Difference between revisions of "Os04g0112300"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
GeneName = Os04g0112300|
 
Description = Eukaryotic initiation factor 3, gamma subunit family protein|
 
Version = NM_001058572.1 GI:115456873 GeneID:4334938|
 
Length = 6475 bp|
 
Definition = Oryza sativa Japonica Group Os04g0112300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
 
AP = Chromosome 4:706362..712836|
 
CDS = 706674..706781,707255..707341,707431..707536,707619..707727,707800..708062<br>,708542..708635,709385..709509,709667..709708,710856..710926<br>,711013..711094,711191..711311,712438..712559,712650..712747<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008397:706362..712836
 
source=RiceChromosome04
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008397:706362..712836
 
source=RiceChromosome04
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggcggcgattccccgggaggcatgggagggctgcagcgtcctcctcgacatcaacgacggcgaccgcctcgccttcttccgcctcacccccgccgcgacggtcaaggtggggaacaggacctgctcgctgcagccgctcgtcggtcgccccttcggctccctcttcagcgtcggcccctccggcctcgtcccctgcgccgacgccccatcttctcgcgatgatacaacgcaagatgctgctgatggtccctcgcaggatgaaactagggacaatagatctcttgtcgataataatacagcacagaatttatctagcgatgacatagaggcaatgaagagagatggtgtaagtggtgatgagattgtagaagctttgatagcaaatagctccacatttgggaagaagacccttttttcccaagagaaatacaaactaaagaaacagaagaaatatgcacccaaagtgcttttacggcgcccctctacccgaagcatttgtgagacatatttcaagaaaagcccagctcgaacagggtttatgcgagttgatgcactgtccctcttgttgtctatggcaaatgttggtccatattcggatgtccttgtggttgatatggttggaggtttagtagttggagctgtagctgaacgcttaggaggtactgggtatgtttgcagcacatatcttggatctgctgctagctccatagacattataaggatgtataatttgagcagtgacatgactaccaggattgttcaggcaccactaagtgacctctgctccttgcaaaactctgtcgatgtgtcttctggtcttaatgatagcattcagggtgaggcacaagagcccactgcagtaccagtggagaatactcagccatctgtaccacaaccaactgacacagcagtaccagatgagaaaacacagtcacctaaagaacaatctattgatatagatatccctgagcccttattggatgagcacattaatcaggatggcaattcttctttagatagtaaaggagatgaggatggaagttcaataggtcccaaatcactcaaggcaggaaaggcaccatcaccagagaggatgaaatattggagtgaacatggatttagcagtttgattgttgctgctccggggcatgatgttgaaagttttgttgctgatctgcttcccctcttgtcttattcagctccatttgctatctatcaccaataccttcagcctctcgcaacatgcatgcacagcttgcaagtatcaaaaatggctctcggattacaaatttctgaaccctggcttcgtgaataccaggtccttccatcacgaactcatccacacatgcaaatgaatgcatttggtggttatattttgagtggcattaggatacacaatggcgatgcatgtaatggaagcaagtga</cdnaseq>|
 
AA = <aaseq>MAAIPREAWEGCSVLLDINDGDRLAFFRLTPAATVKVGNRTCSL                    QPLVGRPFGSLFSVGPSGLVPCADAPSSRDDTTQDAADGPSQDETRDNRSLVDNNTAQ                    NLSSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRR                    PSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAER                    LGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTRIVQAPLSDLCSLQNSVDVSSGLND                    SIQGEAQEPTAVPVENTQPSVPQPTDTAVPDEKTQSPKEQSIDIDIPEPLLDEHINQD                    GNSSLDSKGDEDGSSIGPKSLKAGKAPSPERMKYWSEHGFSSLIVAAPGHDVESFVAD                    LLPLLSYSAPFAIYHQYLQPLATCMHSLQVSKMALGLQISEPWLREYQVLPSRTHPHM                    QMNAFGGYILSGIRIHNGDACNGSK</aaseq>|
 
DNA = <dnaseqindica>6056..6163#5496..5582#5301..5406#5110..5218#4775..5037#4202..4295#3328..3452#3129..3170#1911..1981#1743..1824#1526..1646#278..399#90..187#acctctccctaaaaccctcccctctccatctctcctctgcttcgtctctcctctcctctccgccgctgcatcccctccaaaaataaaaaatggcggcgattccccgggaggcatgggagggctgcagcgtcctcctcgacatcaacgacggcgaccgcctcgccttcttccgcctcacccccgccgcgtccgcacctcccttcctcctcgacctcgcgtctcctcccttcccccccaaaaaccctagacctgatttccctctcttccggtcgtgcaggacggtcaaggtggggaacaggacctgctcgctgcagccgctcgtcggtcgccccttcggctccctcttcagcgtcggcccctccggcctcgtcccctgcgccgacgccccatcttctcgcggtatgcaatgcccgatgggggtgatttcctttttgtactgcttgtttgctcctgcattcgctgtgggctagacccgcacagtactgaacgagtgctcagaactgaactaattgctagtagtagtgaatacttgaagcaggggattgtcatttgacttgatgtcgtattgttcactagtttagtttagttatttctttgtctgcaatcagccgaacttgtatcggtttatagcttatacaggagttagatttggtgaaacgttatgtaaattgtgagttcatctgtagtttgcactcttcttcagttcttttccttccttttcttttcttttttacatcacctttcatccagcttcaccctatataggatggtgacttcttaattaggctctagttgtttcagaatttcagggctggtgtgcatatgttggactgtgatgtgtcaattgtcattgcttatagtctgctaagattttgatttaatgatgggttctagttaccaaatgtacaaatgtggaccttaacacatgcactgtagttaccaaggcatgatttcacattgttcagttctctcttttggcaggcagcacatagaatttgttgggttgtttcacaaggaatttcatagctcccatggaaaaaaaataacatatacatttgcaaggtgacatccatgtgcagttgtatctaataaagccaccgtttccataacgcaagcaatatctggaaaatagtataatcgaagaatttaaatttattatgttaaaccattttctaagaaaactaaagtatgagttaaaacatgccttgtttcatcaggacacattccctctcatcaggacaccaatttgtttcaaaattgtaatcaagttctattcccttccacacgttccctctcttcttacttccactgttccacatttaggacgaatggtggtggtggtgcaattgagaaaaagtactctcaaagtcaattagcttatcctttttaaaaaaatgtcctgctacaaatattgttctagttgagttatcttacacatggtttttgatcagttcgtgtactcatcgatatagttcatagtttgtactatttcttgtttgtaacaatggttcccatttacacatagatgatacaacgcaagatgctgctgatggtccctcgcaggatgaaactagggacaatagatctcttgtcgataataatacagcacagaatttatctagcgatgacatagaggcaatgaagaggtgagggttcagttatctttgagtaagctatgcttgattgttttgtgtaaatgattccaaatcatgatttatgtactgtttgattgtccaaaacagagatggtgtaagtggtgatgagattgtagaagctttgatagcaaatagctccacatttgggaagaagacccttttttcccaagttagtataatttgttgtctagttgcttcattactttttttctaagaacactggggattgaattggttcaataattctgattacaggagaaatacaaactaaagaaacagaagaaatatgcacccaaagtgcttttacggcgcccctctacccgaaggtaatccttctatcgtttccttgtagttgggaatatgctatatcattctagaaatgaatattatctattcacattttatcatttagagaatcatcttttaccctcttaatttaactgcaaggttgcatatccactttaagccccatttggaacacaggaatttcacaacatctttttgcagaaatttcaattggaaacagtttgaatagcaggaacagaaaattgtccgggttcgaaataagtccctatgctgaatatgtgattgaagtttgtgaaacagctttttaaaattatcgtgtcaatggaagattgcttcagattaggagtatagcacaaccaggaaaacaatctttgtttttattataaattttccacttgattgaatgaaatatgctctgctcccattatgtttagtactccctccgtattttaatgtatgatgtcattgactttttgaacaatgtttgaccattcgttttattcaaattttttgtgtaaatatgaaaatatttataccatcttaaataacatttaatgatgaatcaagtcacaataaaataaataataactacataaattttttgaataagacgaatggtcaaacgttggataaaaagtcaactgcgtcatacattaaaatatggaggtagtaattagtacttttgttgtttgaatgtcactgtagcctctaaaatacaaaacaaggtgctaatcagttcttctctttatgacctatttactcctctttaatgtagctccaacaggaagcaccaagtccacccacaaattcaatttttgttcctaatgccagtaagaataaagcacatcgaagggaaaaaagactacctaagaaagcctaaaaaacatctgttgagaacaagaccaagtttttttaacatcatcttaaagataatgggagtatgatgcttgttggctttttgatatttttttctcctcattaccaatgcaaaatataatatcaaatgaagtgttttttcaagaaagttgccctgaatgcctgatcttgaactaactccttacatctgatctgtgaaatgcgttgcacattacaatttgattgccagatgcttatctagaaggtgcgcatatttatctgaccctttcttttttcctttcaatgctgcagcatttgtgagacatatttcaagaaaagcccagctcgaacagggtaaatattttgctagttcatttgcaatcccttattggcattgccattatactccatttcagtattacttttggctcatatgcatataccttgcttttctaaaacaagcaaattacacatagcacaacccttagttactatattctttcctttctaggtttatgcgagttgatgcactgtccctcttgttgtctatggcaaatgttggtccatattcggatgtccttgtggttgatatggttggaggtttagtagttggagctgtagctgaacgcttaggaggtaacatattcctactttttttattttactgataccagtagattaaattacatgtacattaacaaatttaatataattcaaccgtacgcatgtatatgcctcatgtaatagcttttgctgaaaatgcattactctttacctgcttgtttttgagaatgctagattgctagttctactcaccataacttcagtcagtggacgtagaaatgtcatttattttagttggtgtattcaataacaagtgatatgcatgtagttatctattccttaagtcacactgcctgttgctacaagcgctcaatgtatattcactatgtacagaagctacaggcacccatgaacttgaaacgtgctcatatatattcatatacgaattagaactgattttcaggtttttctaagcatctctattataatgcatctatttgttagttgccactatcacagtgcctgctattgtgagggatgttgtataaatattttagaagatcttaaattaaaatgccaaatttttgaataaaaagattgaaattgtatacacaggattgtatgagatcaatcagacacctatatacacgtatgcagataattcaattttatttataaatctttcaaagcacacctgtacatgtattcagctgcaaaatgtcttctggagtggggatggctgtactctcgtagagtactatgacccccaaagctgcttttatgagtaaagattatttttagtgattttctctgtattacaggtactgggtatgtttgcagcacatatcttggatctgctgctagctccatagacattataaggatgtataatttgagcagtgacatgactaccaggtaatttctttatttagcattatgtggattttctgatgataaaagaagttttaattagagggctcctgaaataaatatgtgctaattttacatctatactggattatgttaaggaaatagtaaaaagtgcaaaatggttatatatttttctagctatgcagttcttacacaactattgcttattgaatcgtggttgcatttctcagatataatacaatacactgtctttcacttcttgtatcatgaaataatctttgttcttgagcaattagggcgaactataatattacttatatgttcatctaattttataccatgattagtgccatgtagaactattatattctcatttgaacttatagaggtccatgtgaagcctttgaagttattactaaagtaggaaacacccattatgttgttgaagtggtgcttaagagttgggctatagcaggtaatattttgataagcttacctttcaggattgttcaggcaccactaagtgacctctgctccttgcaaaactctgtcgatgtgtcttctggtcttaatgatagcattcagggtgaggcacaagagcccactgcagtaccagtggagaatactcagccatctgtaccacaaccaactgacacagcagtaccagatgagaaaacacagtcacctaaagaacaatctattgatatagatatccctgagcccttattggatgagcacattaatcaggatggcaattcttctttaggtaagcaactgatagcactaacatgaaaaaagtatacatttgtgacttatttgatgctgtgttggtctgtagatagtaaaggagatgaggatggaagttcaataggtcccaaatcactcaaggcaggaaaggcaccatcaccagagaggatgaaatattggagtgaacatggatttagcaggtaacactgtaaattattgttgaagaaaactgcactaatagctacatattctcattgataaactgatttcatgttgatgcagtttgattgttgctgctccggggcatgatgttgaaagttttgttgctgatctgcttcccctcttgtcttattcagctccatttgctatctatcaccaataccttcaggtaaatctttcttagcttcaattttttttaatcatgatttctgcttcctatgtaaaatatgtgtgtgtttttctattgccttcatgcagcctctcgcaacatgcatgcacagcttgcaagtatcaaaaatggctctcggattacaaatttctgaaccctggcttcgtgaataccaggtcagtgctctgctcagtacattagcaatgaggaagttagacctgaaattgttgttcctgagttatggcatggtttttcttaccaatgtgcacataaccaaagactatttcacaagttatgtttagctggcagctaaattgcaaagagtaaattgaatatttgaaagtacatatggaattgtcaaggctattctaatagggctggttacaatgcaaattccttttgtcattctactatgcatgatatgcccactaactttgcttataacaatagcatcaacatatttagaaacagattttatttactattatatgagacacaagaaagataaggttattgctttgacatgatgacatccaacaaatcttttatcgcttttccggttttcgcagaatttttattttactgctgtccacaacttctaagaaatagctgttggaacttattacggtattccctttccttgttacaggtccttccatcacgaactcatccacacatgcaaatgaatgcatttggtggttatattttgagtggcattaggatacacaatggcgatgcatgtaatggaagcaagtgaatgaccaagcccgtcaatgcgtgcttctatccttggaattaaaatatggtcaccattttacacggtaacctgaaacaatagacacaattttgtagtccagagaagccaacttttatgctgaagcgacttatgtgattagtagaaattggtgcgcatatagagaataactagtgcgagttctagaagaaaatgaaatgagcatgtacaccaaatccatgtagcttacataacaatgttgtgtttgtttatcaaccaaattgaaacgcttgtggactttgagatatttgttaaggtgtgctacttactatttgt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058572.1 RefSeq:Os04g0112300]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 4]]
 
[[Category:Chromosome 4]]
 

Latest revision as of 07:45, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information