Difference between revisions of "Os06g0712700"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
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MADS6在功能上与B类基因SUPERWOMAN1/MADS16或C类基因MADS3冗余，确定了三轮和花分生组织。MADS6通过与D类基因MADS13相互作用来决定心皮/胚珠的发育，并和YABBY类基因DROOPING LEAF一起控制内稃和花分生组织。表达分析显示，在mads6-1突变体中， 在花发育早期，6个B-，C-，E-类基因的转录水平下降，表明MADS6是花发育早期的关键调节因子。此外，MADS6能直接与C类基因MADS8中调节基序相结合，mads6-1 mads58 双突变体的表型与mads6-1的表型相似。 | MADS6在功能上与B类基因SUPERWOMAN1/MADS16或C类基因MADS3冗余，确定了三轮和花分生组织。MADS6通过与D类基因MADS13相互作用来决定心皮/胚珠的发育，并和YABBY类基因DROOPING LEAF一起控制内稃和花分生组织。表达分析显示，在mads6-1突变体中， 在花发育早期，6个B-，C-，E-类基因的转录水平下降，表明MADS6是花发育早期的关键调节因子。此外，MADS6能直接与C类基因MADS8中调节基序相结合，mads6-1 mads58 双突变体的表型与mads6-1的表型相似。 | ||
Revision as of 07:30, 9 June 2014
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Contents
Annotated Information
Function
MADS6在功能上与B类基因SUPERWOMAN1/MADS16或C类基因MADS3冗余，确定了三轮和花分生组织。MADS6通过与D类基因MADS13相互作用来决定心皮/胚珠的发育，并和YABBY类基因DROOPING LEAF一起控制内稃和花分生组织。表达分析显示，在mads6-1突变体中， 在花发育早期，6个B-，C-，E-类基因的转录水平下降，表明MADS6是花发育早期的关键调节因子。此外，MADS6能直接与C类基因MADS8中调节基序相结合，mads6-1 mads58 双突变体的表型与mads6-1的表型相似。
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os06g0712700 |
|---|---|
| Description |
MADS-box protein SPW1 |
| Version |
NM_001065095.1 GI:115469921 GeneID:4342047 |
| Length |
4370 bp |
| Definition |
Oryza sativa Japonica Group Os06g0712700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:31050629..31054998 |
| Sequence Coding Region |
31050947..31051117,31051241..31051285,31053404..31053445,31053894..31053991,31054161..31054224 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:31050629..31054998 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:31050629..31054998 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggaggggcaagatcgagatcaagcggatcgagaacgcgaccaacaggcaggtgacctactcgaagcgccgcacggggatcatgaagaaggccagggagctcaccgtgctctgcgacgcccaggtcgccatcatcatgttctcctccaccggcaagtaccacgagttctgcagcccttccaccgacatcaaggggatctttgaccgctaccagcaagccatcggcaccagcctttggatcgagcagtatgagaatatgcagcgcacgctgagccatctcaaggacatcaaccgcaacctgcgcaccgagatcaggcaaaggatgggagaagatctggacgggctggagttcgacgagctgcgcggtcttgagcaaaatgtcgatgccgccctcaaggaggttcgccacaggaagtatcatgtgatcaccacacagactgaaacctacaagaaaaaggtgaagcactcctacgaggcgtacgagactctgcagcaggagctggggttgcgcgaggagccggcgttcgggttcgtggacaacaccggcggcgggtgggacggcggcgccggcgccggcgcggcggcggacatgttcgccttccgcgtggtgcccagccagcccaacctgcacggcatggcctacggcggcaaccacgacctgcgcctcggttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVA IIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLR TEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEA YETLQQELGLREEPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQPNLHGMAYGGN HDLRLG</aaseq> |
| Gene Sequence |
<dnaseqindica>3882..4052#3714..3758#1554..1595#1008..1105#775..838#504..570#215..402#gagttgggaatccgttgctgtcgtacgtctcgtctatggcgtgctgtatgtcctctccttctttcttcctttccaaataagcactcctcttcttcctcctcctcctcctccgcctcctcttctcattcccaactcatcgatccatcagtagctagctagctagctagctagctgcattgtccggcgagagagatagctgctgcagggggcggccatggggaggggcaagatcgagatcaagcggatcgagaacgcgaccaacaggcaggtgacctactcgaagcgccgcacggggatcatgaagaaggccagggagctcaccgtgctctgcgacgcccaggtcgccatcatcatgttctcctccaccggcaagtaccacgagttctgcagcccttccaccgagtctgtatctccatctccacttcgactctatgatcttctccatcctgattatactatatatataactgcatcatatcgatcttaattgcatcctgctgcagcatcaaggggatctttgaccgctaccagcaagccatcggcaccagcctttggatcgagcagtatgaggttgatttgtttaatttcttcctttcttcccctccgctagctgcaaccaagctgctcacttcgattctctccttatgatttgttttctcatcttttgctcgattcgtcttctcaattttcactccagtttctttcctttaattctatgtcccaactctcttctgctcgttaattggtttggtttggtttgttttcatccatcagaatatgcagcgcacgctgagccatctcaaggacatcaaccgcaacctgcgcaccgagatcaggccagcacaaatttcacccctttaattactttcctctcttctccttaattaatccctcttagtatatagttactgggggattttagcttgaacaagagatccaaatttacaacgtttttcaagatatgtactgctggatctgaatataaacaaccatacgtgtgtgcaggcaaaggatgggagaagatctggacgggctggagttcgacgagctgcgcggtcttgagcaaaatgtcgatgccgccctcaaggaggttcgccacaggaaggcatgcacgcacgcacgccctaattaaactacgaaccctaatttgctcaatactaaaacgtcgttcaattccttaattcaagggtggtagatccttgtattttgtgcacactagatctacggttcatgatcagatccgtgcatatttcatgcttctcgctacagatctacgagtttcttgaacccttcttggcttcttgcatgtgtggaaattatattgatggtttttaatttggcctcggttgcttgctcgtattaaacaagataattttaaggtttatgctttatagaaacataatttatgtgtactattgttttatcttacaactagtaggatgtatgctcattgatctattggactgtaacatattaaactttctgcttcatgtatcctagccttttaatttgtttcagttttctcatgattaattcggttttaatttctgcagtatcatgtgatcaccacacagactgaaacctacaagaaaaaggtcaggaataagccatgcccattttctcagtatttgtttctggttaaatttatatatatatatatatatatatatatatatatatatatatatatatatatatataccaccaattttattccttcctcttgaaactgttggctataggtgtacatctactgtggattttattccttcccttggaagctgttgactatgtgtgcatctcttgtggatatataggccggatttaatcaatccattatcttaaaaaaaatactgccaatattatgcctaataatgcagcaatattagtatatatatgtatgttcttctggtgcagtaataagggtatatctagatatctgcacaagcctatataagtgtatatttatcttccccaattccttactttaattgcttcacttttgtggccaccatcactgcttaaatttgcttagtttggccaataagttcgcacttgcagtgtcgtctatgttcacatgtctttctgaagagctatatgctatccctttgattgtacgttgttcacatttttcctgacgatattaagttcctccgggtaaaatatacattgatcccgtgaactaaattgcactcacccaataacctgcattttgccttattgcgtgctaatttagccatatacatagccatggatctcccagtttctgtacttgaacagtcgaagctagctaagctagcccttgaatcgatcaaaagccaaaataaaagatctgacaagcaccatgacgcctctcaaccgaaacatgcatgctaatgtacagtgtgcattaccatgcgtgtctgtgcatttccatactatctacacatcaatatatttgatcgaggctacctgatctacacatctagtctaagctatacacatagccatcagtagatgtacatcgatgttaattggagcatgcattgtcatgtgcattcctatacattacatgatgaacaacgcacgcaatataatgcgatctgcgatgcagttttctctgtcttttttgcaagctagaactcatgacaaacagcaaaggacagtagtatgaattgggcatgtatctgcatatatatgcgtatatgtatctcctgttaagcaaacaactaagccaggatcggtagctatataaactagctgtacctagagacgatgaagcatgcatgcttattttggtcccccggctatttaggagagtagcatgtcaaacacggatttttatgagagattgcatcgcggcgtgataccttttggtagataagggacggcattgaggctttatgatttgcaagaatttggaaaccaaaccattacggccgctggcttactgaatctttagtggggtgtactactaattaattactcagcttgaacaaccgagcaaaagcgaatacttttgactttacattcaatcgactttaatagggagtactctttgttcattgttttgtagttttacctgcggttagctggtcagaattaaacatatatatatatatatatatatatatatatatatatatatatatatatatgtagctgaataagtaattcattgcatcgaggggattgttaaccattcatgcatatctaactgtgttgtcggctgaggtgaaaattaaccagttcaagcatgcatgttggcatatagtataagctagcacatcacaaattcacaatcaccttcaagtgtttaatttcgctgcattagctactcctttggtcttgttacgtgagagagctgacagagagtagtgtataaactctgaacaaagaactgcactttgatatggagctagctagaagatgactttgaatctgtatatatatctttgtcattgtgatatgggagaggataacttgcttaaattttatgtgagtgactgttcatagaaataaacttgacgattgtttcttgtgtgctatagcatgctgtccgaagatgcaaacatgtatatatacacattgcagtgacactctacttttacttgcacacatatgctggaccctgtgtctatacatgcatgcacatgatataatttgtctgtctatagctaatagagattggtttctacattaattgatccggtgtgtgcatgcatataatgcaggtgaagcactcctacgaggcgtacgagactctgcagcaggagctggtaacctatcaagcatttttttttcagttatagccagaaaattatttgttaattagtttctccaatgcaggctagctaatttgattgaactctactgttggatgaatgtttgaattaattcaggggttgcgcgaggagccggcgttcgggttcgtggacaacaccggcggcgggtgggacggcggcgccggcgccggcgcggcggcggacatgttcgccttccgcgtggtgcccagccagcccaacctgcacggcatggcctacggcggcaaccacgacctgcgcctcggttgatatatcatcgccgccgccgccgccgccgccggcggcctgctcgtcgccggccggccggccgccggacaccgtatcatcgctcgatctagataacaagccgacgaataaattgcagtgctcgtgttacttacctgcatgcgcatgcattattatcgatcaacgcaagaacttcatttcatttaccaaaccacttgatgtgtgctatgatccagcggttaaaccgtgtgttgtctcttgacattttgtaccagttactgatgatgttgtattatgtatgcgtggtgtgcaactgtgcttggataatttcacacttatttg</dnaseqindica> |
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