Difference between revisions of "Os06g0625900"

From RiceWiki
Jump to: navigation, search
(Evolution)
(Labs working on this gene)
Line 13: Line 13:
  
 
==Labs working on this gene==
 
==Labs working on this gene==
(1)Departamento de Biotecnologı´a, Universidad Polite´cnica de Madrid, 28040 Madrid, Spain (M.A.B., B.G.,A.R.-N.); and Instituto de Recursos Naturales y Agrobiologı´a, Consejo Superior de Investigaciones Cientı´ficas, 41080 Sevilla, Spain (B.C.)
+
(1)Department de Biotecnologı´a, Universidad Polite´cnica de Madrid, 28040 Madrid, Spain (M.A.B., B.G.,A.R.-N.); and Instituto de Recursos Naturales y Agrobiologı´a, Consejo Superior de Investigaciones Cientı´ficas, 41080 Sevilla, Spain (B.C.)
 +
(2)Key laboratory of Molecular Epigenetics of MOE, Northeast Normal University, Changchun 130024 Jilin Province, China
  
 
==References==
 
==References==

Revision as of 15:16, 8 June 2014

Please input one-sentence summary here.

Annotated Information

Function

Potassium transporter 10,It's gene name is OsHAK10.Plants take up large amounts of K+ from the soil solution and distribute it to the cells of all organs, where it fulfills important physiological functions. Transport of K+from the soil solution to its final destination is mediated by channels and transporters. Rice protected young leaves from ion harm via the large accumulation of Na+ and Cl- in old leaves. The up-regulation of OsHKT1;1, OsHAK10 and OsHAK16 might contribute to accumulation of Na+ in old leaves under salt stress. A comparative kinetic analysis of HAK-mediated K+ influx in yeast and in roots of K+-starved rice seedlings demonstrated the involvement of HAK transporters in root K+ uptake.All HAK transporters may mediate K+ transport, but probably not only in the plasma membrane. Transient expression of the OsHAK10-green fluorescent protein fusion protein in living onion epidermal cells targeted this protein to the tonoplast.

Expression

Please input expression information here.

Evolution

QQ图片20140608222722.jpg You can also add sub-section(s) at will.

Labs working on this gene

(1)Department de Biotecnologı´a, Universidad Polite´cnica de Madrid, 28040 Madrid, Spain (M.A.B., B.G.,A.R.-N.); and Instituto de Recursos Naturales y Agrobiologı´a, Consejo Superior de Investigaciones Cientı´ficas, 41080 Sevilla, Spain (B.C.) (2)Key laboratory of Molecular Epigenetics of MOE, Northeast Normal University, Changchun 130024 Jilin Province, China

References

Inventory and Functional Characterization of the HAK Potassium Transporters of Rice Marı,, a A. Bañ, uelos, Blanca Garciadeblas, Beatriz Cubero, Alonso Rodrı,, guez-Navarro Plant Physiology, 2002, 130(2): 784-795

Structured Information

Gene Name

Os06g0625900

Description

Potassium transporter 10 (OsHAK10)

Version

NM_001064651.1 GI:115469033 GeneID:4341573

Length

4353 bp

Definition

Oryza sativa Japonica Group Os06g0625900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26115342..26119694

Sequence Coding Region

26115342..26116097,26116211..26116617,26116746..26117000,26117099..26117222,26117336..26117388
,26117473..26117733,26118735..26118788,26118880..26119447,26119641..26119694

