Difference between revisions of "Os01g0188400"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GeneName = Os01g0188400|
 
Description = NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME)|
 
Version = NM_001048792.1 GI:115434997 GeneID:4326769|
 
Length = 5294 bp|
 
Definition = Oryza sativa Japonica Group Os01g0188400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:4738276..4743569|
 
CDS = 4738519..4738607,4738700..4738828,4738921..4739011,4739103..4739177,4739360..4739437<br>,4739529..4739618,4739742..4739840,4739934..4739987,4740084..4740131<br>,4740232..4740330,4740458..4740541,4740650..4740721,4740812..4740907<br>,4741012..4741077,4741148..4741253,4741350..4741501,4741634..4741708<br>,4741792..4741912,4742968..4743209,4743328..4743381|
 
GCID = <gbrowseImage1>
 
name=NC_008394:4738276..4743569
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:4738276..4743569
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgctgtccgcgcgcgccgccgccaccgccgccgccgccgccgcctccccgctgtggaagcgcggcgagggtggcagcagcgggagcgggagcggatgcacgagctgcagggaggtgcggaggagggccgcggcggtgagggtccgtgcggcggcgccgaggagggtggaggcggtcgcgatggagtccgcggcggagaccgagaagaaggaggaggttgcggcggccggcggcggggttgaggacatggctaccgaggaggtgcccgtcacgccatgggccttctccgtcgcgagtggttacacccttttgagggatccacatcacaacaagggccttgcctttagtgagaaggagcgggatgctcattacttacgtggccttcttcctccggcagttgtgtctcaggatcttcaagtgaagaagatcatgcataatcttcgccagtacagtgtacctttgcagcgttacatggccatgatggatctccaggagaggaacgagaggctcttctacaagcttttgattgataatgtggaggagcttctccctgtggtgtatacaccaacagtaggtgaggcctgccagaagtatgggagcatatttagacaaccacagggtctctatgtcagcttgaaggacaagggaaaggttcttgatgtgctaaggaactggccagagagaaacattcaagttattgttgttactgatggtgagcgcattttggggcttggagatttgggttgtcagggaatgggtattcctgttggtaaactttctctgtacactgcccttggaggagttcgcccgtcagcttgtttacctatcacgattgatgttggtacaaacaatgagcaattgttgaatgatgaattctacattgggctccggcaaaggcgtgctactggcaaggagtaccatgagctcatggaagaatttatgagtgccgttaagcaaatctatggtgagaaagttctgatacagtttgaggacttcgccaatcacaacgcatttgatttgcttgcaaaatacagcaagagtcatcttgttttcaatgatgatatccagggaacagcatctgtggtccttgcaggtcttttatcatcactaaaggtggttggtggaaccctggctgaacacacttatttgttccttggtgctggtgaggctggaactggtattgcagaactcattgctcttgagatttcaaaacagacaaaggctccaattgaggagtgccgcaagaaggtttggctgctggattcaaaggggttgatcgttaactcacgaaaagaatccctccaggcatttaaaaagccttgggcacatgagcatgaacctgtaacgacactgttagatgctgtccagtccatcaaacctactgtgctgattggaacatccggagttggcaaaacttttactaaagaagttattgaggccatggcttcctttaacgagcgacccgtcattttctctctgtcaaaccccacatcacactctgagtgtactgctgaagaagcatataattggagccagggtcgtgcagtatttgccagcggcagtccgtttgaccctgtggagtacaatggaaagatacatgtgccaggccagtcgaacaatgcctacattttccctggattcggcctcggtgtcgtaatctctggagctgtccgtgttcacgaggatatgcttctagctgcctcggaaacactagctgatcaggccactcaggagaactttgagaagggatcgatcttcccgcccttcacaaacatcagaaagatttctgctcgcattgccgcaagcgtggctgcaaaagcctatgaacttggactggcgacccggctgcctcaacccagggatctggagaaatacgcagagagctgcatgtacacccccgtataccgcagctaccggtaa</cdnaseq>|
 
AA = <aaseq>MLSARAAATAAAAAASPLWKRGEGGSSGSGSGCTSCREVRRRAA                    AVRVRAAAPRRVEAVAMESAAETEKKEEVAAAGGGVEDMATEEVPVTPWAFSVASGYT                    LLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAM                    MDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV                    LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPI                    TIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFAN                    HNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGT                    GIAELIALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTT                    LLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAY                    NWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLA                    ASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEK                    YAESCMYTPVYRSYR</aaseq>|
 
