Difference between revisions of "Os01g0643300"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
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===Expression=== | ===Expression=== | ||
===Evolution=== | ===Evolution=== | ||
Revision as of 13:37, 10 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Expression
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
- Hebei Key Laboratory of Molecular and Cellular Biology, College of Life Sciences, Hebei Normal University, Shijiazhuang,Hebei 050024, China, and State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, Zhejiang 310006, China. E-mail: zhuzhengge@hebtu.edu.cn.
References
- Qian Zhang, Jingjing Li, Wenjiao Zhang, et al. The putative auxin efflux carrier OsPIN3t is involved in the drought stress response and drought tolerance.The Plant Journal, 2012, 72(5): 805-816.
Structured Information
| Gene Name |
Os01g0643300 |
|---|---|
| Description |
Similar to Auxin efflux carrier protein |
| Version |
NM_001050227.1 GI:115438824 GeneID:4326565 |
| Length |
4307 bp |
| Definition |
Oryza sativa Japonica Group Os01g0643300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:27619806..27624112 |
| Sequence Coding Region |
27619913..27621032,27621135..27621190,27621278..27621483,27622157..27622242,27622380..27622537 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:27619806..27624112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:27619806..27624112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatatccgggcacgacttctacacggtgatggcggcggtggtgccgctgtacgtggcgatgttcctggcgtacgggtcggtgcggtggtggggcatcttcacgccggaccagtgctccggcatcaaccgcttcgtcgccatcttcgccgtgccgctcctgtccttccacttcatctccaccaacgacccgtacgccatgaacctccgcttcctggcggcggacacgctgcagaagctgctcgtcctggcggggctcgccgcgtggtcgcgcctcccctcgcggaccggcgcgccgcggctggactggtccatcacgctcttctccctctccacgctgcccaacacgctcgtcatggggatcccgctgctgatcgccatgtacgggccatactccggctcgctcatggtccagatcgtcgtgctccagtgcatcatctggtacacgctgatgctcttcctcttcgagttccgcgccgcgcggatgctgatcgccgaccagttcccggacacggcggcgtccatcgtgtccctgcacgtcgacccggacgtggtgtcgctggagggcggccacgcggagacggaggccgaggtggcggcggacgggcggctgcacgtcaccgtgcgccggtcctcggtgtcgcggcggtcgctgctggtcacgccgcggccgtcgaacctgacgggagcggagatctactcgcttagctcgtcgcggaacccaaccccgcggggctccaacttcaaccacgccgacttcttcgccatggtcggcggcgggccaccgcccccgacgcccgctgcggtgcgcggctcgagcttcggcgcctccgagctctactcgctgcaatcgtcgcggggcccaaccccgaggcagtccaacttcgacgagcactcggcacggccgccgaaaccaccggcaacgaccacgggggcactcaaccacgatgccaaggagctccacatgttcgtgtggagctcgagcgcgtctcccgtctcagaagtcagcggcctgcctgtgttcagtggcggcggcggcggcggcgctctcgacgtcggcgccaaggaaatccacatggtcatccccgccgacctgccgcagaacaacggctcaggcaaagagcacgaggagtacggcgcagtggcattgggtggcggcggcggcggagagaacttcagctcgacggcggagctgcacccgaaggtcgtcgacgtcgacggaccgaacgccggcggcggcgccgcgggcgcggggcagtaccaaatgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatccgