6165..6257#5940..6079#5543..5609#5384..5452#4813..4929#4642..4713#4153..4247#3336..3417#3101..3232#1986..2027#1815..1913#1664..1735#1324..1450#42..1060#gcttgtcaagcattcctcctcctccccctccacctccacttatgtcttttggagcacaaacacgaacttttgtccctcctcctccaccccctcctccacctcctaggtcaggtgttggtgggaatactccacctgcacctcctcccccgcctctaaggtcaactgttcctgctatttctccacctccgccaccacctcctccaccactgaaaccaagttctggtgctccatgcccacccccacctccaccgccaccgccacctccccctccctcagccccatcctctcgagcattttcaagtgctcctccaccgccaccaccaccgcccttgttacgatccgttccacctcctcctccaccaccgccaatctcacactctaatgctccaccaccacctccacttccagctgcacgctttaatgctccgccaccgcccccaccacctccaacaacacattttaatgcccctcctccaccgccaccaccgcctatcacacgttcaggagcaccaccttccccacctccaccccctagccctccacctccaccaccacctccaggtgcacgtccaggtcctccacctcctccaccacctccaggtgctcgcccaggtcctccaccacctccaccccctccaggtggtcgtccaagtgctccacctcttcctcctccaggtggccgtgcaagtgctccacctcctccaccccctccaagcacacgtcttggagctccacctcccccgccaccacctggagctggtgggcgagcacctccaccaccgcctgcccctgggggaaggctcggtggtcctcccccacctccacctcctggtggacgtgcaccacctcctcctagaggaccaggagcaccaccacctccaggaggcaatcctagtagtttaataggtagagggcgtggggtggtacgtgcttcaggatcaggttttggggctgcagctgcacgtaaatcaactttaaagccattacattggatcaaggtgactagagctttgcaaggaagtctatgggaagaattacagcgaaatgatgactcacagaggtatatccttttgattaaaattcttcctccatttgaccatgcttattgatatatgcacataaatttcaatgatgtgattggctgattgctgtaaggcttcatccaggatttgtaaataatttggtgtcatgattgtagcattgaattttctacaattcagttgctaataatctcgtacaatctactccacaaagactggctcaatatttgtgatgcttttttactaggttttgccttaatgtttgtcaatttcttttctgcagtgtttcggagtttgatttgtcagagctggaaagcctttttccagcagctgttccaaaaccgaatgacagctctaaatctgattcacgtagaaaatcgcttggttcaaagccagaaaaagttcacctagtaagtacatgctaattttaatttcctttctaatttgtatcagtgatcaaggtcagaaagacactagatttgttggacatttaagttatgacaaatgtgttacatgatctcattatcatatcacaaaactatgcaaacagtctcaagaacctgtatttattagactttgtaaatgaccatgttacaatagtcttaacacttttatgtgattagattgagttgaggagggcaaacaacacagagatcatgctgacaaaagtgaagatgccactgccagatttggtggtaattatcttataaaacaagcaaagataatggtaacatgattgattttttatatcttaatggcttaaattttctctagagtgcggctttggcactggaccaatctaccttggatgttgatcaagtggagaatctcataaagttctgtcctacaaaagaagaaatggaacttctcaaggtaatacaatgtttggccttgttgtgatctcatctgaaaactatgttggcttactgtctcgtttttttccagaattacactggagataaggaaaatctgggtaaatgcgaacaggtaatggttatttgccatctagtcatctagtggaattagaatatttgcccattgttactggaattagaatatttgcccattgtgctttattatatattagtcctgtcagcacacataaaaacacattttttgggtcttaattggagattttggcaattttagaatgaaacacaatggtcagagtttaaatgtacataaaacagtcttctggttcctctgcttgataactaatatccctgtttttaacatcaactcaaaacagggtggatactgtgtagaagaggccgtatgatatggctcgataataaactggcaatttggcataggagaaaaatggcactatagctagagaaaagctgaacacagcagatatagatggcatagtgagcagaggctaaatttttgttaagagtgtaggaaatagggtggggggaaactttgtttagctcttacttctaaaatgaatgggcatggtttaaggataactggcacgagagtataaaggtgcacaatagaagaatggaacatctacagagatagatggaaggagcagaggctaaattcatgaacgaatctcctacctcttaaatagataagcctaagaaatagtgctttggataagacgacaactaaataacttctactctctccgtttcatattataagtcgctttgacttttttcctagtcaaacttctttaggtttgatcaagtttatagaaaaatttagcaacatctctaacaccaaattagtttcattaaatgtaacattgaatatattttgataatattttttttgtgttgaagatgttgctatatttttctataaacttagtcaaactaaagtcaaatcgacttataatatgaaacggagggagtaccaatcaaccaattagttatttgtttattttcgttgcttggccttgcaagtatttgatggcctggtcagtccacattcactaaagacattaccttttacattttgagtttttaaagcaaaatggtctcaggtgttatacgtttatgccagcttggtagatccgtatgcattaaacaattattttcctgctgcagttcttcctagaattgatgaaagtgccacgaatggagtcaaaactgcgggtgttctccttcaagatccagtttggttcgcaagtcgcagatcttcgaaaaagtttgaacaccatagactcttcatgtgatgaggttcatttataatcgggattagttttttagcaatcaatattgcttcttatgtaatttatactaagtcgaattcctgttttctaaaaaatatctgcatcatcagattcgaagttctctcaagttaaaagaaatcatgaagaaaattctcctccttgggaatacattgaaccagggtactgctagaggtacaacaactgcattttctctgttacactcaatttagttggtcacattatctttagttattcgttggcatatgaaatgcagctgcatttatgtctaccagctctgcaattttactggcttcttgctaggcagaaatgaagagattgacattgaagttttcctgcaacatgtttaatctctaaaataggaatctttcccacaagttcttttttctttttcttttgttgtttgtttgtggtgtatttttaaaatcattgtgaggaagtgggggcatgtgtgttgagtcttgtaaatattctctccttaatgcaatgatatgcagttctcctgcatatttgagaaaaaaaaataggcacggtgtttttgttggaacaaaaagattgtgcatcctaggaagaatgaataatcaatttaggctgataattcctccctttcttttggagtataggcaacatcctagtttctgaaaaacccatagtaatgcgaccgatgtttctaatttaaatcaattatcaccaccacaaatacaggagtatgtagggctactgatggcttttctcgttcttctagagttcataatgataggttacacatttggtaacattcaaattgtttgttagttcagttgtttctttacactggggcatccttttgattttctttagttaattggttatatattagactattagtactgttcttggatagtttcacatttgttggtttgcttacaggtgctgcagttggcttccggttggacagtcttctaaaactaacagatacccgagcaacaaataataaaatgacacttatgcactacctctgcaaggtacgccttaaacaattcctgttccgctaggttgtcgaaagtgaacatggtagcttttcaccaatagtttacctgcttaactgtaaatcaagtttggactgcatcaaataattttattcaaatcaggaccctgaagtcaatttatttgatggtggaaactgtgagttcatgatttgcatgtcatgttgtaagcaaatatatatacaatgatgcacttccacttaatttattctgtaacaaggttatattactatattctacgatgacttatagtttgagtatctggccataacttctttatagtcctggttaagttcacatttgcttgagttgaaatgattttacatcagtatctatcttgcgtacaccctaacaaaagaaaatgtaatatcaggtacttgctgcaaaatcatcacagcttctggacttctacatggatcttgttagtttagaagctacatcaaaggtttgagttttcttttactattctatcaatcttgtagcatatataatttatttactttcgatatgtatatgctgttctaatcggtgttttcctgaacagatacaactaaaaatgctggcagaagaaatgcaagcggttagtaaagggctggaaaaggttcagctcgagtataatgcttcagaaagtgatggtccagtatcagagatttttcgtgaggtcaaggatctaccccattttgacttatttctgacgtatttaaatattaagttggttccttttagtggattacactacctgctatgtggactaaaattagtaatttcttccccagaaattctacaaaaacgttatccaggcttgttaacagttttttcatgtgcttgttttatgattgtcatctggatgtgcttctcagacagcattacatcaattttactgggacatgcccaaatgagaatctaatatacaatagtaaaagagcctctattggtgatacacctgttactcaagacagatgtacacgtctgatatatatacatgggttactgataaacccgttgtttcaatcaatctgacatgtgaacctgatttaaaagttactttctatttgtgtaaagctgaagagtaaaaatcccgttagttctaaatcggtattgtttgcactgttcagaaactgaaagaattcactgacaatgctggagctgatgtgcaatctttgtcttcattattttctgaagtggtatgtttttgttttcttatatgaagaggaatgcatgctattaacccacattccttctggccttgattatttgttgcattattttgtcagggaaaaaaggctgatgcactgattaaatatttcggcgaagatcctgtacgctgcccttttgagcaaggtaagaatttttatgatcaatgtgacttatttctaaggttgtgcattcagcattttctttttccgagtacctgtcaaggatcaagatactgtcagtcgtgtgagcaccccccactataagcacaaacacattatcatgaaaatcattcttatttaaaatatttcaacccataaatatgtaataccttgcaaagaaacaatttaggataaatcattttctgtagtttgcagctgattgagcatatcttatttctgcattttttatcatcaacatatgtgtttgcttgttttggtatgttgcttaactcttatgttgatcatgatgttgcagttatctccaccctcttaacatttgtaacaatgtttcggaaagcacatgaagagaaccgcaagcaagctgagctcgataagaaaagggctgaaaaagaggcagaagcagaaaagtctaaagcacagttggctagtaaaaatgtattgatccttgacctgtatctttggcaacttcagccaacctcttatatccatcgtatttataaaattcaaaatctgctcacaggactctaaaccatcaaatccaagccggcaagtgaaacaaacgccagatactaaaacaagagctgcaagcagacgaggaaaagatgtaggttgatctccacgaccaactctgttgttgcgcttatgatctgcatgctgggcgaatgcatgacctgctcgatgcacggggagggcaagaaaagttgtgtaaatgatgcagccatcaatggaaacagcatggctgcaccatagcaactgtacatgacgccctttacggtaatgccacatgtgtctgttgcttaacaatacattgataaatgaatcgtataattttctgacaagtttttttttttcttattgcagttcgcactagcgatggccggtttttttctcttcggccagcagggccgcccagtggcaacttctgactgctgtaaagaactaacactaacagcaaagctaacatcattcgttttttcctttgttttttatgttacttgtccattctttctaaccccagtggccaagtgcagccaatgcttcaggagtagagcctcgtagtatcgtagtaggtaggtagaaattgtacaaataggaacagggaaagggtagggaaaccatgtggggcggagaaattgtagctgggatctatacgagatgtaaacatgcgtgtgcttcacgaatatttttttttgtagtgaatgtaccaaggttttcataattagtgaatgcagcagcttttccatgatc</dnaseqindica> 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