Difference between revisions of "Os02g0824000"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
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GeneName = Os02g0824000|
 
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Description = Tetratricopeptide-like helical domain containing protein|
 
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Version = NM_001055107.1 GI:115449872 GeneID:4331201|
 
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Length = 5139 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0824000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
 
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AP = Chromosome 2:36284819..36289957|
 
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CDS = 36284819..36284826,36285145..36285424,36286219..36286260,36286910..36286985,36287322..36289957<br>|
 
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GCID = <gbrowseImage1>
 
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name=NC_008395:36284819..36289957
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008395:36284819..36289957
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggcgcccccgcctgaatccgaaaccctccgcctccacgcctccttcctctgctccctcgccatcgccctcctccgcgccggccgcctctccgccgcctcccacctcctctcctccctcccctcccctcccgcccccctcctcctccgccgcctcatccccgccctcgccacctccggcctcgccgccgccgccatccgcttccgccccgccgaccccgcctccctcaacgccctcctctactcccactgccgcctccgcctgctccgccccgccatcgcgctcctccgctcctctcgcccgaccaccgtcgcctacaacatccttctcgccgccctctccgaccatgcccatgcccccgcggtgctcgccgaaatgtgcaagcgcggggtgccgttcgacggggtcaccgtcaacactttgctcgctgggctctgcaggaatggccaggtcgacgcggcggcggccctggccgacaggggcggagggatccacgccttggatgtcatcggctggaacactctcattgctggatattgcagggttggggacacgcccgcagcattgtccgtggccgacaggatgacggcacaggggctgccaatggatgtggtgggctacaataccttggttgccgggttctgccgcgccggccaggttgatgctgcgcggggcgtgctggacatgatgaaggaggcaggggttgatccgaatgtggcgacctacacacccttcattgtgtactactgcaggacgaaaggggtcgaggaggcattcgatttgtatgagggaatggtcaggaatggagtgctgctggatgtggtcacgcttagcgctctcgttgctggactttgtagggatggccgcttctcggaggcgtatgctcttttcagggagatggacaaggttggggctgcgccaaaccatgtcacctactgtacgcttattgactcgctggcgaaagctgggaggggcaaggagttgctcagcctgttgggggagatggtttctagaggcgtggtcatggatttggtcacctatactgctttgatggactggttgggtaaacaaggcaagactgatgaagtaaaggacacacttcgttttgctctttcagataatctctcccccaatggtgttacatacactgtattgatcgacgctctctgcaaagctcacaacgtcgatgaggcagagcaggtgttgctggaaatggaggagaaatcgatcagtccaaatgttgttacgttctcatcggtcatcaacggctttgttaaaagaggattgcttgacaaagcaactgagtataagaggatgatgaaggaaaggggcatcaatccaaatgtggtgacctacggaacacttattgatggtttcttcaagttccaagggcaagatgcagctcttgaggtgtaccatgacatgctatgtgagggtgtcaaggtaaataaattcattgttgattctctggtgaatggtttgagacagaacggaaaaatagaggaagccatggcattgttcaaagatgcgagtgggagtggcctgtcactagatcacgtaaactataccactttaatagatgggctcttcaaagcaggcgacatgcctactgcttttaagtttggtcaggagttaatggacagaaacatgttgcccgatgcagttgtttataatgtgtttatcaattgcctttgcatgcttgggaagtttaaggaagcaaaatccttcttgacagagatgagaaatatgggattaaaacctgatcaatcaacatataacactatgattgtttcgcattgcaggaaaggagagactgctaaagctctaaaactccttcatgaaatgaagatgagctccataaagcctaacctcatcacatacaacacactggttgctggtctctttgggactggggcagtggagaaggcaaagtatttgctaaatgagatggtctcagctggattctctccatcctctctgactcatcgacgggttttgcaagcatgttcacaaagcaggaggttggatgtgattctggatattcatgaatggatgatgaatgctgggcttcatgctgatatcaccgtatacaatacgcttttgcaagttctgtgttaccatggcatgacaagaaaagccacagttgttctggaagaaatgttggggagtggaattgccccagacacaatcacattcaatgctcttattcttggtcattgcaagagcagccatctagataatgcatttgctacatatgctcagatgcttcaccaaaacatttcaccaaatatagctactttcaacacgcttctgggtggtcttgagtctgttggaaggatcggagaagcaggcaccgtgctcattgagatggagaagagtgggcttgaacccaataatctcacctatgacatactggctacaggacatggaaaacaaagcaacaaagtcgaagcaatgagattgtattgtgaaatggtgggaaagggctttgttcctaaagtaagcacttataatgctcttataagtgacttcactaaagcaggaatgatgactcaagctaaagagctcttcaaggatatgcaaaagagaggtgttcatcctacatcctgtacttatgatatccttgtaagtggatggtatgatcttgcaagagagcagaaatcccagaatacatattttacggaaatatactgcttcagtgcatctagacatcaatcaaagattgccatatccagggtcaatcttgcattgcagttcatgtctttgtatttgaatggaccaaaaatgaattggctgaacggacttcagcaattttattcacttctttatggccaatacaaggtcagtatactgagggggagtgatacttttccaggtcactgcttaagcaatgagatattaaagatggtgatcaaaccaatttttgtgcatgtactgctgcaagttcatatgaacacagaagttaacttcattgatattgtttgtgcctatcaggttattgcacaaaacatttaccaagccaaggaaaaaggagatcgctga</cdnaseq>|
 
