Difference between revisions of "Os03g0215400"
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''OsMADS1'' has global effects on transcriptional networks and hormonal signaling pathways. It also participates in modulating the expression of various shoot meristem and FM transcription factors and of auxin- and cytokinin-mediated signaling events. We find that some directly regulated transcription factors and signaling targets of ''OsMADS1'' are distinct from those of Arabidopsis SEP3. | ''OsMADS1'' has global effects on transcriptional networks and hormonal signaling pathways. It also participates in modulating the expression of various shoot meristem and FM transcription factors and of auxin- and cytokinin-mediated signaling events. We find that some directly regulated transcription factors and signaling targets of ''OsMADS1'' are distinct from those of Arabidopsis SEP3. | ||
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===Evolution=== | ===Evolution=== | ||
Revision as of 15:30, 12 June 2014
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Contents
Annotated Information
Function
MADS1，belongs to MADS box transcription factors,and mediate floral development in association with other regulators.LEAFY HULL STERILE1/OsMADS1 is required for specifying a single floret on the spikelet meristem and for floret organ development, but its downstream mechanisms are unknown. OsMADS1 is expressed in FMs, functions during FM(floral meristem) establishment and floret organ patterning, and contributes to meristem termination. OsMADS1 has global effects on transcriptional networks and hormonal signaling pathways. It also participates in modulating the expression of various shoot meristem and FM transcription factors and of auxin- and cytokinin-mediated signaling events. We find that some directly regulated transcription factors and signaling targets of OsMADS1 are distinct from those of Arabidopsis SEP3.
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os03g0215400 |
|---|---|
| Description |
Box protein (MADS box protein MADS1) |
| Version |
NM_001055911.1 GI:115451550 GeneID:4332059 |
| Length |
8500 bp |
| Definition |
Oryza sativa Japonica Group Os03g0215400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6080198..6088697 |
| Sequence Coding Region |
6080524..6080638,6081017..6081171,6081390..6081431,6081522..6081563,6081771..6081870 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:6080198..6088697 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:6080198..6088697 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggagggggaaggtggagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaacggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatcatcttctccggccgcggccgcctcttcgagttctccagctcatcatgcatgtacaaaaccttggagaggtaccgcagctgcaactacaactcacaggatgcagcagctccagaaaacgaaattaattaccaagaatacctgaagctgaaaacaagagttgaatttcttcaaaccacacagagaaatattcttggtgaggatttgggcccactaagcatgaaggagctggagcagcttgagaaccagatagaagtatccctcaaacaaatcaggtcaagaaagaaccaagcactgcttgatcagctgtttgatctgaagagcaaggagcaacagctgcaagatctcaacaaagacttgaggaaaaagttacaggaaaccagtgcagagaatgtgctccatatgtcctggcaagatggtggtgggcacagcggttctagcactgttcttgctgatcagcctcatcaccatcagggtcttctccaccctcacccagatcagggtgaccattccctgcagattgggtatcatcaccctcatgctcaccatcaccaggcctacatggaccatctgagcaatgaagcagcagacatggttgctcatcaccccaatgaacacatcccatccggctggatatga</cdnaseq> |
| Protein Sequence |
<aaseq>MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVA LIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFL QTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQD LNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQ IGYHHPHAHHHQAYMDHLSNEAADMVAHHPNEHIPSGWI</aaseq> |
| Gene Sequence |
<dnaseqindica>8060..8174#7527..7681#7267..7308#7135..7176#6828..6927#6646..6707#5803..5875#88..272#aggtagccaaaccacaccaccataaagctagcttgcaaaggggatagagtagtagagagagagagagaggagaggaggaggaagaagatggggagggggaaggtggagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaacggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatcatcttctccggccgcggccgcctcttcgagttctccagctcatcatggtacgtatagcaccaaaccaacgccgccgccgccgccggcgtgcttgttccggcgcagcagcgcatcatcatcgatcgatctaagtctaataagataatcaattaaccctaactaaataaaatgataagaacagtatatatggttatgatcagtgaaacactcgtcgatctgagggaaaatccggtcgagatcgagggagtggggagacaaattgaactgcaggctagctaatttaatcgtgtcgatcgatttctagcttttgttgatctttatatatacgaacgcatgcactttcccctttgtttttttttcccttcgatctgcttggagctcatatgctatagatcttggggcatatgtatctgtcagctttcgagagcggctatgtccatcgatccctcttttttttctctttctttttgtagtatcagctgccatgcatatatcagatttcgttttcgcgtgcttttagtgcttcacttatctgttcgccatatctgatttcttctcatcctttgccgacgtcgtctgagcagtctgacctccaagatctggcgaaataaacctcaatcgttgctatttcttgccttgaatctgcataaacatgacaatagatccttctattttttttcttcaagacaagatcttgctgtttcttcccttgctatttttcattcaaagattcttcttttttttctaaaagaactatatatatatgaatcgagtttcatcttcatcgatctgtctctctccttttgttttctgtaaacacacacacgagcgtacgtatatatactctcatctctacttttatcaaaaagaaacacacatgttctagcttcagatcccaaaataatcaaacaggaaaatatatataatatgcaattagttcagatcccgaggtagatttcttgattatttccattttccaaagtgaggcgcgcgacaactcgacgcggttcctctttgcacacacacacagtataactgtacgcaaggggtaagaacaaaggagcaatcccttctgggttgctgcttgcttctcccatttttagctatttcagaatttcactttctgagactcatctctctctctctaccagctgcattatttcacttcccttttttcccatttctgcctattacacggatggcctctttgtggactcgtccaaattgaggcacggtagctggtgtcaaaatgaacctgcaggcccagcccggttatgtatatgtatagctatatagcttttcttgcaagaggtatatacactttgtagttttagccagtggtccagctagccatggatggatatattatacacacgtatatatagtacatgtatgtacgagtgttaattaaactcgtttagttaatttccaaagtccttttttattactacagctagcctgatctgtgttttagtgtgttactgttccattagttactgttctattgaagagagcgcgtacacgttgttgttttatttctctttttccgatccggtgttccttttttttttcttttggtcatcttcctcgagtcccgagcagtagaaatactactactgccctgcaaagcacacacatcaagtgatgtgtttttcttcagagcttcagacgtgtcatatcaagcaggtcagcacgcattacatgcaatataatactcctatatggacacgcagaactcactttgatcatgtgtgaccaagctggatgagccgttaatttgttgttgggacagggtattgaatcattaattgcggtttttcctctttttcctgtcttgttctactcagagaattgaacggtgaactgtataggcagagctagtcctgcatgcatcggttttctgaaattattaactatacacacacatgcacaattgctaaatctggtatacatgtcttgctgactcacatattcgttcctcctaattaaagcactcatttatttattttacacggttttcaatgatatactttaaatattaatttgtttgatgttatatttctatgaatatgaaattagcatcatatgaaaatactttaaaacaaatatagtgatataacatgcataatacttagcatatacttgtatgattagcatggtcattaatcaaaagttgccgagcttgaattttctaaaggacagggtgccttgtaatttgggacaaagaaccattggaaaacgaacacaaagaaactttcattacattaattatctgaaaaagaaagaaactttcattaacctcgtacagtaaatagaaaagaggaactatgcatgtataacgaaatagctaggatcacagcaattaattagttgttctctggctttacttttcttttggagtaactttaatttttctttggaggatgaagtagttaattatacaggtttccaattcttgtttggtagatccttttttatgttcctggaagagctactatatttttgtacttgagatggagctgaggtaccgttatctagctatgtcgcatctcaaggagttacgaattaacatatatcaccaatatcacaaaaatgctccatacaaaaagatcataaaaattcttgaatttgcttgctgtgtttttttactatatatgcttggaattaaaaaaatgactgaattaatcgtttgcaatctttaacggtgcgtgcagtaccaaattggaaaggtatccacttgttcaaacttaaaaatattttttttactgatattactctctaaaaaggtgcatgggaaatgctattggaactactagttttcgggacattataagaaaatgtatgcatatatatatatatatatggacttatgatatgggccagatacctatatatatagaagatatatgtgtgctactacctccattcaacaatacaagcatttgagccagttctggtcaaggatataaacatcctgcactattagcttgtacttgtcaaattaatgatctctaattcaaactttcttgctactttacccccaatcacccttcccaaccatcttaatctttgctaaacattctagaaatgcttattgttggatggaggaagtagctattaactactcctatagtttttttaactacctcatattaattttgtaatcctaataaatgcactatatatgcccacttttaccgtgtttccaaactggcatcaagctaaaatgaatgttaatttagtttccccataattttatgagaatcgcaaaattgtacctattttaaacaaatcaaagtcactgaacaaatgaacggaggttaattattatattcacctgatataggcagactaggttgggctaagagggacattaatttgggcatctaggttttgaaatgggagatatggagagtgaaccaaaaaaaaactgttagtgaattagtacatgatatatactagtattattagtgggaacctagagaaatgcaaagaatgttgcgcaaatcatcattttgtgtaaattaaaatgggatatacactatggggaactatagctgagtgtcaatccccaccttttgtttgtaattaaacatgtgtttatgctacaaattactccctccgtactcataaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaattatgaataactctcaagttgttgagtttgaaaatgtaaaaaatatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatattttatagaaacaagaagtcaaaattgtgttttggagaccgtgtcactgtccaaaacgacttctttacgagtacggagggagtatgttctacatattggctaatattgttgaacccttcggatcaatcttagacacagtagccattttacccactgatgcagcaacccaattaggtatctactaattagcatcatagtgcaaatttgtacttttcaagtggaaaatagaaattatttgtcctcctttactttaatttcttgataatatgatatatgtaacataatttctctttgctcccaagcatataaaaaacttcaatttgatatgtccaaaaaatgtcatatatatagcatgtaatcctctgtggcaaacacgtttttttggctcaaattaagaagaggaaaaaatggtatatatgtataaacctaacaaaaatgccccaacaagaatagctttattttgtgaacaaggtcatatagaccagggaacaaaaaccctgtactgtgcttctattttgctatgcattttggataagtgattctacagaaatatgactatataggagatattctcaaatctgatcttttctattaattagcccatacgatatgaagacatatcttcctctgttctgattctatttgttgtgctaagatagtctacaggatttgctaggttgccacctgccgtcaacaaaattcagctcatcagattttgttatagttgctagcacagttatattatacgtatatctcttttgagaatatattattacagtccattgatttttcttgtagagtggaaaatattattgtgttttctaaccgtaggagttcatgtggtgttatttattttggataatgtggtgtatttttatgagaaatc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