DNA = <dnaseqindica>4963..5051#4742..4870#4559..4649#4393..4467#4133..4210#3952..4041#3730..3828#3583..3636#3439..3486#3240..3338#3029..3112#2849..2920#2663..2758#2493..2558#2317..2422#2069..2220#1862..1936#1658..1778#361..602#189..242#ccgacggcctcgtccacgtcacgtgtgccgcgccaccctccgcaacgcaacccccttccttttttataccggcctcctccctcccattacccccctcacgcgctcgcttcctcttccccccagccatcggcgacgcgaggacgcgacgcgccccaccaaccaccaccgcctccgccgacctcgccgccatgctgtccgcgcgcgccgccgccaccgccgccgccgccgccgcctccccgctggtacgtactcccctcgagcgaggagtttgcttgtgtggttttggggggttttggggtggggggggggggggatacgaacgaacgagcgtgacgtgtttgtgtttttgtgcctctgcagtggaagcgcggcgagggtggcagcagcgggagcgggagcggatgcacgagctgcagggaggtgcggaggagggccgcggcggtgagggtccgtgcggcggcgccgaggagggtggaggcggtcgcgatggagtccgcggcggagaccgagaagaaggaggaggttgcggcggccggcggcggggttgaggacatggctaccgaggaggtgcccgtcacgccatgggccttctccgtcgcgaggtgagcggtgctcgaatcggatcggatcgccgtgggggggctggatcttggtggggtcgcggcggacgttacgatgcgtcgatctgaagcacttttttggggatttttttttgccgatttagctcagcttgcgcgttgatctgggttaggtatacggtttcgcccgcgtgataaatattctaatccgttttggaattttgacgtgcctagaagtgaggatgcgtcgccttctcgcagctcggtttgttttgttgcttgtttgctcgaatcgtgctaaatctcgaatttgtgttgatccagtcgatttctttgtcgtgtggcagttgccaaagctgaatctgtccctttcatttgtttgtttgcgtaatttaccgcagccttctcctcacgaagaaacatattacaatcagttcagctcaaatttgttttcttctttcttgcctcaagtcagcggattatacggttcttattttttttacagtatattcattttattcgcagaatatcggtttcaaaaaaaaaaattcgcagaatattactgttggtgttttttttttttgataatttatactgctggagtaatctgaactgggttaatgttggatggattttgagtaggtcccgggtagctgagaaaaaaagatttgattgttttcttctactagtagctttttatatttcctgcactcctgtgggtggggtatattctaatctggcccatgccatgccaatattgtctgtctttgttttctccgccatcccttgacaatgaaatttagctggaaattaattataaatttaacacacatgtgctgagttatataacaataattatcacctagatcgtaaaatacagctgagaacagtaacttacagcaagtactgcaaaacaccaatttaggcactcataaggagaatcgtgctactatagaatgttggcctggcagtttttttttcatacgaataagtggccataattttgtgcactgagaactgatttatttcgttcaccatgctgaaatggagttgctgatgtaattgatcttgtgcaacagtggttacacccttttgagggatccacatcacaacaagggccttgcctttagtgagaaggagcgggatgctcattacttacgtggccttcttcctccggcagttgtgtctcaggatcttcaagtacgagctacatcaataagcaactataacctgtttatcactctgtggcgtttattttaagccctccttaatgttttgtgcaggtgaagaagatcatgcataatcttcgccagtacagtgtacctttgcagcgttacatggccatgatggatctccaggtaatccaaattaatcttttttacctgatgacttcttgaatgatttacaatttaacaaaaatgactgggcattgggcaatgtggaggaacagcatgttgaagatatgataataatacctttgtgtttatcaggagaggaacgagaggctcttctacaagcttttgattgataatgtggaggagcttctccctgtggtgtatacaccaacagtaggtgaggcctgccagaagtatgggagcatatttagacaaccacagggtctctatgtcagcttgaaggacaagtatgtttgcctagctttgcttgaatatccaagaatagtgtgttgattttattctctctacctattcgatttggactgactggaagtgcattctaggggaaaggttcttgatgtgctaaggaactggccagagagaaacattcaagttattgttgttactgatggtgagcgcattttggggcttggagatttgggttgtcaggtatgattgtctgattagttgcttacttcagaaactttacttattgttgttgcaatgatctttcctacagggaatgggtattcctgttggtaaactttctctgtacactgcccttggaggagttcgcccgtcagctgtaagcattcatatccattacattatggtttcggctgtttctaccagaaaactgtaaaaacagccaaatcatctgaatttgcaaattgcacttttactttgtagtgtttacctatcacgattgatgttggtacaaacaatgagcaattgttgaatgatgaattctacattgggctccggcaaaggcgtgctactggcaaggtaccaccaaaaagggtttgcttggagtaatgaaggtgttgtataaattgacaacttaagatctgaaccttgtcttgtccttgatggcaggagtaccatgagctcatggaagaatttatgagtgccgttaagcaaatctatggtgagaaagttctgatacaggtctgccccagcctcatagtaaaatatatttttattatttgatcttttcattgttttcataatagacataatataagggctaatgaaactgaatcttccttgtgccagtttgaggacttcgccaatcacaacgcatttgatttgcttgcaaaatacagcaagagtcatcttgttttcaatgatgatatccaggtaaatgaaccacttgtgttgtttgagccatgatatttttagtttcaccacaatatattcttatagaataaatttccactgttctgtttgttgccctctaaattaaaccaaaatgtatggattgcagggaacagcatctgtggtccttgcaggtcttttatcatcactaaaggtggttggtggaaccctggctgaacacacttatttgttccttggtgctggtgaggttggtcaagatttctcttatcggcttattgtaatctttgctcaactgttgaaacatgacgtaatccctgaaacacataacatgatgcatttgcatgcaggctggaactggtattgcagaactcattgctcttgagatttcaaaacaggtaatatagtgtttcacaatctaactgctgtactgttataataattcattatggtacttacggcttataactttgctggtctcaattggttttcagacaaaggctccaattgaggagtgccgcaagaaggtttggctgctggattcaaaggtatagaaccaaaaggaatagaatgctgttaatgcaacatttcacctctgcatccaacagttttaacaccatacaatttgtgctattttgtaggggttgatcgttaactcacgaaaagaatccctccaggcatttaaaaagccttgggcacatgagcatgaacctgtaacgacactgttagatgctgtccaggtattcatctgatgcacatccaagatttattcaattattagctgatggttttgccgaaacttgtgctgtttatgcttgttttcttgtatcctaatggttaatgtttacctattctttctgtagtccatcaaacctactgtgctgattggaacatccggagttggcaaaacttttactaaagaagttattgaggccatggcttcctttaacgaggttagttggacatctttgtcgtcaagttgtaactttgtggtatttaccagatgattggctaacttctgatattggaaatcccaaaatgcagcgacccgtcattttctctctgtcaaaccccacatcacactctgagtgtactgctgaagaagcatataattggagccaggtgagctgcaaatctgtacttgttgagcatctggcattatgaactcactgttttaaatcctatgccatttgactaccaacttttactaaagagacatcgtgctatgcatatttagcacaaaaaaatgattttgtaaaacgtgataatgcataactcatgatgatccatccgtatccttgcagggtcgtgcagtatttgccagcggcagtccgtttgaccctgtggagtacaatggaaagatacatgtgccaggccaggtactgcttccttgcttaaatacttattccaagagacagcaaagccaaaatagaaattgactgttactaattgattcgctattcacaacagtcgaacaatgcctacattttccctggattcggcctcggtgtcgtaatctctggagctgtccgtgttcacgaggatatgcttctagctgcctgtaagtactcagtcgaatgtttgctcaaatccgaaacagttatgacgcgtaccgcagtactacaccagaactaattccattctcgtaaacagcggaaacactagctgatcaggccactcaggagaactttgagaagggatcgatcttcccgcccttcacaaacatcagaaagatttctgctcgcattgccgcaagcgtggctgcaaaagcctatgaacttggtatgtcgtttactctagtcacactttccacgaccatccaggtcctgtgccaaaaaaccgtggcctctgacacggccaatcgttctgtgcaggactggcgacccggctgcctcaacccagggatctggagaaatacgcagagagctgcatgtacacccccgtataccgcagctaccggtaacgccgcggaggtcaaattttgcagtaataaaacctaccaatgcagtaggggatactgctatgttgtgttgccattgtcgccgttggccgttgctgctgcaaggcattgtatctgtctatataaatcacctgttgtaacgttatggaagcaatctccatgtgtaccaccagtgtttcattctttgatcgattataaagagtgcaataagaacatagttttagctcccattgtaatgggcagcat</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048792.1 RefSeq:Os01g0188400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 04:35, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information