Expression

GEO Profiles:Os06g0625900

Genome Context

<gbrowseImage1> name=NC_008399:26115342..26119694 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26115342..26119694 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagagcccgtctcccgtggatcctgagtcgccgagttctcccgattgcaagggagggagcagcagcaagaggaggcggctgccatggcggatgacgatgagcctggcgtaccagagcctcggggtggtgtacggcgacctgagcacgtcgccgctgtacgtgtacaaggcggcgttcgcggaggacatccagcactcggagaccaacgaggagatcctcggcgtgctctccttcgtcttctggacgctcaccctcgtcccgctcctcaagtacgtctgcgtcgtcctccgcgccgacgacaacggcgagggcggcaccttcgccctctactccctcctctgccgccacgcccgcgccgcgctcctcccgcctggcggcggcggcggcggcggcgagccgggcgacgaggaccagttcttggacgcgggcgccgacaagaaagccgcggcgaacggcaatgcgctggcgctgagcgggcgcggcggcggaggcggcgccgccgccggcgtgaggaggctgctggagcggcacaaggtgctgcagcgcgtgctcctcgtgctggcgctggtgggcacgtgcatggtcatcggcgacggcgtgctcacgccggccatctccgtgttctcggcggtatccgggctggaattgtccatggaaaagcatcagcacaaatatgtggaggttcctattgcttgttttgtactggtttgcctgttttgtctgcaacactatggtacacaccgggtggggttcctttttgcaccaattgtgattacatggcttctatgtataagcatgattggtgtttacaatatcgtgcattgggagcccaatgtctatcgagcgttatctccatattatatgtacaagtttttgaagaagacgcagagaggaggttggatgtcactgggaggaatattgttatgtatcactggttctgaagcaatgtttgcagatctggggcattttaatcagctgtcgatacagattgcttttacttgcatggtttacccatccttgatccttgcatacatggggcaagctgcttatctgtgtaagcatcacatcattgaaagtgactacaggatcgggttctatgtgtctgtgcctgagaaaattaggtggccagttctggcaattgccattcttgcagcagttgtcgggagccaagctgttatcactggcacattctcaatgatcaagcagtgcaccgctctcggctgctttcctcgggtgaagatagttcacacatctgacaaagtacacgggcaaatttacatccctgagatcaattggatcctgatgatactgtgcttagctattaccattggtttcagagacacaaaacacctgggcaatgcgtcaggattggcggttataaccgttatgctggtcacgacatgtctgatgtccctggtgatagttctgtgttggcacaagagcatcttcctcgcattcggcttcatcatcttcttcggcaccattgaggcactctacttctcagcatcactcatcaagttcagagaaggagcctgggtcccaattgtgctggccttcatcttcatggcgataatgtgcatctggcactatggcaccatcaagaagtatgagttcgatctccagaacaaggtctccatcaactggctccttggcctcagccccaacctcggcattgtccgagtccgcggcatcggcctcatccacaccgagctcgactctgggatcccggcaatcttctcgcatttcgtcaccaacctacctgcatttcatcaagtgctcatcttcctctgcatcaagaacgtcccgataccgcatgtctcgccggaggagaggttcctcgtcggaagaattggccccaaggagtacagaatctaccggtgcattgtcaggtacggctaccacgacgtgcacaaggacgatcaggagttcgagaaggagctcgtctgcagcgtcgcggagttcatccgctccggcgccgccgccgcggccgacgccgcggcctcttccaagcccaagaacgtctgcggcggcggcgcggaggagtcggagaaagaggaggaggagcggatgtccgtcatcccctccggcagcattcggatgatggaggaggacggcggcgcgggggcgccgtcgtcggaggacaccgtcggcggcagcggcagcggcagcggcagaggcagctcgcgcggcggcggcggcgcaagggagatcatgtcgccgtcgccgtcgccgccgccggtggtggtggcgccgaggaagagggtgcggttcgtgctgccggcggcgagcccgcggccggacgccggcgtgcgggaggagctgcaggagctgatggacgcgcgcgaggccggcatggcgttcatcctcggccactcctacgtcaaggccaagagcggctccagcttcttccggcggctggtcatcaacttctgctacgacttcctccgccgcaacagccgcggccccaactacgccgtcaccatccctcacgcctccaccctcgaggtcggcatgatttactatgtctaa</cdnaseq>

Protein Sequence

<aaseq>MKSPSPVDPESPSSPDCKGGSSSKRRRLPWRMTMSLAYQSLGVV YGDLSTSPLYVYKAAFAEDIQHSETNEEILGVLSFVFWTLTLVPLLKYVCVVLRADDN GEGGTFALYSLLCRHARAALLPPGGGGGGGEPGDEDQFLDAGADKKAAANGNALALSG RGGGGGAAAGVRRLLERHKVLQRVLLVLALVGTCMVIGDGVLTPAISVFSAVSGLELS MEKHQHKYVEVPIACFVLVCLFCLQHYGTHRVGFLFAPIVITWLLCISMIGVYNIVHW EPNVYRALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFNQLSIQIAFT CMVYPSLILAYMGQAAYLCKHHIIESDYRIGFYVSVPEKIRWPVLAIAILAAVVGSQA VITGTFSMIKQCTALGCFPRVKIVHTSDKVHGQIYIPEINWILMILCLAITIGFRDTK HLGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAFGFIIFFGTIEALYFSASLIKF REGAWVPIVLAFIFMAIMCIWHYGTIKKYEFDLQNKVSINWLLGLSPNLGIVRVRGIG LIHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIKNVPIPHVSPEERFLVGRIGPKEYR IYRCIVRYGYHDVHKDDQEFEKELVCSVAEFIRSGAAAAADAAASSKPKNVCGGGAEE SEKEEEERMSVIPSGSIRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMS PSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAK SGSSFFRRLVINFCYDFLRRNSRGPNYAVTIPHASTLEVGMIYYV</aaseq>

Gene Sequence

<dnaseqindica>3598..4353#3078..3484#2695..2949#2473..2596#2307..2359#1962..2222#907..960#248..815#1..54#atgaagagcccgtctcccgtggatcctgagtcgccgagttctcccgattgcaaggtatgggttgggtggtggaggtcgtgtcatgtttgatggttaatggtctaatcttgtcgggtttgcgagggttgtggtggtcgtgattgattgattgatcatggtgttgttgaatcttggtgcgatcttggattctttgctaatgtgtgtgtgcgcgtgtgatttgatttgggtgggtggatggatggagcagggagggagcagcagcaagaggaggcggctgccatggcggatgacgatgagcctggcgtaccagagcctcggggtggtgtacggcgacctgagcacgtcgccgctgtacgtgtacaaggcggcgttcgcggaggacatccagcactcggagaccaacgaggagatcctcggcgtgctctccttcgtcttctggacgctcaccctcgtcccgctcctcaagtacgtctgcgtcgtcctccgcgccgacgacaacggcgagggcggcaccttcgccctctactccctcctctgccgccacgcccgcgccgcgctcctcccgcctggcggcggcggcggcggcggcgagccgggcgacgaggaccagttcttggacgcgggcgccgacaagaaagccgcggcgaacggcaatgcgctggcgctgagcgggcgcggcggcggaggcggcgccgccgccggcgtgaggaggctgctggagcggcacaaggtgctgcagcgcgtgctcctcgtgctggcgctggtgggcacgtgcatggtcatcggcgacggcgtgctcacgccggccatctccggtgcgtgcgcgcccccgcttgatttgctggcttgtttgtgttcttgggttgtcgtgtgctgattttcagatggcgtgttctgtttttgcagtgttctcggcggtatccgggctggaattgtccatggaaaagcatcagcacaaatgtaaggatctgaacacccaaccatgcctttgtcccttccattgtttctgtcttttgatatgattgtagatttgtcttcctcatcttgttaactactgtttcctggatcatcatgttctgagtttttttagataattcagggtccacctcaaactcaaaagggtgcagtttcttgtttttttagttgaaaaaagtgtgcagtttcagtcatactagtgcaccacaattcgagtaaattttacctgtaagatgcacgcaagagatggattctgtgcaatttggtgttcgtaaaaccaggaattatgttaactgatgaagtctgaacagtttgcttcaatgggattgatacttttggaagtttccgtgcgagcttatcggctcagatatcagatgatcaattgcgtgccaaattcatttaggaaggtctttgacagggaatgaccatgagcaacgcagcgttgtcgcatggacaccaacaatcaactccgtactgttgttagtcaatgtatgcctaacagttgttgctataatgctattagcctacgaactggagaagattaatactcttatctagtagcattgatgactacaataaatggaactaccctactcaagcagttgtgattcttgtgaagaactgtagtgggaaacagaaagaaaagatttgagcgattcctaaataagccggtcatcatctaaattactgtatctgttcagttcatattctcttgggctttggcagaggatagagttcactctgggcagaaatatggtcagctagtggtaataaggttcggaaattctggaaaatggaagctacacatgctgaaagtaataaaataagtgctgaattctgaagtgcggagtaaagaaactctattttgacttttaatcatttaagcatgtgcttttattctgattcttgttttgctaatatgttttgtttcttttttaacccattactaactgtgcaaagttttttttactgatttgaatctgcagatgtggaggttcctattgcttgttttgtactggtttgcctgttttgtctgcaacactatggtacacaccgggtggggttcctttttgcaccaattgtgattacatggcttctatgtataagcatgattggtgtttacaatatcgtgcattgggagcccaatgtctatcgagcgttatctccatattatatgtacaagtttttgaagaagacgcagagaggaggttggatgtcactgggaggaatattgttatgtatcactggtactatgatcaacaaccattttctaccatatgccaatgatctctgaagtgtacaactttactaacttgagtgttgtttttcaggttctgaagcaatgtttgcagatctggggcattttaatcagctgtcgatacaggtgatgaaatagagtgcaatctcaatgttttgttttacttggtttcatcatagtagcaatatgcggacatgcggtcaatagttttgtctctgataagcatttcctgattgcagattgcttttacttgcatggtttacccatccttgatccttgcatacatggggcaagctgcttatctgtgtaagcatcacatcattgaaagtgactacaggatcgggttctatgtgtctgtgcctggcaagtcatgttctccagatctttcatcaacagcgaaatcgatattatatcattctcctagtactgtttattaatatttaaaagttttccatcctcagagaaaattaggtggccagttctggcaattgccattcttgcagcagttgtcgggagccaagctgttatcactggcacattctcaatgatcaagcagtgcaccgctctcggctgctttcctcgggtgaagatagttcacacatctgacaaagtacacgggcaaatttacatccctgagatcaattggatcctgatgatactgtgcttagctattaccattggtttcagagacacaaaacacctgggcaatgcgtcaggtatgtaccacttgttttagtttttgacatatcaaaccacctgattattccatgttcgaattacctatgcatactgaagctaatgagtaaggaatttgtctgatatgcaatagttgtcctttgaacaggattggcggttataaccgttatgctggtcacgacatgtctgatgtccctggtgatagttctgtgttggcacaagagcatcttcctcgcattcggcttcatcatcttcttcggcaccattgaggcactctacttctcagcatcactcatcaagttcagagaaggagcctgggtcccaattgtgctggccttcatcttcatggcgataatgtgcatctggcactatggcaccatcaagaagtatgagttcgatctccagaacaaggtctccatcaactggctccttggcctcagccccaacctcggcattgtccgagtccgcggcatcggcctcatccacaccgagctcgactctgggatcccggcaatcttctcgcatttcgtcaccaacctacctgcatttcatcaagtaatcttgctcatcagccatcattcctcgccttctgaagttgttgtcattgttcagaaattcagaattttggttacagtgctcatcatcttcttcttcttgatgatgatcaggtgctcatcttcctctgcatcaagaacgtcccgataccgcatgtctcgccggaggagaggttcctcgtcggaagaattggccccaaggagtacagaatctaccggtgcattgtcaggtacggctaccacgacgtgcacaaggacgatcaggagttcgagaaggagctcgtctgcagcgtcgcggagttcatccgctccggcgccgccgccgcggccgacgccgcggcctcttccaagcccaagaacgtctgcggcggcggcgcggaggagtcggagaaagaggaggaggagcggatgtccgtcatcccctccggcagcattcggatgatggaggaggacggcggcgcgggggcgccgtcgtcggaggacaccgtcggcggcagcggcagcggcagcggcagaggcagctcgcgcggcggcggcggcgcaagggagatcatgtcgccgtcgccgtcgccgccgccggtggtggtggcgccgaggaagagggtgcggttcgtgctgccggcggcgagcccgcggccggacgccggcgtgcgggaggagctgcaggagctgatggacgcgcgcgaggccggcatggcgttcatcctcggccactcctacgtcaaggccaagagcggctccagcttcttccggcggctggtcatcaacttctgctacgacttcctccgccgcaacagccgcggccccaactacgccgtcaccatccctcacgcctccaccctcgaggtcggcatgatttactatgtctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0625900, RefSeq:Os06g0625900