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtcgccttccggtggcacgtctccatgccagcaatcgtcgagaagtccatctccattctctcggacgcaggcctggggatggccatgtttagcctgggattgttcatggcgctgcagcccagcatcatcgcgtgtggcaaatcagccgccgtcgtctccatggccgtccgcttcctcgcgggccctgccgtcatggccgccgcgtcaatcgccatcggactccgcgggacgctcctgcacgtcgccattgttcaggcggctctaccacaagggattgtgccttttgtttttgcaaaagaatacaatgtccacccggccatcctgagcacagcggtaatttttggcatgctaatagctcttccaatcacattgctgtactacatccttcttggactatga</cdnaseq> |
| Protein Sequence |
<aaseq>MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINR FVAIFAVPLLSFHFISTNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLD WSITLFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAA RMLIADQFPDTAASIVSLHVDPDVVSLEGGHAETEAEVAADGRLHVTVRRSSVSRRSL LVTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGA SELYSLQSSRGPTPRQSNFDEHSARPPKPPATTTGALNHDAKELHMFVWSSSASPVSE VSGLPVFSGGGGGGALDVGAKEIHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENF SSTAELHPKVVDVDGPNAGGGAAGAGQYQMPPASVMTRLILIMVWRKLIRNPNTYSSL LGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAV VSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILS TAVIFGMLIALPITLLYYILLGL</aaseq> |
| Gene Sequence |
<dnaseqindica>108..1227#1330..1385#1473..1678#2352..2437#2575..2732#3822..3898#3989..4055#aagaagccactccactcggccgctcctgcatgtataactagctagttctagctcgctcaggcactcgatccaccgccgggcgcgttggattgagataggctgaggagatgatatccgggcacgacttctacacggtgatggcggcggtggtgccgctgtacgtggcgatgttcctggcgtacgggtcggtgcggtggtggggcatcttcacgccggaccagtgctccggcatcaaccgcttcgtcgccatcttcgccgtgccgctcctgtccttccacttcatctccaccaacgacccgtacgccatgaacctccgcttcctggcggcggacacgctgcagaagctgctcgtcctggcggggctcgccgcgtggtcgcgcctcccctcgcggaccggcgcgccgcggctggactggtccatcacgctcttctccctctccacgctgcccaacacgctcgtcatggggatcccgctgctgatcgccatgtacgggccatactccggctcgctcatggtccagatcgtcgtgctccagtgcatcatctggtacacgctgatgctcttcctcttcgagttccgcgccgcgcggatgctgatcgccgaccagttcccggacacggcggcgtccatcgtgtccctgcacgtcgacccggacgtggtgtcgctggagggcggccacgcggagacggaggccgaggtggcggcggacgggcggctgcacgtcaccgtgcgccggtcctcggtgtcgcggcggtcgctgctggtcacgccgcggccgtcgaacctgacgggagcggagatctactcgcttagctcgtcgcggaacccaaccccgcggggctccaacttcaaccacgccgacttcttcgccatggtcggcggcgggccaccgcccccgacgcccgctgcggtgcgcggctcgagcttcggcgcctccgagctctactcgctgcaatcgtcgcggggcccaaccccgaggcagtccaacttcgacgagcactcggcacggccgccgaaaccaccggcaacgaccacgggggcactcaaccacgatgccaaggagctccacatgttcgtgtggagctcgagcgcgtctcccgtctcagaagtcagcggcctgcctgtgttcagtggcggcggcggcggcggcgctctcgacgtcggcgccaaggaaatccacatggtcatccccgccgacctgccgcagaacaacggctcaggcaaaggtccgtcccgacattaatgccgcagtagtagtactgtcacttaatcacgggctccatgtgcaactctaaacatagaccttcccaaattttctacattttcagagcacgaggagtacggcgcagtggcattgggtggcggcggcggcggagagaacttcagcttcggaggcggcaagacggtggacggcgccgaggcagtagacgaggaggcggccttgcctgacgggctgacgaagatggggtcgagctcgacggcggagctgcacccgaaggtcgtcgacgtcgacggaccgaacgccggcggcggcgccgcgggcgcggggcagtaccaaatgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatccgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtcgccttccggtacgccgttttttctttttccctctctccgaagattaacctacctttttcacgtgacctgtgcaattactcattttttctactgcctaagttagttcgggtgataaggtgatttcactcgacagagacgacaagttcggcgaggatcgaggaccgcgatggtgttggtgatgataagcgcgagagcgatattattctcggcgaagccagagggagtgggtagcgcgtaggcggtaggctaggaagcaccgaaactgcccgggggcgtacgtgccgtggcggtgggaataaccgaaaagcagcttttttacggatccccaaacggcggtggtgggccgacgaggtgagtgagtttcccgccggcacggaccaccgccgcgggcccggtcggcaccaatcgcgaactgtaggagctgaaaaaggcagaatttgcacggcgcgcgagcactggtcgtcgtcgagccagtctaccaaacacagtcacacaatagcgtttccaagcaaggaaccatgaacgattggccccgtttcctttggagtaacctgcatctactactactactaatcatcataagagcacacctgttgttattttatcatctctagtggctaatgatgttgatatttactgttccgggagctaaccaacgggcaatgtgttcatgggtcacaggtggcacgtctccatgccagcaatcgtcgagaagtccatctccattctctcggacgcaggcctggggatggccatgtttagcctgggtgggtgcccacgccccttgtgctcatgtcttcccgtagccctacaccgcattgctccgcaattaatccctcttcacacgcactggtgcccactggcccgcgctcgagctaacgctgtcaaactgtctcgtggccaggattgttcatggcgctgcagcccagcatcatcgcgtgtggcaaatcagccgccgtcgtctccatggccgtccgcttcctcgcgggccctgccgtcatggccgccgcgtcaatcgccatcggactccgcgggacgctcctgcacgtcgccattgttcaggtaactatgggttggtttggtttgtggcctaaatacatcttactaaattttgtcaatactaaattttggcaagttttagcatgactaattttggtaaagcaaagttgtgtttggattgaagccaaaatagcctaagttcactattgaaatggcctattttttaggcatgccaaaatttggcttcaaaccaaatagacactaaatactattgaaattgataaatattggtaagcctaatttagatctcaaaccaaaccagtcctatatgcatgcatctaaaagaagttactacagtaagcaacccgtgcaaagtgataatttaatttctcccttatgccaattataaaatttggtagacaagcttatcatgtgtgggggcgtttggctttgccagcagcgtatacagggtcggggttctgatctgtcagaccctggcttatatactctgggcctgtttggcacagctccagctccacccctcctggagtcaaacagtttcagctccactagaactgagctagagctcagtcaaacagtttcagctccaccagaactgggaatggagctgggtagagttctctcacaaaataaactagagttgtggagctaggtttaggcaactccacaactccactccagactcaactcctggagttaaatttaggagttggagctgtaccaaacaggccctccgtatatatgattccatcagcttctttactggaacatatgtactccctccgtcccataataggtgacgtttttgactttttatttgcaacgtttgaccattcattttatttgaaaaatcagtgcaaatataaaaaaaagataagtcatatgtaaagtacttttgataataaagcaaatgacaaacaaaataaataataatttcaaaattttttgaataagacgaatgatcaaacattgataaaaaaactcaaaaagacaagtaatatgggacggaggtagtacttactggagtagtatcaatcattcgagcaatttatttccctgtgcattatatactactagtatatgtgaagctaatgctcattgatatatatatctgggaattcgatttgataggcggctctaccacaagggattgtgccttttgtttttgcaaaagaatacaatgtccacccggccatcctgagcacagcgtaagcaatttcctttgcttgttttgcttgctgatatttttgtttggatggtgtttatatttattctgggcaaattgtcactttttacagggtaatttttggcatgctaatagctcttccaatcacattgctgtactacatccttcttggactatgatcaagaaagcttatggacgctctcacataaaacggaagaaatgggggcaaagagagagaaaaaaaagcgatcctgtccatctcaaacagcgtatgcttatatgtatagcctgttgtcggacattgcccatgatgacaagacaacgaagttgttacagagctatatatctctgcgacatttgtacaagagataacgacagaatgtactcaaatataaccgatattagatatgtgttctgttaaagatctcaac</dnaseqindica> |
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