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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0329300|
| |
| − | Description = Virulence factor, pectin lyase fold family protein|
| |
| − | Version = NM_001049456.1 GI:115436325 GeneID:4326983|
| |
| − | Length = 2789 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0329300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:12844403..12847191|
| |
| − | CDS = 12844443..12845666,12845758..12845925,12846072..12846116,12846218..12847060|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:12844403..12847191
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:12844403..12847191
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggggccaacggcgagcgcggctgcacgccggagcacgcggcaaccgtcgacgatgacgacgacaatgtcgcgtcgcacggcggcggcggtggccgtgtccgtggtgctcctcctcctctcgtcgtgtctcccttgttgctcggaggcaaggctgcactaccaccggaggcagcaccggagggcgccgcaccgcgggcaccaccgcgcggcggcggcggcggcggcggcgacgaacggcggcagccacatctctcagccgcccgccgcgctgcctcccgacttcgacagcggggaatcgccggcggagacgccgggcttgcctccggctggcgtcgaggacgctccgccgcggcgatctccgcgtgagaagccgtgcccgacgatgcagcctcccgtcaagccgccggaggagttgtcgccggtgggcgcgccgaggtcgcgcgttcgggccatgccaccgtcaccctcgctgtcgccgccggccaaggcgccgtcacattctcacgctaagacgccgtcgatgccgccggcggagcggccggcgcttcctcccaccaaggcgccggcggcgatctcgccggccacgccacctcaactctccccagcgaacgcacattcgacgcaccatcacgcgaagccaccgtcattgcctccggccgagccaccagtgccctcgccgtcgccggagcatccaccgcggcactccccgtcaaagccaccggcgtacgctccggccaagccaccgacagcactacgtccggcgatccctccggccgcaatgccaaagccaccgtcagtcgctccggtgcagccaccgcagcggccgcctgccccggcaacaaagccaccgccgtcgtttccaccgcagctcgccccgacgatgccaccaccggcgcacgcgccggcggagacaccagcaccaccaacaacgccaccggcgctgccaccggccacgacggcgccatcaccgaagaacagctcatcatcaccacctccaccctgcaccggcggcggcggcggcatcagcaacgtgttcgacgtgagggcgttcggcgcgacgggcaacggctcgagcgccgacggcgacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcggcggagtccgccaccgtgctcgtgccgtccgacggcgtgttcaccatcacctccaccatcttcgccgggccatgcaagccaggcctcaccttccaaatcgacggcgtgctgatgccgccggacgggccggcgagctggccggcggcggacggccggcggcagtggatcgtcttctacagggccgacgggatgacgctgtccggcaagggcaccatcgaaggcaacggcgaggagtggtggaatctcccgtgtaaacctcacaggggccccaatggatcgaccctacccggcccatgtgagagccctgcactgatcaagttcgtggcgagcagcgacgtgagcgtgcagggcctgaggatggagaacagcccgcagttccacctcaagttcgacgggtgcagccgggtgctggtcgacggcctcgtcgtcagctcgccggcgtcgagcccgaacaccgacggcgtccacgtcgagaacacgagctccgtccggatcctcaactccaggatcagcaacggcgacgactgcgtcagcatcggcggcggctgctcgggggtgcgcgtcgagaacgtcacgtgcgtgcacggccacggcatcagcatcggcggcctgggcgcgcgcggcgcgcgggcgtgcgtgtcgaacgtgaccgtgcgcggcgcgcgcgtcgtcgactccgacaacggcgtgcggatcaagacgtggcagggcggcgccgggtcggtgtcgggggtggtgttcgacgccgtccagatggtgaacgtcaggggctgcatcgtcatcgaccagtactactgcgatgcgcacggcggcgccggcgccggctgcgccaaccagaccgccgccgtgcgcgtcgacggcgtcgcgtacagggggatccgcggcacgtacaacccgcgcggcggcggcggcgcgccggtgcgcttcgcgtgcagcgacaccgtcgcctgcacgggcatcaccatgaccgacgtcgagctgctgccggccggcggcggcgacgaaggcggcggtgccagcgccggcgcgaagctggccgacccgtactgctggaacgcgtacggggtgatggagacgctgacgcagccgccggtgcactgcctgcaggaaggtcgcccagagtcgctgcaagatcagctcgcaagctgctga</cdnaseq>|
| |
| − | AA = <aaseq>MGPTASAAARRSTRQPSTMTTTMSRRTAAAVAVSVVLLLLSSCL PCCSEARLHYHRRQHRRAPHRGHHRAAAAAAAATNGGSHISQPPAALPPDFDSGESPA ETPGLPPAGVEDAPPRRSPREKPCPTMQPPVKPPEELSPVGAPRSRVRAMPPSPSLSP PAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPATPPQLSPANAHSTHHHAKPPSLP PAEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRP PAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNSSSSPPPP CTGGGGGISNVFDVRAFGATGNGSSADGDTRAFRAAWKAACSAESATVLVPSDGVFTI TSTIFAGPCKPGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRADGMTLSGKGTIEG NGEEWWNLPCKPHRGPNGSTLPGPCESPALIKFVASSDVSVQGLRMENSPQFHLKFDG CSRVLVDGLVVSSPASSPNTDGVHVENTSSVRILNSRISNGDDCVSIGGGCSGVRVEN VTCVHGHGISIGGLGARGARACVSNVTVRGARVVDSDNGVRIKTWQGGAGSVSGVVFD AVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVRVDGVAYRGIRGTYNPRGGGGAP VRFACSDTVACTGITMTDVELLPAGGGDEGGGASAGAKLADPYCWNAYGVMETLTQPP VHCLQEGRPESLQDQLASC</aaseq>|