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AA = <aaseq>MAPPPESETLRLHASFLCSLAIALLRAGRLSAASHLLSSLPSPP                    APLLLRRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSRPT                    TVAYNILLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR                    GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG                    QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT                    LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE                    MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA                    HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV                    TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK                    DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM                    LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL                    ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH                    EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC                    KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN                    NLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL                    FKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYCFSASRHQSKIAISRVN                    LALQFMSLYLNGPKMNWLNGLQQFYSLLYGQYKVSILRGSDTFPGHCLSNEILKMVIK                    PIFVHVLLQVHMNTEVNFIDIVCAYQVIAQNIYQAKEKGDR</aaseq>|
 
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DNA = <dnaseqindica>5132..5139#4534..4813#3698..3739#2973..3048#1..2636#atggcgcccccgcctgaatccgaaaccctccgcctccacgcctccttcctctgctccctcgccatcgccctcctccgcgccggccgcctctccgccgcctcccacctcctctcctccctcccctcccctcccgcccccctcctcctccgccgcctcatccccgccctcgccacctccggcctcgccgccgccgccatccgcttccgccccgccgaccccgcctccctcaacgccctcctctactcccactgccgcctccgcctgctccgccccgccatcgcgctcctccgctcctctcgcccgaccaccgtcgcctacaacatccttctcgccgccctctccgaccatgcccatgcccccgcggtgctcgccgaaatgtgcaagcgcggggtgccgttcgacggggtcaccgtcaacactttgctcgctgggctctgcaggaatggccaggtcgacgcggcggcggccctggccgacaggggcggagggatccacgccttggatgtcatcggctggaacactctcattgctggatattgcagggttggggacacgcccgcagcattgtccgtggccgacaggatgacggcacaggggctgccaatggatgtggtgggctacaataccttggttgccgggttctgccgcgccggccaggttgatgctgcgcggggcgtgctggacatgatgaaggaggcaggggttgatccgaatgtggcgacctacacacccttcattgtgtactactgcaggacgaaaggggtcgaggaggcattcgatttgtatgagggaatggtcaggaatggagtgctgctggatgtggtcacgcttagcgctctcgttgctggactttgtagggatggccgcttctcggaggcgtatgctcttttcagggagatggacaaggttggggctgcgccaaaccatgtcacctactgtacgcttattgactcgctggcgaaagctgggaggggcaaggagttgctcagcctgttgggggagatggtttctagaggcgtggtcatggatttggtcacctatactgctttgatggactggttgggtaaacaaggcaagactgatgaagtaaaggacacacttcgttttgctctttcagataatctctcccccaatggtgttacatacactgtattgatcgacgctctctgcaaagctcacaacgtcgatgaggcagagcaggtgttgctggaaatggaggagaaatcgatcagtccaaatgttgttacgttctcatcggtcatcaacggctttgttaaaagaggattgcttgacaaagcaactgagtataagaggatgatgaaggaaaggggcatcaatccaaatgtggtgacctacggaacacttattgatggtttcttcaagttccaagggcaagatgcagctcttgaggtgtaccatgacatgctatgtgagggtgtcaaggtaaataaattcattgttgattctctggtgaatggtttgagacagaacggaaaaatagaggaagccatggcattgttcaaagatgcgagtgggagtggcctgtcactagatcacgtaaactataccactttaatagatgggctcttcaaagcaggcgacatgcctactgcttttaagtttggtcaggagttaatggacagaaacatgttgcccgatgcagttgtttataatgtgtttatcaattgcctttgcatgcttgggaagtttaaggaagcaaaatccttcttgacagagatgagaaatatgggattaaaacctgatcaatcaacatataacactatgattgtttcgcattgcaggaaaggagagactgctaaagctctaaaactccttcatgaaatgaagatgagctccataaagcctaacctcatcacatacaacacactggttgctggtctctttgggactggggcagtggagaaggcaaagtatttgctaaatgagatggtctcagctggattctctccatcctctctgactcatcgacgggttttgcaagcatgttcacaaagcaggaggttggatgtgattctggatattcatgaatggatgatgaatgctgggcttcatgctgatatcaccgtatacaatacgcttttgcaagttctgtgttaccatggcatgacaagaaaagccacagttgttctggaagaaatgttggggagtggaattgccccagacacaatcacattcaatgctcttattcttggtcattgcaagagcagccatctagataatgcatttgctacatatgctcagatgcttcaccaaaacatttcaccaaatatagctactttcaacacgcttctgggtggtcttgagtctgttggaaggatcggagaagcaggcaccgtgctcattgagatggagaagagtgggcttgaacccaataatctcacctatgacatactggctacaggacatggaaaacaaagcaacaaagtcgaagcaatgagattgtattgtgaaatggtgggaaagggctttgttcctaaagtaagcacttataatgctcttataagtgacttcactaaagcaggaatgatgactcaagctaaagagctcttcaaggatatgcaaaagagaggtgttcatcctacatcctgtacttatgatatccttgtaagtggatggtcaaggattcgaaatggaactgaggtgaaaaaatgtctcaaagatatgaaagaaaaaggattcagtccatctaaaggcactcttagttttatatgcagagcattctcaaaaccaggaatgacatggcaagctcaacgtttacttaaaaacctttacagagtttaaaatgcgaagtttggtctcttatctaccagatatagatgtttctttatcttgtcagggtggtcagtagtgctgattgaatgattctattgtctaatcctcgacaagcgttttggctctctgaaaagtttgttgcagtaatctcatagggtggcatgtttgaaatgtggcaggtatgatcttgcaagagagcagaaatcccagaatacatattttacggaaatatactgcttcagtgcatctagacatgtaagtggccgggcagtctcatcacttggagaatgatttggtggcaagtaccatttactacaaactaaatgtacgtgaggttaaaggatgtgtaacacatgttacactgcagacattcttgcacagttgcatccacaacccagatggaggaaaagatgttccagttggaaaagaaaatactgtgctctttgaaatatcagtgctaaatttggatagactaagaactccttagcaataattgttgctgcaggtacaaatacaaatattcttatagtttatgcaatttgttgttggggtcttggggaggtggaactctacacattgatttgccaaatgatgccttgctggtttatgctcacttgggcattctatttgccaaaaatgatgctttactggtttctgcccacttgggccttctagatgtcttttgaatttctgctatgaagtagttgttacctgcaaaaatatttcttttctttactgcaaataattttctagtactatgaggaaagtgatgatgtttgttgcaccatgagtagcctttggacattttttgaaacgaagatccctttcatatttaaacataacaacagctgctaggtgaacttttgctatatttttttgttgagaacttctaatctgctattagcaatcaaagattgccatatccagggtcaatcttgcattgcaggtcatactttactagatgctgttctttttccatgaaggtctggttatatctgtggtcctgtgaaaaccttaattttccttatagtcctttatgttttgccattgcatttcagagttgctttgaaatcctatgcctagctggatcataattggtgatagtgaagatggttcatgatcctgcagtggagacctttgcatacttgtgttgcctggcctggaccacaggattatcagtgggactggtggagtcctgataacagctgaactcttcaggtagtcatgtttttgtgtaatatctaatccaaccaaccccatttttggtgtcatatggtttcactgttatctgaactgaatggaaagaaaaaaaagggaaatatgacaacttatcttgtctgttactctatattagtttctttgcctacaaaatgaaccagctataagtggattatctgtttggttcttacacatttgttttgtgttgaattaggtggtagtgtggtgtatcatgaatgttgagtccaggaaaaacaaaaccaaatatattttatgaaatatttagttgcaatgtttttccacataacaaacattgatactcaggggtacagttattcaaagttaaaatgttttttcgcaacactttgctacaaagaagcgattttgtattttctgtgcatatgtgtgcctacattgccatagtaaaagcagaggataagttatcatcctaacaccataccatgtaatttggatcttggctgaaatatttcagatttgttgcaacaatatgaaattttccagttcatgtctttgtatttgaatggaccaaaaatgaattggctgaacggacttcagcaattttattcacttctttatggccaatacaaggtcagtatactgagggggagtgatacttttccaggtcactgcttaagcaatgagatattaaagatggtgatcaaaccaatttttgtgcatgtactgctgcaagttcatatgaacacagaagttaacttcattgatattgtttgtgcctatcaggttattgcacaaaacatttaccaagccaaggaaaaaggaggtatgtttacttctatctgttctgtgcattcagtcatccaaagctttccatgtatttggccatgtttgatccacagcatgctctattcgatgacatttagatttttatgtgggttaatatttgttcactctgctgtttccacctggtctttatcttgccagatgaagcccatgcgaaaatgccaattgtgcccagactacatagaccccacacaaataattgttaaaaccagataagagtaactgacttgtgaaccacaaaaccccttggtccctcccattctagttgactagttctagggtatatccgtacatgcagatcgctga</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001055107.1 RefSeq:Os02g0824000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 2]]
 
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[[Category:Chromosome 2]]
 

Latest revision as of 06:55, 14 May 2015

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Annotated Information

Function

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Structured Information