| |
| − | DNA = <dnaseqindica>41..1264#1356..1523#1670..1714#1816..2658#aagcagcgctagctccacccagctaggccgtacgtcggcgatggggccaacggcgagcgcggctgcacgccggagcacgcggcaaccgtcgacgatgacgacgacaatgtcgcgtcgcacggcggcggcggtggccgtgtccgtggtgctcctcctcctctcgtcgtgtctcccttgttgctcggaggcaaggctgcactaccaccggaggcagcaccggagggcgccgcaccgcgggcaccaccgcgcggcggcggcggcggcggcggcgacgaacggcggcagccacatctctcagccgcccgccgcgctgcctcccgacttcgacagcggggaatcgccggcggagacgccgggcttgcctccggctggcgtcgaggacgctccgccgcggcgatctccgcgtgagaagccgtgcccgacgatgcagcctcccgtcaagccgccggaggagttgtcgccggtgggcgcgccgaggtcgcgcgttcgggccatgccaccgtcaccctcgctgtcgccgccggccaaggcgccgtcacattctcacgctaagacgccgtcgatgccgccggcggagcggccggcgcttcctcccaccaaggcgccggcggcgatctcgccggccacgccacctcaactctccccagcgaacgcacattcgacgcaccatcacgcgaagccaccgtcattgcctccggccgagccaccagtgccctcgccgtcgccggagcatccaccgcggcactccccgtcaaagccaccggcgtacgctccggccaagccaccgacagcactacgtccggcgatccctccggccgcaatgccaaagccaccgtcagtcgctccggtgcagccaccgcagcggccgcctgccccggcaacaaagccaccgccgtcgtttccaccgcagctcgccccgacgatgccaccaccggcgcacgcgccggcggagacaccagcaccaccaacaacgccaccggcgctgccaccggccacgacggcgccatcaccgaagaacagctcatcatcaccacctccaccctgcaccggcggcggcggcggcatcagcaacgtgttcgacgtgagggcgttcggcgcgacgggcaacggctcgagcgccgacggcgacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcggcggagtccgccaccgtgctcgtgccgtccgacggcgtgttcaccatcacctccaccatcttcgccgggccatgcaagccaggcctcaccttccaagtaaaaatatatataatcacgaacacacgccttgtccccgatttccatcaacttccttccccattgattaacccgtgacgtgtcgcggcagatcgacggcgtgctgatgccgccggacgggccggcgagctggccggcggcggacggccggcggcagtggatcgtcttctacagggccgacgggatgacgctgtccggcaagggcaccatcgaaggcaacggcgaggagtggtggaatctcccgtgtaaacctcacagggtacgtaattaaccaaccttaatctcgtgacacgacacgcttaatttcatctttgtaattagccgaccttaatctcgtgacatgagtgacacgcctatttttttctgtcagagagtacacactgactgtttcgtgtctatgttcagggccccaatggatcgaccctacccggcccatgtgagagccctgcagtaagtacactacaaatcgcattagctgcagtaatttaattattgagattgattaatcgagtgttaatcctagataaagtgagatatgttgtactgtgcagctgatcaagttcgtggcgagcagcgacgtgagcgtgcagggcctgaggatggagaacagcccgcagttccacctcaagttcgacgggtgcagccgggtgctggtcgacggcctcgtcgtcagctcgccggcgtcgagcccgaacaccgacggcgtccacgtcgagaacacgagctccgtccggatcctcaactccaggatcagcaacggcgacgactgcgtcagcatcggcggcggctgctcgggggtgcgcgtcgagaacgtcacgtgcgtgcacggccacggcatcagcatcggcggcctgggcgcgcgcggcgcgcgggcgtgcgtgtcgaacgtgaccgtgcgcggcgcgcgcgtcgtcgactccgacaacggcgtgcggatcaagacgtggcagggcggcgccgggtcggtgtcgggggtggtgttcgacgccgtccagatggtgaacgtcaggggctgcatcgtcatcgaccagtactactgcgatgcgcacggcggcgccggcgccggctgcgccaaccagaccgccgccgtgcgcgtcgacggcgtcgcgtacagggggatccgcggcacgtacaacccgcgcggcggcggcggcgcgccggtgcgcttcgcgtgcagcgacaccgtcgcctgcacgggcatcaccatgaccgacgtcgagctgctgccggccggcggcggcgacgaaggcggcggtgccagcgccggcgcgaagctggccgacccgtactgctggaacgcgtacggggtgatggagacgctgacgcagccgccggtgcactgcctgcaggaaggtcgcccagagtcgctgcaagatcagctcgcaagctgctgagcagtagcagacatgacatgcctcttcttttgacaatagatttcttctccgcgattcatgctaatctatagattttctttctcaacgattaactataactaacttttgagtcatccagactccagagttcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049456.1 RefSeq:Os01g0329300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
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